FFCP PHASE1:Hg19::chr19:35773423..35773440,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57817 | |EntrezGene=57817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15598 | |HGNC=15598 | ||
|TSSclassifier=strong | |||
|UniProt=P81172 | |UniProt=P81172 | ||
|association_with_transcript=13bp_to_ENST00000222304,NM_021175,uc002nyw.2_5end | |association_with_transcript=13bp_to_ENST00000222304,NM_021175,uc002nyw.2_5end | ||
|cluster_id=chr19:35773423..35773440,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_HAMP_5end | |description=CAGE_peak_1_at_HAMP_5end | ||
|id=chr19:35773423..35773440,+ | |id=chr19:35773423..35773440,+ | ||
|ontology_enrichment_celltype=CL:0000473;3.60e-19;39!CL:0000234;3.60e-19;39!CL:0000860;1.06e-16;33!CL:0002057;1.06e-16;33!CL:0000235;1.25e-10;6!CL:0000576;4.96e-10;48!CL:0000766;1.55e-07;69 | |ontology_enrichment_celltype=CL:0002009!2.48e-24!65;CL:0000557!3.49e-23!71;CL:0002194!5.40e-23!63;CL:0000576!5.40e-23!63;CL:0000040!5.40e-23!63;CL:0000559!5.40e-23!63;CL:0000766!2.30e-21!76;CL:0000839!2.40e-21!70;CL:0002057!7.71e-18!42;CL:0000860!6.35e-16!45;CL:0000763!5.37e-14!112;CL:0000049!5.37e-14!112;CL:0000738!4.32e-08!140;CL:0002031!6.23e-08!124;CL:0002087!3.67e-07!119 | ||
| | |ontology_enrichment_celltype_v019=CL:0000473;3.60e-19;39!CL:0000234;3.60e-19;39!CL:0000860;1.06e-16;33!CL:0002057;1.06e-16;33!CL:0000235;1.25e-10;6!CL:0000576;4.96e-10;48!CL:0000766;1.55e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.86e-23,61;CL:0002194,7.54e-23,59;CL:0000576,7.54e-23,59;CL:0000040,7.54e-23,59;CL:0000559,7.54e-23,59;CL:0000557,1.57e-21,67;CL:0000839,1.34e-20,66;CL:0000473,3.86e-20,48;CL:0000234,3.86e-20,48;CL:0000766,4.40e-19,72;CL:0000860,1.80e-13,42;CL:0002057,1.80e-13,42;CL:0000763,1.11e-10,108;CL:0000049,1.11e-10,108;CL:0000235,1.25e-10,6;CL:0002031,1.68e-07,120;CL:0002087,5.32e-07,115 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.10e-11;82!CL:0002057;1.30e-10;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000073;3.22e-21;53!UBERON:0002616;3.22e-21;53!UBERON:0002780;2.62e-19;41!UBERON:0001890;2.62e-19;41!UBERON:0003528;5.33e-18;34!UBERON:0002020;5.33e-18;34!UBERON:0001893;1.72e-17;34!UBERON:0002791;4.58e-17;32!UBERON:0001869;1.28e-16;32!UBERON:0000125;1.30e-14;9!UBERON:0002308;1.30e-14;9!UBERON:0002420;1.51e-14;9!UBERON:0007245;1.51e-14;9!UBERON:0010009;1.51e-14;9!UBERON:0010011;1.51e-14;9!UBERON:0000454;1.51e-14;9!UBERON:0007023;1.32e-12;114!UBERON:0000955;1.37e-12;68!UBERON:0002619;1.86e-12;22!UBERON:0001017;2.25e-12;75!UBERON:0009663;1.19e-11;7!UBERON:0004732;5.88e-11;13!UBERON:0000956;1.60e-10;25!UBERON:0000203;1.60e-10;25!UBERON:0001016;2.29e-10;83!UBERON:0002298;3.44e-10;6!UBERON:0001950;3.83e-10;20!UBERON:0004733;8.28e-10;12!UBERON:0002028;8.28e-10;12!UBERON:0000349;1.70e-08;5!UBERON:0001894;5.17e-08;7!UBERON:0002784;3.24e-07;4!UBERON:0000369;3.74e-07;4!UBERON:0002435;3.74e-07;4!UBERON:0000204;3.74e-07;4!UBERON:0000200;5.82e-07;6 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.14e-60!115;UBERON:0001049!2.31e-36!57;UBERON:0005068!2.31e-36!57;UBERON:0006241!2.31e-36!57;UBERON:0007135!2.31e-36!57;UBERON:0002616!1.18e-30!59;UBERON:0003080!9.52e-28!42;UBERON:0002780!5.66e-27!41;UBERON:0001890!5.66e-27!41;UBERON:0006240!5.66e-27!41;UBERON:0000955!5.72e-26!69;UBERON:0006238!5.72e-26!69;UBERON:0003075!6.77e-26!86;UBERON:0007284!6.77e-26!86;UBERON:0001017!3.82e-25!82;UBERON:0005743!3.40e-24!86;UBERON:0002346!7.06e-24!90;UBERON:0000073!2.86e-21!94;UBERON:0001016!2.86e-21!94;UBERON:0002405!3.98e-21!115;UBERON:0002020!4.07e-21!34;UBERON:0003528!4.07e-21!34;UBERON:0001893!9.69e-21!34;UBERON:0002791!7.22e-20!33;UBERON:0000062!1.22e-19!511;UBERON:0001869!5.70e-19!32;UBERON:0002371!9.73e-19!80;UBERON:0003056!5.63e-17!61;UBERON:0001474!2.48e-16!86;UBERON:0002619!5.73e-15!22;UBERON:0002390!5.90e-15!102;UBERON:0003061!5.90e-15!102;UBERON:0002193!1.29e-13!112;UBERON:0001950!5.12e-13!20;UBERON:0000153!1.18e-12!129;UBERON:0007811!1.18e-12!129;UBERON:0000956!1.86e-12!25;UBERON:0000203!1.86e-12!25;UBERON:0004765!2.44e-12!101;UBERON:0001434!2.44e-12!101;UBERON:0000033!3.14e-12!123;UBERON:0000025!8.40e-12!194;UBERON:0000467!2.49e-11!625;UBERON:0000480!3.11e-11!626;UBERON:0002308!4.46e-11!9;UBERON:0000125!4.46e-11!9;UBERON:0002420!5.00e-11!9;UBERON:0007245!5.00e-11!9;UBERON:0010009!5.00e-11!9;UBERON:0010011!5.00e-11!9;UBERON:0000454!5.00e-11!9;UBERON:0000468!2.36e-10!659;UBERON:0000922!2.97e-10!612;UBERON:0000923!9.52e-10!604;UBERON:0005291!9.52e-10!604;UBERON:0006598!9.52e-10!604;UBERON:0002532!9.52e-10!604;UBERON:0002050!1.17e-09!605;UBERON:0005423!1.17e-09!605;UBERON:0002298!1.23e-09!8;UBERON:0003076!1.27e-09!15;UBERON:0003057!1.27e-09!15;UBERON:0004111!1.76e-09!241;UBERON:0004732!2.50e-09!13;UBERON:0009663!6.46e-09!7;UBERON:0004121!1.14e-08!169;UBERON:0004733!1.81e-08!12;UBERON:0002028!1.81e-08!12;UBERON:0007277!1.81e-08!12;UBERON:0001871!2.96e-08!7;UBERON:0000924!4.27e-08!173;UBERON:0006601!4.27e-08!173;UBERON:0001894!6.74e-08!7;UBERON:0006222!6.74e-08!7;UBERON:0000477!2.04e-07!286;UBERON:0000200!5.74e-07!6 | |||
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| ||
|short_description=p1@HAMP | |short_description=p1@HAMP | ||
}} | }} |
Latest revision as of 11:21, 17 September 2015
Short description: | p1@HAMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HAMP_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 13bp_to_ENST00000222304, NM_021175, uc002nyw.2_5end |
EntrezGene: | HAMP |
HGNC: | 15598 |
UniProt: | P81172 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 2.86e-23 | 61 |
monopoietic cell | 7.54e-23 | 59 |
monocyte | 7.54e-23 | 59 |
monoblast | 7.54e-23 | 59 |
promonocyte | 7.54e-23 | 59 |
granulocyte monocyte progenitor cell | 1.57e-21 | 67 |
myeloid lineage restricted progenitor cell | 1.34e-20 | 66 |
defensive cell | 3.86e-20 | 48 |
phagocyte | 3.86e-20 | 48 |
myeloid leukocyte | 4.40e-19 | 72 |
classical monocyte | 1.80e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.80e-13 | 42 |
myeloid cell | 1.11e-10 | 108 |
common myeloid progenitor | 1.11e-10 | 108 |
macrophage | 1.25e-10 | 6 |
hematopoietic lineage restricted progenitor cell | 1.68e-07 | 120 |
nongranular leukocyte | 5.32e-07 | 115 |