FFCP PHASE1:Hg19::chr20:61273815..61273833,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28231 | |EntrezGene=28231 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10953 | |HGNC=10953 | ||
|TSSclassifier=strong | |||
|UniProt=C9JL32 | |UniProt=C9JL32 | ||
|association_with_transcript=-5bp_to_ENST00000370512_5end | |association_with_transcript=-5bp_to_ENST00000370512_5end | ||
|cluster_id=chr20:61273815..61273833,+ | |||
|description=CAGE_peak_2_at_SLCO4A1_5end | |description=CAGE_peak_2_at_SLCO4A1_5end | ||
|id=chr20:61273815..61273833,+ | |id=chr20:61273815..61273833,+ | ||
|ontology_enrichment_celltype=CL:1000497;1.04e-08;17!CL:0002518;1.04e-08;17!CL:1000507;5.40e-08;10!CL:1000494;5.40e-08;10!CL:1000449;1.01e-07;15 | |ontology_enrichment_celltype=CL:0000066!5.84e-12!254;CL:1000497!9.78e-07!18;CL:0002518!9.78e-07!18 | ||
| | |ontology_enrichment_celltype_v019=CL:1000497;1.04e-08;17!CL:0002518;1.04e-08;17!CL:1000507;5.40e-08;10!CL:1000494;5.40e-08;10!CL:1000449;1.01e-07;15 | ||
|ontology_enrichment_disease=DOID:8692;3.58e-14;31!DOID:1240;1.01e-13;39!DOID:2531;4.98e-12;51!DOID:0060083;4.98e-12;51!DOID:299;6.64e-08;25!DOID:0050687;5.00e-07;143!DOID:305;7.88e-07;106 | |ontology_enrichment_celltype_v019_2=CL:0000066,9.04e-15,253;CL:1000497,1.23e-08,17;CL:0002518,1.23e-08,17;CL:1000507,7.68e-08,10;CL:1000494,7.68e-08,10;CL:1000449,1.28e-07,15 | ||
|ontology_enrichment_uberon=UBERON:0002113;2.89e-09;24!UBERON:0011143;2.89e-09;24!UBERON:0000489;1.75e-08;29!UBERON:0006554;3.34e-08;30!UBERON:0001008;3.34e-08;30!UBERON:0004211;5.40e-08;10!UBERON:0009773;5.40e-08;10!UBERON:0001231;5.40e-08;10!UBERON:0004810;5.40e-08;10!UBERON:0006555;1.01e-07;15!UBERON:0004819;1.01e-07;15!UBERON:0001285;1.01e-07;15!UBERON:0007684;1.01e-07;15!UBERON:0001737;5.41e-07;9!UBERON:0001557;5.41e-07;9 | |ontology_enrichment_development_v019=UBERON:0008947;4.93e-08;29 | ||
|ontology_enrichment_disease=DOID:162!7.94e-34!235;DOID:14566!6.27e-33!239;DOID:0050687!8.01e-22!143;DOID:305!1.64e-18!106;DOID:2531!1.62e-15!51;DOID:0060083!1.62e-15!51;DOID:0050686!5.15e-15!137;DOID:1240!1.64e-14!39;DOID:8692!1.17e-12!31;DOID:299!9.42e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.58e-14;31!DOID:1240;1.01e-13;39!DOID:2531;4.98e-12;51!DOID:0060083;4.98e-12;51!DOID:299;6.64e-08;25!DOID:0050687;5.00e-07;143!DOID:305;7.88e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.40e-41,235;DOID:14566,2.44e-40,239;DOID:0050687,1.20e-25,143;DOID:305,2.07e-22,106;DOID:0050686,1.08e-18,137;DOID:2531,2.34e-18,51;DOID:0060083,2.34e-18,51;DOID:1240,5.80e-17,39;DOID:8692,1.43e-14,31;DOID:299,7.41e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0002113!2.27e-07!27;UBERON:0003918!2.27e-07!27;UBERON:0005095!2.27e-07!27;UBERON:0007687!2.27e-07!27;UBERON:0001041!3.29e-07!98;UBERON:0005177!3.68e-07!107;UBERON:0000489!6.33e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.89e-09;24!UBERON:0011143;2.89e-09;24!UBERON:0000489;1.75e-08;29!UBERON:0006554;3.34e-08;30!UBERON:0001008;3.34e-08;30!UBERON:0004211;5.40e-08;10!UBERON:0009773;5.40e-08;10!UBERON:0001231;5.40e-08;10!UBERON:0004810;5.40e-08;10!UBERON:0006555;1.01e-07;15!UBERON:0004819;1.01e-07;15!UBERON:0001285;1.01e-07;15!UBERON:0007684;1.01e-07;15!UBERON:0001737;5.41e-07;9!UBERON:0001557;5.41e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,9.66e-09,26;UBERON:0003918,9.66e-09,26;UBERON:0011143,9.66e-09,26;UBERON:0005095,9.66e-09,26;UBERON:0007687,9.66e-09,26;UBERON:0005177,1.35e-08,101;UBERON:0000489,4.77e-08,31;UBERON:0004810,7.68e-08,10;UBERON:0004211,1.28e-07,15;UBERON:0009773,1.28e-07,15;UBERON:0001231,1.28e-07,15;UBERON:0001285,1.28e-07,15;UBERON:0007684,1.28e-07,15;UBERON:0004208,1.28e-07,15;UBERON:0005172,4.30e-07,54;UBERON:0005173,4.30e-07,54;UBERON:0001737,5.17e-07,9;UBERON:0006555,9.21e-07,16;UBERON:0004819,9.21e-07,16 | |||
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| ||
|short_description=p2@SLCO4A1 | |short_description=p2@SLCO4A1 | ||
}} | }} |
Latest revision as of 11:09, 17 September 2015
Short description: | p2@SLCO4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLCO4A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000370512_5end |
EntrezGene: | SLCO4A1 |
HGNC: | 10953 |
UniProt: | C9JL32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.04e-15 | 253 |
kidney cell | 1.23e-08 | 17 |
kidney epithelial cell | 1.23e-08 | 17 |
kidney tubule cell | 7.68e-08 | 10 |
nephron tubule epithelial cell | 7.68e-08 | 10 |
epithelial cell of nephron | 1.28e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
kidney | 9.66e-09 | 26 |
kidney mesenchyme | 9.66e-09 | 26 |
upper urinary tract | 9.66e-09 | 26 |
kidney rudiment | 9.66e-09 | 26 |
kidney field | 9.66e-09 | 26 |
trunk region element | 1.35e-08 | 101 |
cavitated compound organ | 4.77e-08 | 31 |
nephron tubule epithelium | 7.68e-08 | 10 |
nephron epithelium | 1.28e-07 | 15 |
renal tubule | 1.28e-07 | 15 |
nephron tubule | 1.28e-07 | 15 |
nephron | 1.28e-07 | 15 |
uriniferous tubule | 1.28e-07 | 15 |
nephrogenic mesenchyme | 1.28e-07 | 15 |
abdomen element | 4.30e-07 | 54 |
abdominal segment element | 4.30e-07 | 54 |
larynx | 5.17e-07 | 9 |
excretory tube | 9.21e-07 | 16 |
kidney epithelium | 9.21e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.40e-41 | 235 |
disease of cellular proliferation | 2.44e-40 | 239 |
cell type cancer | 1.20e-25 | 143 |
carcinoma | 2.07e-22 | 106 |
organ system cancer | 1.08e-18 | 137 |
hematologic cancer | 2.34e-18 | 51 |
immune system cancer | 2.34e-18 | 51 |
leukemia | 5.80e-17 | 39 |
myeloid leukemia | 1.43e-14 | 31 |
adenocarcinoma | 7.41e-08 | 25 |