FFCP PHASE1:Hg19::chr1:29063119..29063144,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51441 | |EntrezGene=51441 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31675 | |HGNC=31675 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5A9 | |UniProt=Q9Y5A9 | ||
|association_with_transcript=0bp_to_ENST00000474884,ENST00000542507,NM_001173128,NM_016258,uc001brc.2,uc001brd.2,uc010ofx.1_5end | |association_with_transcript=0bp_to_ENST00000474884,ENST00000542507,NM_001173128,NM_016258,uc001brc.2,uc001brd.2,uc010ofx.1_5end | ||
|cluster_id=chr1:29063119..29063144,+ | |||
|description=CAGE_peak_5_at_YTHDF2_5end | |description=CAGE_peak_5_at_YTHDF2_5end | ||
|id=chr1:29063119..29063144,+ | |id=chr1:29063119..29063144,+ | ||
|ontology_enrichment_celltype=CL:0000066!6.07e-18!254;CL:0000223!7.38e-10!59;CL:0000039!8.38e-08!7;CL:0000586!8.38e-08!7;CL:0002321!1.05e-07!248;CL:0002076!1.13e-07!43;CL:0000220!4.51e-07!246 | |ontology_enrichment_celltype=CL:0000066!6.07e-18!254;CL:0000223!7.38e-10!59;CL:0000039!8.38e-08!7;CL:0000586!8.38e-08!7;CL:0002321!1.05e-07!248;CL:0002076!1.13e-07!43;CL:0000220!4.51e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0000039;8.72e-23;7!CL:0000586;8.72e-23;7!CL:0002322;4.42e-16;5!CL:0002321;6.53e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.51e-23,7;CL:0000586,8.51e-23,7;CL:0002322,3.99e-16,5;CL:0000066,1.42e-09,253;CL:0000223,2.61e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.73e-09;31!UBERON:0009117;5.98e-08;10!UBERON:0005564;5.98e-08;10!UBERON:0004161;4.69e-07;11 | |||
|ontology_enrichment_disease=DOID:162!6.29e-19!235;DOID:14566!7.60e-19!239;DOID:0050687!5.16e-17!143;DOID:305!4.52e-15!106;DOID:0050686!2.55e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.22e-15;22!DOID:2994;3.22e-15;22!DOID:0050687;2.08e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.72e-18,106;DOID:0050687,5.95e-17,143;DOID:3095,3.10e-15,22;DOID:2994,3.10e-15,22;DOID:162,1.87e-14,235;DOID:14566,6.30e-14,239 | |||
|ontology_enrichment_uberon=UBERON:0005177!2.62e-07!107;UBERON:0005911!5.73e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.23e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.12e-07,8;UBERON:0005177,8.24e-07,101 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0,0.246242116153576,0.612002073732759,0,0.572471974262113,0.684372125364421,0.125542639594803,0.152826811495903,0.0821005894499457,0.236132343941038,0,0,0,0.919421224478927,0.6024118375565,0,2.16908161624845,0.853015394924529,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0,1.22968699970376,0.130979075497713,0,0,0,0,0,0.476981248610684,0.571994910780128,0.371457501329565,0.198762407366705,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0.488124115096339,0.367663080345869,0,0.357198913136319,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0.468642863667593,0,0,0,0.352303495931295,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.453728732640084,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0.0974370051611986,0,0.184099797284599,0,0,0,0,0.193260853163297,0,0.286804595389004,5.2448693635726,8.61443494089654,4.99633954338929,3.31715376049185,4.79409616663694,5.47466038613745,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0.343135620597051,0.768251997860379,0,0.201057944823262,0.185176890317059,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0.708875486211932,0,0.290633938513962,0.766765358330422,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0.571652865261156,0,0,0.22001485746285,0.258543431515556,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0.909382714338778,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0,0,0.164254312027618,0,0,4.10922128611516,0.200506470303285,0.184161977871793,0.114814448164607,0.182091168006717,0,0.451199612907412,0.616122696835318,0.784349769176855,1.46139224653261,1.05551628892876,0,0,0.431831832204279,0,0.812839312631559,0.501689773854853,0,0,0.447749509444357,0,0,0,0.656029291399411,0,1.03041011647722,0.183138929636687,0.165018999841176,0.574265537996172,0.650060246036521,0,0.193341436584244,0,0,0,0.214840489736547,0,0.255679882248303,0.178064071293475,0.165284915360978,0.384380134730212,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0,0,0,0.318203247925937,0,0.359744915166629,0,0.235624804691373,0.202182481573316,0,0,0.48763373908959,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0.563391205064483,0.286822704408103,0,0,0,0,0,0.379473173765715,0,0.192444225451024,0,1.08890984861323,0.564862804660675,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,2.7774258493143,0,2.45040215981032,1.11481905075431,0.432807638929335,1.56512055366511,0.318852545457645,0,0.191505370132367,0,0.324621940274555,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0.18714054040822,0,0.242721043499027,0,0,0.95497793895076,1.18785872333055,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0.503865495708552,0.20453736500431,0.123084805461069,0,0.359473404589307,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0.787139999965761,0,0.1137934482855,0.254253650292766,1.89110145414349,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2922928291045,17.9515288819544,29.2261430470202,2.23300811812344,0.915975934018623,0.533034776018635,1.02193298195737,0,0.332423363800313,0.451191321234361,0.392125068635479,0.335643173951685,0.569261198172555,0.317873157960757,0,0.489698424477443,2.82706142867882,0.432777279484182,0,0,0,0,0,0.104421949505455,0,0,0,2.18945747058799,0.19566461893209,2.91336455440911,0,0,0,0.063186579628488,2.55549813004637,1.65901106235595,0.664653872707185,0.992975867626496,0.941798755221676,0,2.27687636823834,0.138674673013139,2.95051555169723,0.979923974143776,0.174118413160805,0,0.343972064943233,0,0,0,0,0.529536760149002,0,0.274083849293502,0,0,1.56441106187842,0.0801588202515337,0,0.39961921916426,1.00863292007874,1.03082936549324,4.63306494227304,0.288109595976299,0.372757606696298,0,0.135904206073614,0.418411385249333,0.203996435272644,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,1.79711100449092,0,0,0,0.360299883542404,9.31967596219631,4.72699093843342,4.94495150286999,4.38123035052202,3.05125192695721,0.677386656526276,0,0,13.6640176195266,18.9804422504183,17.863934535255,0.2249738915515,0,0,0,0.315222829196793,0.157363764404994,2.95680942254338,0,0,0,0,2.79695391420225,0.542999601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| ||
|short_description=p5@YTHDF2 | |short_description=p5@YTHDF2 | ||
}} | }} |
Latest revision as of 10:57, 17 September 2015
Short description: | p5@YTHDF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_YTHDF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000474884, ENST00000542507, NM_001173128, NM_016258, uc001brc.2, uc001brd.2, uc010ofx.1_5end |
EntrezGene: | YTHDF2 |
HGNC: | 31675 |
UniProt: | Q9Y5A9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.51e-23 | 7 |
germ cell | 8.51e-23 | 7 |
embryonic stem cell | 3.99e-16 | 5 |
epithelial cell | 1.42e-09 | 253 |
endodermal cell | 2.61e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
testis | 8.12e-07 | 8 |
trunk region element | 8.24e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.72e-18 | 106 |
cell type cancer | 5.95e-17 | 143 |
germ cell and embryonal cancer | 3.10e-15 | 22 |
germ cell cancer | 3.10e-15 | 22 |
cancer | 1.87e-14 | 235 |
disease of cellular proliferation | 6.30e-14 | 239 |