FFCP PHASE1:Hg19::chr5:180229833..180229860,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4245 | |EntrezGene=4245 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7044 | |HGNC=7044 | ||
|TSSclassifier=strong | |||
|UniProt=P26572 | |UniProt=P26572 | ||
|association_with_transcript=24bp_to_ENST00000307826_5end | |association_with_transcript=24bp_to_ENST00000307826_5end | ||
|cluster_id=chr5:180229833..180229860,- | |||
|coexpression_cluster_id=C1147 | |||
|description=CAGE_peak_3_at_MGAT1_5end | |description=CAGE_peak_3_at_MGAT1_5end | ||
|id=chr5:180229833..180229860,- | |id=chr5:180229833..180229860,- | ||
|ontology_enrichment_celltype=CL:0000055!5.61e-24!180;CL:0000222!8.44e-20!119;CL:0000183!7.30e-19!59;CL:0000680!1.68e-17!57;CL:0000056!1.68e-17!57;CL:0000355!1.68e-17!57;CL:0000187!8.22e-17!54;CL:0000192!9.92e-15!42;CL:0000514!9.92e-15!42;CL:0000220!1.02e-14!246;CL:0002321!1.44e-14!248;CL:0000393!1.06e-13!60;CL:0000211!1.06e-13!60;CL:0002371!1.67e-13!591;CL:0000144!2.61e-13!625;CL:0000548!9.22e-13!679;CL:0000004!9.22e-13!679;CL:0000255!9.22e-13!679;CL:0000012!2.24e-12!682;CL:0000359!2.58e-11!32;CL:0000057!6.61e-11!75;CL:0000499!2.52e-07!27 | |ontology_enrichment_celltype=CL:0000055!5.61e-24!180;CL:0000222!8.44e-20!119;CL:0000183!7.30e-19!59;CL:0000680!1.68e-17!57;CL:0000056!1.68e-17!57;CL:0000355!1.68e-17!57;CL:0000187!8.22e-17!54;CL:0000192!9.92e-15!42;CL:0000514!9.92e-15!42;CL:0000220!1.02e-14!246;CL:0002321!1.44e-14!248;CL:0000393!1.06e-13!60;CL:0000211!1.06e-13!60;CL:0002371!1.67e-13!591;CL:0000144!2.61e-13!625;CL:0000548!9.22e-13!679;CL:0000004!9.22e-13!679;CL:0000255!9.22e-13!679;CL:0000012!2.24e-12!682;CL:0000359!2.58e-11!32;CL:0000057!6.61e-11!75;CL:0000499!2.52e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.06e-10;32!CL:0000192;3.79e-10;43!CL:0000187;2.62e-09;55!CL:0000499;7.86e-08;28!CL:0000349;1.15e-07;19!CL:0000393;6.25e-07;61!CL:0000211;6.25e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.57e-20,121;CL:0000680,4.81e-17,58;CL:0000056,4.81e-17,58;CL:0000355,4.81e-17,58;CL:0000187,2.40e-16,55;CL:0002321,1.22e-14,250;CL:0000192,3.25e-14,43;CL:0000514,3.25e-14,43;CL:0000393,2.71e-13,61;CL:0000211,2.71e-13,61;CL:0000057,1.75e-11,76;CL:0000359,2.35e-11,32;CL:0000499,7.04e-08,28;CL:0000349,1.08e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000514;3.79e-10;43!CL:0000355;3.05e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!6.24e-20!82;UBERON:0005256!7.36e-20!143;UBERON:0004290!1.87e-19!70;UBERON:0000914!2.42e-19!83;UBERON:0002329!2.42e-19!83;UBERON:0003077!2.42e-19!83;UBERON:0003059!2.42e-19!83;UBERON:0007282!2.42e-19!83;UBERON:0009618!2.42e-19!83;UBERON:0007285!2.42e-19!83;UBERON:0004872!7.27e-19!84;UBERON:0002100!8.50e-19!216;UBERON:0003104!8.83e-18!238;UBERON:0009142!8.83e-18!238;UBERON:0002049!1.38e-17!79;UBERON:0007798!1.38e-17!79;UBERON:0000926!2.49e-17!448;UBERON:0004120!2.49e-17!448;UBERON:0006603!2.49e-17!448;UBERON:0001134!2.04e-16!61;UBERON:0002036!2.04e-16!61;UBERON:0003082!2.04e-16!61;UBERON:0000490!6.48e-16!138;UBERON:0002385!1.21e-15!63;UBERON:0001015!1.21e-15!63;UBERON:0000383!1.21e-15!63;UBERON:0000055!2.21e-15!69;UBERON:0001981!2.64e-15!60;UBERON:0007500!2.64e-15!60;UBERON:0004537!2.64e-15!60;UBERON:0006965!2.64e-15!60;UBERON:0003914!6.04e-15!118;UBERON:0001009!5.79e-13!113;UBERON:0004535!2.61e-12!110;UBERON:0001637!9.92e-12!42;UBERON:0003509!9.92e-12!42;UBERON:0004572!9.92e-12!42;UBERON:0000468!5.50e-09!659;UBERON:0000481!6.21e-09!347;UBERON:0004573!9.93e-09!33;UBERON:0004571!9.93e-09!33;UBERON:0003102!1.48e-08!95;UBERON:0000480!1.00e-07!626;UBERON:0000467!1.22e-07!625;UBERON:0005631!1.73e-07!14;UBERON:0000158!1.73e-07!14;UBERON:0000475!4.70e-07!365;UBERON:0000119!8.54e-07!312 | |ontology_enrichment_uberon=UBERON:0000486!6.24e-20!82;UBERON:0005256!7.36e-20!143;UBERON:0004290!1.87e-19!70;UBERON:0000914!2.42e-19!83;UBERON:0002329!2.42e-19!83;UBERON:0003077!2.42e-19!83;UBERON:0003059!2.42e-19!83;UBERON:0007282!2.42e-19!83;UBERON:0009618!2.42e-19!83;UBERON:0007285!2.42e-19!83;UBERON:0004872!7.27e-19!84;UBERON:0002100!8.50e-19!216;UBERON:0003104!8.83e-18!238;UBERON:0009142!8.83e-18!238;UBERON:0002049!1.38e-17!79;UBERON:0007798!1.38e-17!79;UBERON:0000926!2.49e-17!448;UBERON:0004120!2.49e-17!448;UBERON:0006603!2.49e-17!448;UBERON:0001134!2.04e-16!61;UBERON:0002036!2.04e-16!61;UBERON:0003082!2.04e-16!61;UBERON:0000490!6.48e-16!138;UBERON:0002385!1.21e-15!63;UBERON:0001015!1.21e-15!63;UBERON:0000383!1.21e-15!63;UBERON:0000055!2.21e-15!69;UBERON:0001981!2.64e-15!60;UBERON:0007500!2.64e-15!60;UBERON:0004537!2.64e-15!60;UBERON:0006965!2.64e-15!60;UBERON:0003914!6.04e-15!118;UBERON:0001009!5.79e-13!113;UBERON:0004535!2.61e-12!110;UBERON:0001637!9.92e-12!42;UBERON:0003509!9.92e-12!42;UBERON:0004572!9.92e-12!42;UBERON:0000468!5.50e-09!659;UBERON:0000481!6.21e-09!347;UBERON:0004573!9.93e-09!33;UBERON:0004571!9.93e-09!33;UBERON:0003102!1.48e-08!95;UBERON:0000480!1.00e-07!626;UBERON:0000467!1.22e-07!625;UBERON:0005631!1.73e-07!14;UBERON:0000158!1.73e-07!14;UBERON:0000475!4.70e-07!365;UBERON:0000119!8.54e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.13e-09;42!UBERON:0003509;7.13e-09;42!UBERON:0004572;7.13e-09;42!UBERON:0007500;5.71e-08;56!UBERON:0001981;5.71e-08;56!UBERON:0004537;5.71e-08;56!UBERON:0004573;6.48e-08;33!UBERON:0004571;6.48e-08;33!UBERON:0003914;2.30e-07;74!UBERON:0002049;5.52e-07;75!UBERON:0007798;5.52e-07;75!UBERON:0000055;8.94e-07;65 | |||
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| ||
|short_description=p3@MGAT1 | |short_description=p3@MGAT1 | ||
}} | }} |
Latest revision as of 10:55, 17 September 2015
Short description: | p3@MGAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MGAT1_5end |
Coexpression cluster: | C1147_Mesenchymal_Renal_Alveolar_Fibroblast_Placental_Pericytes_Hepatic |
Association with transcript: | 24bp_to_ENST00000307826_5end |
EntrezGene: | MGAT1 |
HGNC: | 7044 |
UniProt: | P26572 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.57e-20 | 121 |
muscle precursor cell | 4.81e-17 | 58 |
myoblast | 4.81e-17 | 58 |
multi-potent skeletal muscle stem cell | 4.81e-17 | 58 |
muscle cell | 2.40e-16 | 55 |
embryonic cell | 1.22e-14 | 250 |
smooth muscle cell | 3.25e-14 | 43 |
smooth muscle myoblast | 3.25e-14 | 43 |
electrically responsive cell | 2.71e-13 | 61 |
electrically active cell | 2.71e-13 | 61 |
fibroblast | 1.75e-11 | 76 |
vascular associated smooth muscle cell | 2.35e-11 | 32 |
stromal cell | 7.04e-08 | 28 |
extraembryonic cell | 1.08e-07 | 19 |