FFCP PHASE1:Hg19::chr4:25678518..25678558,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:25678518..25678558,+
|short_description=p7@SLC34A2
|description=CAGE_peak_7_at_SLC34A2_5end
|association_with_transcript=85bp_to_AK075045_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10568 | |EntrezGene=10568 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11020 | |HGNC=11020 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=85bp_to_AK075045_5end | |||
|cluster_id=chr4:25678518..25678558,+ | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_7_at_SLC34A2_5end | |||
|id=chr4:25678518..25678558,+ | |||
|ontology_enrichment_celltype=CL:0000239!3.33e-10!3;CL:1000615!3.33e-10!3;CL:0002306!3.33e-10!3;CL:0000039!6.01e-09!7;CL:0000586!6.01e-09!7;CL:0000313!2.52e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0002188;7.25e-08;5!CL:0002149;8.25e-07;6!CL:0002255;8.25e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,7.01e-08,5;CL:0002149,8.02e-07,6;CL:0002255,8.02e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005754;8.34e-34;1!UBERON:0007297;1.17e-17;2!UBERON:0008947;4.56e-11;29!UBERON:0001041;1.01e-10;30 | |||
|ontology_enrichment_disease=DOID:2152!2.52e-08!1;DOID:1799!5.05e-08!1;DOID:10165!5.05e-08!1;DOID:1798!5.05e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3001;8.25e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0006853!3.33e-10!3;UBERON:0007685!3.33e-10!3;UBERON:0004134!3.33e-10!3;UBERON:0006947!3.49e-10!3;UBERON:0004054!3.49e-10!3;UBERON:0002171!1.65e-08!1;UBERON:0006518!1.65e-08!1;UBERON:0008949!1.65e-08!1;UBERON:0000101!1.65e-08!1;UBERON:0002167!1.65e-08!1;UBERON:0000998!2.35e-08!1;UBERON:0006868!2.35e-08!1;UBERON:0004911!2.52e-08!1;UBERON:0001000!3.58e-08!1;UBERON:0005352!3.58e-08!1;UBERON:0001154!4.40e-08!1;UBERON:0001153!4.40e-08!1;UBERON:0005904!7.61e-08!4;UBERON:0000464!2.99e-07!104;UBERON:0000489!3.58e-07!32;UBERON:0005177!6.14e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.18e-34;1!UBERON:0006518;2.18e-34;1!UBERON:0008949;2.18e-34;1!UBERON:0000101;2.18e-34;1!UBERON:0002167;2.18e-34;1!UBERON:0000998;8.34e-34;1!UBERON:0006868;8.34e-34;1!UBERON:0002048;2.44e-14;22!UBERON:0000117;2.44e-14;22!UBERON:0000171;2.44e-14;22!UBERON:0000170;2.44e-14;22!UBERON:0006947;3.06e-12;3!UBERON:0004054;3.06e-12;3!UBERON:0005904;1.63e-09;4!UBERON:0005178;1.37e-08;34!UBERON:0002224;1.37e-08;34!UBERON:0004175;2.95e-07;21!UBERON:0000065;5.47e-07;44!UBERON:0005181;6.95e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.84e-34,1;UBERON:0006518,1.84e-34,1;UBERON:0008949,1.84e-34,1;UBERON:0000101,1.84e-34,1;UBERON:0002167,1.84e-34,1;UBERON:0000998,9.85e-34,1;UBERON:0006868,9.85e-34,1;UBERON:0000080,1.52e-15,9;UBERON:0002120,1.52e-15,9;UBERON:0004875,1.52e-15,9;UBERON:0005721,1.52e-15,9;UBERON:0005754,1.52e-15,9;UBERON:0007297,1.52e-15,9;UBERON:0002048,2.49e-14,22;UBERON:0000117,2.49e-14,22;UBERON:0000171,2.49e-14,22;UBERON:0000170,2.49e-14,22;UBERON:0005597,2.49e-14,22;UBERON:0000118,2.49e-14,22;UBERON:0004876,6.49e-13,11;UBERON:0006947,3.24e-12,3;UBERON:0004054,3.24e-12,3;UBERON:0003887,6.34e-12,12;UBERON:0005178,1.53e-09,34;UBERON:0002224,1.53e-09,34;UBERON:0005904,1.70e-09,4;UBERON:0005181,2.73e-09,35;UBERON:0005153,7.95e-09,37;UBERON:0005177,1.29e-08,101;UBERON:0008947,1.30e-08,38;UBERON:0003258,1.30e-08,38;UBERON:0000058,6.82e-08,19;UBERON:0009569,8.32e-08,112;UBERON:0005157,4.31e-07,47 | |||
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|short_description=p7@SLC34A2 | |||
}} | }} |
Latest revision as of 10:41, 17 September 2015
Short description: | p7@SLC34A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SLC34A2_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | 85bp_to_AK075045_5end |
EntrezGene: | SLC34A2 |
HGNC: | 11020 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 7.01e-08 | 5 |
epithelial cell of uterus | 8.02e-07 | 6 |
stromal cell of endometrium | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.84e-34 | 1 |
right lung lobe | 1.84e-34 | 1 |
lower lobe of lung | 1.84e-34 | 1 |
lobe of lung | 1.84e-34 | 1 |
right lung | 1.84e-34 | 1 |
seminal vesicle | 9.85e-34 | 1 |
seminal fluid secreting gland | 9.85e-34 | 1 |
mesonephros | 1.52e-15 | 9 |
pronephros | 1.52e-15 | 9 |
nephrogenic cord | 1.52e-15 | 9 |
pronephric mesoderm | 1.52e-15 | 9 |
rostral part of nephrogenic cord | 1.52e-15 | 9 |
presumptive pronephric mesoderm | 1.52e-15 | 9 |
lung | 2.49e-14 | 22 |
respiratory tube | 2.49e-14 | 22 |
respiration organ | 2.49e-14 | 22 |
pair of lungs | 2.49e-14 | 22 |
lung primordium | 2.49e-14 | 22 |
lung bud | 2.49e-14 | 22 |
urogenital ridge | 6.49e-13 | 11 |
male genital duct | 3.24e-12 | 3 |
internal male genitalia | 3.24e-12 | 3 |
intraembryonic coelom | 6.34e-12 | 12 |
thoracic cavity element | 1.53e-09 | 34 |
thoracic cavity | 1.53e-09 | 34 |
duct of male reproductive system | 1.70e-09 | 4 |
thoracic segment organ | 2.73e-09 | 35 |
epithelial bud | 7.95e-09 | 37 |
trunk region element | 1.29e-08 | 101 |
respiratory primordium | 1.30e-08 | 38 |
endoderm of foregut | 1.30e-08 | 38 |
duct | 6.82e-08 | 19 |
subdivision of trunk | 8.32e-08 | 112 |
epithelial fold | 4.31e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 8.02e-07 | 6 |