FFCP PHASE1:Hg19::chr20:6103596..6103610,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55612 | |EntrezGene=55612 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15889 | |HGNC=15889 | ||
|TSSclassifier=strong | |||
|UniProt=G3V1L6 | |UniProt=G3V1L6 | ||
|association_with_transcript=66bp_to_ENST00000536936_5end | |association_with_transcript=66bp_to_ENST00000536936_5end | ||
|cluster_id=chr20:6103596..6103610,- | |||
|coexpression_cluster_id=C2625 | |coexpression_cluster_id=C2625 | ||
|description=CAGE_peak_8_at_FERMT1_5end | |description=CAGE_peak_8_at_FERMT1_5end | ||
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|ontology_enrichment_celltype=CL:0000066!1.70e-23!254;CL:0000223!2.78e-19!59;CL:0002076!1.17e-18!43;CL:0002251!4.13e-11!21;CL:0002368!2.06e-10!13;CL:0002202!1.99e-07!9;CL:0002632!1.99e-07!9 | |ontology_enrichment_celltype=CL:0000066!1.70e-23!254;CL:0000223!2.78e-19!59;CL:0002076!1.17e-18!43;CL:0002251!4.13e-11!21;CL:0002368!2.06e-10!13;CL:0002202!1.99e-07!9;CL:0002632!1.99e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002076;8.51e-22;42!CL:0002251;1.39e-21;20!CL:0000622;7.70e-17;5!CL:0002368;6.07e-15;13!CL:0000154;5.62e-14;6!CL:0002159;1.34e-13;14!CL:0002623;6.52e-11;3!CL:0000307;1.56e-10;3!CL:0002621;1.56e-10;3!CL:0002166;4.67e-10;3!CL:0000150;3.40e-09;9!CL:0002202;5.38e-09;9!CL:0002632;5.38e-09;9!CL:0002327;6.41e-08;4!CL:0000317;1.25e-07;2!CL:1000448;1.25e-07;2!CL:0002308;1.25e-07;2!CL:0002140;1.25e-07;2!CL:0000575;2.97e-07;2 | |ontology_enrichment_celltype_v019=CL:0002076;8.51e-22;42!CL:0002251;1.39e-21;20!CL:0000622;7.70e-17;5!CL:0002368;6.07e-15;13!CL:0000154;5.62e-14;6!CL:0002159;1.34e-13;14!CL:0002623;6.52e-11;3!CL:0000307;1.56e-10;3!CL:0002621;1.56e-10;3!CL:0002166;4.67e-10;3!CL:0000150;3.40e-09;9!CL:0002202;5.38e-09;9!CL:0002632;5.38e-09;9!CL:0002327;6.41e-08;4!CL:0000317;1.25e-07;2!CL:1000448;1.25e-07;2!CL:0002308;1.25e-07;2!CL:0002140;1.25e-07;2!CL:0000575;2.97e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.33e-29,42;CL:0000223,1.18e-26,58;CL:0002251,6.71e-22,20;CL:0000066,9.40e-21,253;CL:0000622,3.80e-17,5;CL:0002368,8.55e-15,13;CL:0000154,3.14e-14,6;CL:0002159,1.14e-13,14;CL:0002623,4.49e-11,3;CL:0002621,6.49e-11,3;CL:0000068,3.32e-10,3;CL:0000069,3.32e-10,3;CL:0000307,3.32e-10,3;CL:0000377,3.32e-10,3;CL:0002166,4.87e-10,3;CL:0000150,2.33e-09,9;CL:0002202,6.74e-09,9;CL:0002632,6.74e-09,9;CL:0002321,1.20e-08,250;CL:0002327,4.04e-08,4;CL:0000317,8.88e-08,2;CL:1000448,8.88e-08,2;CL:0002308,8.88e-08,2;CL:0002140,8.88e-08,2;CL:0000575,2.99e-07,2;CL:0000076,3.58e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;3.72e-16;58!CL:0000377;1.56e-10;3!UBERON:0008814;8.66e-08;2!UBERON:0010056;8.66e-08;2 | |ontology_enrichment_development_v019=CL:0000223;3.72e-16;58!CL:0000377;1.56e-10;3!UBERON:0008814;8.66e-08;2!UBERON:0010056;8.66e-08;2 | ||
|ontology_enrichment_disease=DOID:305!1.64e-19!106;DOID:0050687!1.96e-15!143;DOID:1749!1.45e-11!14;DOID:14566!3.31e-09!239;DOID:162!6.58e-09!235 | |ontology_enrichment_disease=DOID:305!1.64e-19!106;DOID:0050687!1.96e-15!143;DOID:1749!1.45e-11!14;DOID:14566!3.31e-09!239;DOID:162!6.58e-09!235 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.29e-14;14 | |ontology_enrichment_disease_v019=DOID:1749;3.29e-14;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,3.11e-14,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.27e-21!169;UBERON:0000925!2.27e-21!169;UBERON:0006595!2.27e-21!169;UBERON:0001007!5.56e-20!155;UBERON:0001555!5.56e-20!155;UBERON:0007026!5.56e-20!155;UBERON:0001004!4.76e-18!72;UBERON:0004921!1.10e-13!129;UBERON:0004185!1.10e-13!129;UBERON:0000077!1.47e-13!130;UBERON:0000065!1.55e-13!53;UBERON:0000072!5.37e-12!46;UBERON:0001041!1.69e-11!98;UBERON:0000481!2.19e-11!347;UBERON:0005911!6.83e-11!82;UBERON:0008947!3.75e-09!38;UBERON:0003258!3.75e-09!38;UBERON:0003104!2.40e-08!238;UBERON:0009142!2.40e-08!238;UBERON:0000161!3.43e-08!35;UBERON:0001557!4.52e-08!19;UBERON:0000166!5.68e-08!21;UBERON:0000165!9.11e-08!28;UBERON:0000930!9.11e-08!28;UBERON:0000064!9.21e-08!219;UBERON:0004807!1.89e-07!28;UBERON:0000063!2.66e-07!97;UBERON:0001048!4.47e-07!168;UBERON:0005153!5.11e-07!37;UBERON:0000475!6.90e-07!365 | |ontology_enrichment_uberon=UBERON:0004119!2.27e-21!169;UBERON:0000925!2.27e-21!169;UBERON:0006595!2.27e-21!169;UBERON:0001007!5.56e-20!155;UBERON:0001555!5.56e-20!155;UBERON:0007026!5.56e-20!155;UBERON:0001004!4.76e-18!72;UBERON:0004921!1.10e-13!129;UBERON:0004185!1.10e-13!129;UBERON:0000077!1.47e-13!130;UBERON:0000065!1.55e-13!53;UBERON:0000072!5.37e-12!46;UBERON:0001041!1.69e-11!98;UBERON:0000481!2.19e-11!347;UBERON:0005911!6.83e-11!82;UBERON:0008947!3.75e-09!38;UBERON:0003258!3.75e-09!38;UBERON:0003104!2.40e-08!238;UBERON:0009142!2.40e-08!238;UBERON:0000161!3.43e-08!35;UBERON:0001557!4.52e-08!19;UBERON:0000166!5.68e-08!21;UBERON:0000165!9.11e-08!28;UBERON:0000930!9.11e-08!28;UBERON:0000064!9.21e-08!219;UBERON:0004807!1.89e-07!28;UBERON:0000063!2.66e-07!97;UBERON:0001048!4.47e-07!168;UBERON:0005153!5.11e-07!37;UBERON:0000475!6.90e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0000161;7.50e-13;19!UBERON:0000166;7.50e-13;19!UBERON:0001949;1.56e-10;3!UBERON:0001004;1.58e-10;65!UBERON:0000165;4.92e-10;28!UBERON:0003729;8.10e-09;13!UBERON:0002365;1.21e-08;31!UBERON:0002330;1.21e-08;31!UBERON:0003343;1.84e-08;4!UBERON:0004785;1.84e-08;4!UBERON:0001041;5.37e-08;14!UBERON:0001911;6.41e-08;4!UBERON:0001708;1.20e-07;4!UBERON:0008895;1.20e-07;4!UBERON:0002419;1.25e-07;2!UBERON:0007771;1.25e-07;2!UBERON:0003297;1.25e-07;2!UBERON:0001821;1.25e-07;2!UBERON:0003487;1.25e-07;2!UBERON:0001820;1.25e-07;2!UBERON:0003929;1.28e-07;7!UBERON:0000344;2.93e-07;20 | |ontology_enrichment_uberon_v019=UBERON:0000161;7.50e-13;19!UBERON:0000166;7.50e-13;19!UBERON:0001949;1.56e-10;3!UBERON:0001004;1.58e-10;65!UBERON:0000165;4.92e-10;28!UBERON:0003729;8.10e-09;13!UBERON:0002365;1.21e-08;31!UBERON:0002330;1.21e-08;31!UBERON:0003343;1.84e-08;4!UBERON:0004785;1.84e-08;4!UBERON:0001041;5.37e-08;14!UBERON:0001911;6.41e-08;4!UBERON:0001708;1.20e-07;4!UBERON:0008895;1.20e-07;4!UBERON:0002419;1.25e-07;2!UBERON:0007771;1.25e-07;2!UBERON:0003297;1.25e-07;2!UBERON:0001821;1.25e-07;2!UBERON:0003487;1.25e-07;2!UBERON:0001820;1.25e-07;2!UBERON:0003929;1.28e-07;7!UBERON:0000344;2.93e-07;20 | ||
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| ||
|short_description=p8@FERMT1 | |short_description=p8@FERMT1 | ||
}} | }} |
Latest revision as of 10:38, 17 September 2015
Short description: | p8@FERMT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FERMT1_5end |
Coexpression cluster: | C2625_oral_keratoacanthoma_bronchial_Small_ductal_squamous_Keratinocyte |
Association with transcript: | 66bp_to_ENST00000536936_5end |
EntrezGene: | FERMT1 |
HGNC: | 15889 |
UniProt: | G3V1L6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.33e-29 | 42 |
endodermal cell | 1.18e-26 | 58 |
epithelial cell of alimentary canal | 6.71e-22 | 20 |
epithelial cell | 9.40e-21 | 253 |
acinar cell | 3.80e-17 | 5 |
respiratory epithelial cell | 8.55e-15 | 13 |
protein secreting cell | 3.14e-14 | 6 |
general ecto-epithelial cell | 1.14e-13 | 14 |
acinar cell of salivary gland | 4.49e-11 | 3 |
gingival epithelial cell | 6.49e-11 | 3 |
duct epithelial cell | 3.32e-10 | 3 |
branched duct epithelial cell | 3.32e-10 | 3 |
tracheal epithelial cell | 3.32e-10 | 3 |
tracheoblast | 3.32e-10 | 3 |
epithelial cell of Malassez | 4.87e-10 | 3 |
glandular epithelial cell | 2.33e-09 | 9 |
epithelial cell of tracheobronchial tree | 6.74e-09 | 9 |
epithelial cell of lower respiratory tract | 6.74e-09 | 9 |
embryonic cell | 1.20e-08 | 250 |
mammary gland epithelial cell | 4.04e-08 | 4 |
sebum secreting cell | 8.88e-08 | 2 |
epithelial cell of sweat gland | 8.88e-08 | 2 |
epithelial cell of skin gland | 8.88e-08 | 2 |
acinar cell of sebaceous gland | 8.88e-08 | 2 |
corneal epithelial cell | 2.99e-07 | 2 |
squamous epithelial cell | 3.58e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.11e-14 | 14 |