FFCP PHASE1:Hg19::chr1:154840536..154840565,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:154840536..154840565,- to FFCP PHASE1:Hg19::chr1:154840536..154840565,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3782 | |EntrezGene=3782 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6292 | |HGNC=6292 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VF9 | |UniProt=Q86VF9 | ||
|association_with_transcript=229bp_to_ENST00000358505_5end | |||
|cluster_id=chr1:154840536..154840565,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_KCNN3_5end | |||
|id=chr1:154840536..154840565,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.60e-15;82!UBERON:0006241;3.30e-08;3!UBERON:0003057;3.30e-08;3!UBERON:0006215;3.64e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.60e-65!115;UBERON:0001049!1.37e-57!57;UBERON:0005068!1.37e-57!57;UBERON:0006241!1.37e-57!57;UBERON:0007135!1.37e-57!57;UBERON:0001017!1.81e-54!82;UBERON:0005743!2.35e-52!86;UBERON:0000955!2.50e-48!69;UBERON:0006238!2.50e-48!69;UBERON:0002780!1.03e-47!41;UBERON:0001890!1.03e-47!41;UBERON:0006240!1.03e-47!41;UBERON:0002616!1.16e-47!59;UBERON:0000073!5.30e-47!94;UBERON:0001016!5.30e-47!94;UBERON:0003080!3.17e-46!42;UBERON:0002020!1.68e-40!34;UBERON:0003528!1.68e-40!34;UBERON:0001893!2.06e-40!34;UBERON:0002791!3.53e-39!33;UBERON:0003075!1.03e-38!86;UBERON:0007284!1.03e-38!86;UBERON:0001869!7.74e-38!32;UBERON:0002346!4.50e-36!90;UBERON:0003056!7.40e-30!61;UBERON:0000956!1.97e-28!25;UBERON:0000203!1.97e-28!25;UBERON:0000153!4.65e-28!129;UBERON:0007811!4.65e-28!129;UBERON:0002619!2.04e-26!22;UBERON:0000033!2.54e-26!123;UBERON:0001950!1.04e-23!20;UBERON:0004121!9.14e-22!169;UBERON:0000924!9.70e-21!173;UBERON:0006601!9.70e-21!173;UBERON:0000025!6.78e-19!194;UBERON:0004111!1.35e-18!241;UBERON:0000475!7.84e-16!365;UBERON:0000477!2.63e-15!286;UBERON:0000483!3.86e-15!309;UBERON:0000119!9.98e-15!312;UBERON:0000481!2.01e-14!347;UBERON:0002308!1.77e-13!9;UBERON:0000125!1.77e-13!9;UBERON:0002420!2.57e-13!9;UBERON:0007245!2.57e-13!9;UBERON:0010009!2.57e-13!9;UBERON:0010011!2.57e-13!9;UBERON:0000454!2.57e-13!9;UBERON:0000922!1.96e-12!612;UBERON:0003076!2.81e-12!15;UBERON:0003057!2.81e-12!15;UBERON:0002050!1.30e-11!605;UBERON:0005423!1.30e-11!605;UBERON:0000923!3.71e-11!604;UBERON:0005291!3.71e-11!604;UBERON:0006598!3.71e-11!604;UBERON:0002532!3.71e-11!604;UBERON:0009663!7.40e-11!7;UBERON:0004732!5.98e-10!13;UBERON:0000467!7.23e-10!625;UBERON:0000480!8.69e-10!626;UBERON:0000468!1.55e-09!659;UBERON:0002298!5.90e-09!8;UBERON:0004733!6.20e-09!12;UBERON:0002028!6.20e-09!12;UBERON:0007277!6.20e-09!12;UBERON:0000200!7.43e-09!6;UBERON:0001871!1.19e-08!7;UBERON:0001894!1.44e-08!7;UBERON:0006222!1.44e-08!7;UBERON:0000349!3.80e-08!5;UBERON:0000064!9.73e-08!219;UBERON:0001872!1.88e-07!5;UBERON:0002021!2.93e-07!5;UBERON:0000369!4.68e-07!4;UBERON:0002435!4.68e-07!4;UBERON:0000204!4.68e-07!4;UBERON:0010082!4.68e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.18e-57;34!UBERON:0003528;4.30e-57;34!UBERON:0002020;4.30e-57;34!UBERON:0002791;6.36e-56;32!UBERON:0001869;7.69e-56;32!UBERON:0002780;5.47e-50;41!UBERON:0001890;5.47e-50;41!UBERON:0000073;1.35e-49;53!UBERON:0002616;1.35e-49;53!UBERON:0002619;3.86e-48;22!UBERON:0000956;1.30e-45;25!UBERON:0000203;1.30e-45;25!UBERON:0001950;4.16e-43;20!UBERON:0000955;1.06e-32;68!UBERON:0001017;2.79e-31;75!UBERON:0001016;1.19e-25;83!UBERON:0000125;1.21e-23;9!UBERON:0002308;1.21e-23;9!UBERON:0002420;2.58e-23;9!UBERON:0007245;2.58e-23;9!UBERON:0010009;2.58e-23;9!UBERON:0010011;2.58e-23;9!UBERON:0000454;2.58e-23;9!UBERON:0009663;8.83e-19;7!UBERON:0004732;3.61e-18;13!UBERON:0007023;3.55e-17;114!UBERON:0004733;2.79e-16;12!UBERON:0002028;2.79e-16;12!UBERON:0002298;6.35e-16;6!UBERON:0000200;5.71e-15;6!UBERON:0000349;1.05e-13;5!UBERON:0001871;9.58e-13;6!UBERON:0001872;1.81e-12;5!UBERON:0002021;3.30e-12;5!UBERON:0000369;9.86e-12;4!UBERON:0002435;9.86e-12;4!UBERON:0000204;9.86e-12;4!UBERON:0011216;4.60e-11;132!UBERON:0002680;6.38e-10;9!UBERON:0001895;6.38e-10;9!UBERON:0005383;2.96e-09;3!UBERON:0005382;2.96e-09;3!UBERON:0000988;7.77e-09;3!UBERON:0001896;8.84e-09;3!UBERON:0005290;8.84e-09;3!UBERON:0001870;2.49e-08;3!UBERON:0002240;3.30e-08;3!UBERON:0005174;3.30e-08;3!UBERON:0001137;3.30e-08;3!UBERON:0010314;6.80e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.97e-93,56;UBERON:0005068,3.97e-93,56;UBERON:0006241,3.97e-93,56;UBERON:0007135,3.97e-93,56;UBERON:0000073,3.42e-86,53;UBERON:0002616,3.42e-86,53;UBERON:0001017,1.67e-77,81;UBERON:0000955,3.23e-73,68;UBERON:0006238,3.23e-73,68;UBERON:0001016,3.20e-71,89;UBERON:0002780,1.67e-70,41;UBERON:0001890,1.67e-70,41;UBERON:0003080,1.67e-70,41;UBERON:0006240,1.67e-70,41;UBERON:0003528,9.71e-68,34;UBERON:0002020,9.71e-68,34;UBERON:0001893,1.40e-67,34;UBERON:0007023,1.29e-63,114;UBERON:0001869,7.90e-63,32;UBERON:0002791,9.26e-63,32;UBERON:0003075,2.76e-62,82;UBERON:0007284,2.76e-62,82;UBERON:0002346,9.00e-59,86;UBERON:0002619,4.39e-48,22;UBERON:0003056,6.80e-47,61;UBERON:0010371,2.76e-46,104;UBERON:0000956,1.43e-45,25;UBERON:0000203,1.43e-45,25;UBERON:0001950,4.83e-43,20;UBERON:0010314,1.87e-35,132;UBERON:0004121,1.65e-30,171;UBERON:0000924,1.65e-30,171;UBERON:0006601,1.65e-30,171;UBERON:0011216,4.74e-30,223;UBERON:0000125,1.40e-23,9;UBERON:0002308,1.40e-23,9;UBERON:0002420,2.80e-23,9;UBERON:0007245,2.80e-23,9;UBERON:0010009,2.80e-23,9;UBERON:0010011,2.80e-23,9;UBERON:0000454,2.80e-23,9;UBERON:0003076,1.66e-22,15;UBERON:0003057,1.66e-22,15;UBERON:0000025,5.90e-19,192;UBERON:0009663,9.95e-19,7;UBERON:0004732,3.79e-18,13;UBERON:0004733,3.01e-16,12;UBERON:0002028,3.01e-16,12;UBERON:0007277,3.01e-16,12;UBERON:0002298,5.91e-16,6;UBERON:0000200,4.95e-15,6;UBERON:0004111,5.09e-15,240;UBERON:0000349,1.00e-13,5;UBERON:0001871,8.39e-13,6;UBERON:0001872,1.90e-12,5;UBERON:0000483,3.64e-12,306;UBERON:0002021,4.31e-12,5;UBERON:0000119,6.54e-12,309;UBERON:0000369,1.01e-11,4;UBERON:0002435,1.01e-11,4;UBERON:0000204,1.01e-11,4;UBERON:0010082,1.01e-11,4;UBERON:0002680,6.87e-10,9;UBERON:0001895,6.87e-10,9;UBERON:0010092,6.87e-10,9;UBERON:0005383,3.01e-09,3;UBERON:0005382,3.01e-09,3;UBERON:0002050,6.41e-09,564;UBERON:0000988,7.30e-09,3;UBERON:0001896,8.74e-09,3;UBERON:0005290,8.74e-09,3;UBERON:0010096,8.74e-09,3;UBERON:0000923,1.48e-08,560;UBERON:0010316,1.48e-08,560;UBERON:0005291,1.48e-08,560;UBERON:0006598,1.48e-08,560;UBERON:0010317,1.48e-08,560;UBERON:0002532,1.48e-08,560;UBERON:0001870,2.40e-08,3;UBERON:0002240,2.92e-08,3;UBERON:0005174,2.92e-08,3;UBERON:0001137,2.92e-08,3;UBERON:0005423,3.93e-08,581;UBERON:0000922,1.20e-07,592 | |||
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|short_description=p3@KCNN3 | |||
}} | }} |
Latest revision as of 10:13, 17 September 2015
Short description: | p3@KCNN3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KCNN3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 229bp_to_ENST00000358505_5end |
EntrezGene: | KCNN3 |
HGNC: | 6292 |
UniProt: | Q86VF9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data