FFCP PHASE1:Hg19::chr3:190580437..190580450,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=647309 | |EntrezGene=647309 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=40049 | |HGNC=40049 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9I9,A6NCL1 | |UniProt=G5E9I9,A6NCL1 | ||
|association_with_transcript=14bp_to_ENST00000456552,NM_001146686,uc011bsl.1_5end | |association_with_transcript=14bp_to_ENST00000456552,NM_001146686,uc011bsl.1_5end | ||
|cluster_id=chr3:190580437..190580450,- | |||
|coexpression_cluster_id=C158 | |||
|description=CAGE_peak_1_at_GMNC_5end | |description=CAGE_peak_1_at_GMNC_5end | ||
|id=chr3:190580437..190580450,- | |id=chr3:190580437..190580450,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002564;2.98e-17;3!CL:0002602;2.35e-12;2!CL:0000515;7.63e-09;3!CL:0000056;7.92e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,5.52e-17,3;CL:0002602,1.98e-12,2;CL:0000515,8.04e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0010122;9.57e-12;2!UBERON:0000358;5.36e-07;1!CL:0000515;7.92e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.90e-21!57;UBERON:0005068!7.90e-21!57;UBERON:0006241!7.90e-21!57;UBERON:0007135!7.90e-21!57;UBERON:0007023!2.40e-18!115;UBERON:0001017!6.94e-16!82;UBERON:0002780!7.95e-16!41;UBERON:0001890!7.95e-16!41;UBERON:0006240!7.95e-16!41;UBERON:0002616!1.12e-15!59;UBERON:0003080!2.81e-15!42;UBERON:0000955!7.98e-15!69;UBERON:0006238!7.98e-15!69;UBERON:0005743!1.23e-14!86;UBERON:0003075!2.62e-14!86;UBERON:0007284!2.62e-14!86;UBERON:0002020!9.57e-14!34;UBERON:0003528!9.57e-14!34;UBERON:0001893!1.55e-13!34;UBERON:0002346!3.44e-13!90;UBERON:0000073!4.12e-13!94;UBERON:0001016!4.12e-13!94;UBERON:0002791!7.45e-13!33;UBERON:0001869!1.57e-11!32;UBERON:0002308!6.30e-10!9;UBERON:0000125!6.30e-10!9;UBERON:0003056!2.81e-09!61;UBERON:0002619!2.39e-08!22;UBERON:0004121!2.54e-08!169;UBERON:0005174!3.05e-08!5;UBERON:0001137!3.05e-08!5;UBERON:0000924!7.49e-08!173;UBERON:0006601!7.49e-08!173;UBERON:0001950!8.39e-08!20;UBERON:0000033!8.95e-08!123;UBERON:0002420!1.09e-07!9;UBERON:0007245!1.09e-07!9;UBERON:0010009!1.09e-07!9;UBERON:0010011!1.09e-07!9;UBERON:0000454!1.09e-07!9;UBERON:0009663!1.94e-07!7;UBERON:0000475!4.15e-07!365;UBERON:0000956!5.30e-07!25;UBERON:0000203!5.30e-07!25;UBERON:0000153!5.61e-07!129;UBERON:0007811!5.61e-07!129;UBERON:0002298!7.63e-07!8;UBERON:0003076!8.19e-07!15;UBERON:0003057!8.19e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;7.97e-28;5!UBERON:0002216;7.97e-28;5!UBERON:0011134;7.97e-28;5!UBERON:0002209;7.97e-28;5!UBERON:0002213;7.97e-28;5!UBERON:0007844;7.97e-28;5!UBERON:0011138;7.97e-28;5!UBERON:0001130;7.97e-28;5!UBERON:0001066;7.97e-28;5!UBERON:0001468;7.97e-28;5!UBERON:0004905;2.44e-17;8!UBERON:0000982;2.44e-17;8!UBERON:0004770;2.44e-17;8!UBERON:0002242;2.98e-17;3!UBERON:0006444;2.35e-12;2!UBERON:0001995;2.35e-12;2!UBERON:0004715;2.35e-12;2!UBERON:0001873;9.57e-12;2!UBERON:0004765;1.23e-09;26!UBERON:0000075;1.47e-08;16!UBERON:0002418;1.60e-08;3!UBERON:0004755;1.60e-08;3!UBERON:0005383;4.05e-08;3!UBERON:0005382;4.05e-08;3!UBERON:0001301;3.78e-07;1!UBERON:0002336;5.36e-07;1!UBERON:0007195;5.36e-07;1!UBERON:0011215;5.36e-07;1!UBERON:0001018;5.36e-07;1!UBERON:0002473;5.36e-07;1!UBERON:0005340;5.36e-07;1!UBERON:0003544;5.36e-07;1!UBERON:0005970;5.36e-07;1!UBERON:0002316;5.36e-07;1!UBERON:0001020;5.36e-07;1!UBERON:0002437;5.36e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.25e-27,5;UBERON:0002216,1.25e-27,5;UBERON:0011134,1.25e-27,5;UBERON:0002209,1.25e-27,5;UBERON:0002213,1.25e-27,5;UBERON:0005856,1.25e-27,5;UBERON:0005866,1.25e-27,5;UBERON:0005863,1.25e-27,5;UBERON:0007844,1.25e-27,5;UBERON:0011138,1.25e-27,5;UBERON:0001130,1.25e-27,5;UBERON:0001066,1.25e-27,5;UBERON:0001468,1.25e-27,5;UBERON:0004905,3.21e-17,8;UBERON:0000982,3.21e-17,8;UBERON:0004770,3.21e-17,8;UBERON:0002242,5.52e-17,3;UBERON:0003068,5.52e-17,3;UBERON:0002328,5.52e-17,3;UBERON:0004880,5.52e-17,3;UBERON:0006444,1.98e-12,2;UBERON:0001995,1.98e-12,2;UBERON:0004715,1.98e-12,2;UBERON:0001873,6.49e-12,2;UBERON:0010122,6.49e-12,2;UBERON:0003104,1.28e-08,160;UBERON:0009142,1.28e-08,160;UBERON:0002418,1.43e-08,3;UBERON:0004755,1.43e-08,3;UBERON:0000075,1.67e-08,16;UBERON:0005383,3.13e-08,3;UBERON:0005382,3.13e-08,3;UBERON:0001301,3.78e-07,1;UBERON:0002336,6.38e-07,1;UBERON:0011215,6.38e-07,1;UBERON:0001018,6.38e-07,1;UBERON:0002473,6.38e-07,1;UBERON:0005340,6.38e-07,1;UBERON:0003544,6.38e-07,1;UBERON:0005970,6.38e-07,1;UBERON:0002316,6.38e-07,1;UBERON:0001020,6.38e-07,1;UBERON:0002437,6.38e-07,1;UBERON:0007195,6.76e-07,1 | |||
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| ||
|short_description=p1@GMNC | |short_description=p1@GMNC | ||
}} | }} |
Latest revision as of 10:12, 17 September 2015
Short description: | p1@GMNC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GMNC_5end |
Coexpression cluster: | C158_adrenal_gastric_temporal_parietal_duodenum_caudate_putamen |
Association with transcript: | 14bp_to_ENST00000456552, NM_001146686, uc011bsl.1_5end |
EntrezGene: | GMNC |
HGNC: | 40049 |
UniProt: | G5E9I9A6NCL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 5.52e-17 | 3 |
annulus pulposus cell | 1.98e-12 | 2 |
skeletal muscle myoblast | 8.04e-07 | 4 |