FFCP PHASE1:Hg19::chr19:35626114..35626161,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=163175 | |EntrezGene=163175 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18712 | |HGNC=18712 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N135,A8MVC2 | |UniProt=Q8N135,A8MVC2 | ||
|association_with_transcript=-10bp_to_ENST00000310123,ENST00000392225_5end | |association_with_transcript=-10bp_to_ENST00000310123,ENST00000392225_5end | ||
|cluster_id=chr19:35626114..35626161,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_LGI4_5end | |description=CAGE_peak_3_at_LGI4_5end | ||
|id=chr19:35626114..35626161,- | |id=chr19:35626114..35626161,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.63e-17;82!UBERON:0006241;1.48e-08;3!UBERON:0003057;1.48e-08;3!UBERON:0006215;1.62e-07;3!UBERON:0002532;5.07e-07;206!UBERON:0010316;5.07e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;3.40e-42;34!UBERON:0001869;9.25e-42;32!UBERON:0003528;4.28e-40;34!UBERON:0002020;4.28e-40;34!UBERON:0002791;7.26e-39;32!UBERON:0002619;8.47e-39;22!UBERON:0002780;5.70e-36;41!UBERON:0001890;5.70e-36;41!UBERON:0000073;1.49e-35;53!UBERON:0002616;1.49e-35;53!UBERON:0001950;1.17e-34;20!UBERON:0000956;1.35e-33;25!UBERON:0000203;1.35e-33;25!UBERON:0001017;2.48e-24;75!UBERON:0000955;6.68e-24;68!UBERON:0007023;2.68e-22;114!UBERON:0001016;3.68e-19;83!UBERON:0004732;2.54e-16;13!UBERON:0002420;1.18e-14;9!UBERON:0007245;1.18e-14;9!UBERON:0010009;1.18e-14;9!UBERON:0010011;1.18e-14;9!UBERON:0000454;1.18e-14;9!UBERON:0000125;1.45e-14;9!UBERON:0002308;1.45e-14;9!UBERON:0004733;3.58e-14;12!UBERON:0002028;3.58e-14;12!UBERON:0002298;1.02e-13;6!UBERON:0000200;4.35e-13;6!UBERON:0000349;1.16e-11;5!UBERON:0001872;3.20e-11;5!UBERON:0009663;5.98e-11;7!UBERON:0001871;9.71e-11;6!UBERON:0011216;2.90e-09;132!UBERON:0000369;3.17e-09;4!UBERON:0002435;3.17e-09;4!UBERON:0000204;3.17e-09;4!UBERON:0002240;1.48e-08;3!UBERON:0005174;1.48e-08;3!UBERON:0001137;1.48e-08;3!UBERON:0002680;1.65e-08;9!UBERON:0001895;1.65e-08;9!UBERON:0002021;4.02e-08;5!UBERON:0001896;4.26e-08;3!UBERON:0005290;4.26e-08;3!UBERON:0001870;1.01e-07;3!UBERON:0003978;1.18e-07;3!UBERON:0000946;1.18e-07;3!UBERON:0010314;1.21e-07;132!UBERON:0000988;2.68e-07;3!UBERON:0004151;3.81e-07;3!UBERON:0005383;3.81e-07;3!UBERON:0005382;3.81e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.07e-88,114;UBERON:0001049,1.42e-70,56;UBERON:0005068,1.42e-70,56;UBERON:0006241,1.42e-70,56;UBERON:0007135,1.42e-70,56;UBERON:0000073,7.48e-64,53;UBERON:0002616,7.48e-64,53;UBERON:0003075,9.04e-57,82;UBERON:0007284,9.04e-57,82;UBERON:0001017,4.06e-54,81;UBERON:0002346,1.73e-53,86;UBERON:0000955,7.56e-52,68;UBERON:0006238,7.56e-52,68;UBERON:0002780,1.87e-50,41;UBERON:0001890,1.87e-50,41;UBERON:0003080,1.87e-50,41;UBERON:0006240,1.87e-50,41;UBERON:0001016,5.90e-50,89;UBERON:0001893,3.55e-47,34;UBERON:0003528,1.07e-46,34;UBERON:0002020,1.07e-46,34;UBERON:0001869,1.30e-46,32;UBERON:0002791,5.17e-43,32;UBERON:0010371,7.89e-42,104;UBERON:0002619,1.27e-38,22;UBERON:0010314,1.02e-37,132;UBERON:0003056,1.37e-35,61;UBERON:0001950,1.50e-34,20;UBERON:0000956,1.93e-33,25;UBERON:0000203,1.93e-33,25;UBERON:0011216,1.62e-26,223;UBERON:0004121,1.97e-24,171;UBERON:0000924,1.97e-24,171;UBERON:0006601,1.97e-24,171;UBERON:0000025,2.45e-23,192;UBERON:0003076,2.26e-20,15;UBERON:0003057,2.26e-20,15;UBERON:0004111,3.15e-19,240;UBERON:0004732,3.23e-16,13;UBERON:0002420,1.10e-14,9;UBERON:0007245,1.10e-14,9;UBERON:0010009,1.10e-14,9;UBERON:0010011,1.10e-14,9;UBERON:0000454,1.10e-14,9;UBERON:0000125,1.53e-14,9;UBERON:0002308,1.53e-14,9;UBERON:0004733,4.51e-14,12;UBERON:0002028,4.51e-14,12;UBERON:0007277,4.51e-14,12;UBERON:0002298,1.24e-13,6;UBERON:0000483,2.88e-13,306;UBERON:0000200,3.95e-13,6;UBERON:0000119,5.48e-13,309;UBERON:0000349,1.35e-11,5;UBERON:0001872,4.77e-11,5;UBERON:0009663,6.10e-11,7;UBERON:0001871,8.65e-11,6;UBERON:0000922,3.64e-10,592;UBERON:0005423,1.78e-09,581;UBERON:0000923,2.71e-09,560;UBERON:0010316,2.71e-09,560;UBERON:0005291,2.71e-09,560;UBERON:0006598,2.71e-09,560;UBERON:0010317,2.71e-09,560;UBERON:0002532,2.71e-09,560;UBERON:0000369,3.28e-09,4;UBERON:0002435,3.28e-09,4;UBERON:0000204,3.28e-09,4;UBERON:0010082,3.28e-09,4;UBERON:0002050,4.33e-09,564;UBERON:0002240,1.50e-08,3;UBERON:0005174,1.50e-08,3;UBERON:0001137,1.50e-08,3;UBERON:0002680,1.89e-08,9;UBERON:0001895,1.89e-08,9;UBERON:0010092,1.89e-08,9;UBERON:0002021,3.71e-08,5;UBERON:0001896,4.74e-08,3;UBERON:0005290,4.74e-08,3;UBERON:0010096,4.74e-08,3;UBERON:0003978,9.96e-08,3;UBERON:0009751,9.96e-08,3;UBERON:0000946,9.96e-08,3;UBERON:0002523,9.96e-08,3;UBERON:0005983,9.96e-08,3;UBERON:0002165,9.96e-08,3;UBERON:0002062,9.96e-08,3;UBERON:0007280,9.96e-08,3;UBERON:0001870,1.14e-07,3;UBERON:0000988,2.93e-07,3;UBERON:0004151,3.58e-07,3;UBERON:0005383,3.65e-07,3;UBERON:0005382,3.65e-07,3 | |||
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| ||
|short_description=p3@LGI4 | |short_description=p3@LGI4 | ||
}} | }} |
Latest revision as of 10:01, 17 September 2015
Short description: | p3@LGI4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LGI4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -10bp_to_ENST00000310123, ENST00000392225_5end |
EntrezGene: | LGI4 |
HGNC: | 18712 |
UniProt: | Q8N135A8MVC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data