FFCP PHASE1:Hg19::chr19:35540197..35540225,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3249 | |EntrezGene=3249 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5155 | |HGNC=5155 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002nxt.1_5end | |association_with_transcript=0bp_to_uc002nxt.1_5end | ||
|cluster_id=chr19:35540197..35540225,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_3_at_HPN_5end | |description=CAGE_peak_3_at_HPN_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;2.19e-12;1!UBERON:0006601;2.44e-10;82 | |ontology_enrichment_development_v019=UBERON:0006222;2.19e-12;1!UBERON:0006601;2.44e-10;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.32e-82!57;UBERON:0005068!1.32e-82!57;UBERON:0006241!1.32e-82!57;UBERON:0007135!1.32e-82!57;UBERON:0002616!3.88e-71!59;UBERON:0007023!2.54e-69!115;UBERON:0002780!9.10e-68!41;UBERON:0001890!9.10e-68!41;UBERON:0006240!9.10e-68!41;UBERON:0003080!5.32e-66!42;UBERON:0000955!9.92e-66!69;UBERON:0006238!9.92e-66!69;UBERON:0001893!3.83e-61!34;UBERON:0002020!4.69e-61!34;UBERON:0003528!4.69e-61!34;UBERON:0001017!3.08e-60!82;UBERON:0002791!5.45e-58!33;UBERON:0005743!5.01e-57!86;UBERON:0001869!1.01e-54!32;UBERON:0003075!1.35e-54!86;UBERON:0007284!1.35e-54!86;UBERON:0002346!9.55e-52!90;UBERON:0000073!9.01e-51!94;UBERON:0001016!9.01e-51!94;UBERON:0002619!2.01e-44!22;UBERON:0003056!2.86e-43!61;UBERON:0000033!4.77e-39!123;UBERON:0000153!7.21e-39!129;UBERON:0007811!7.21e-39!129;UBERON:0000956!9.66e-39!25;UBERON:0000203!9.66e-39!25;UBERON:0001950!1.35e-38!20;UBERON:0004121!1.23e-28!169;UBERON:0000924!9.67e-28!173;UBERON:0006601!9.67e-28!173;UBERON:0002308!2.25e-24!9;UBERON:0000125!2.25e-24!9;UBERON:0002420!6.30e-24!9;UBERON:0007245!6.30e-24!9;UBERON:0010009!6.30e-24!9;UBERON:0010011!6.30e-24!9;UBERON:0000454!6.30e-24!9;UBERON:0000025!1.55e-22!194;UBERON:0004111!2.44e-19!241;UBERON:0009663!7.43e-18!7;UBERON:0000349!3.85e-17!5;UBERON:0003076!4.05e-17!15;UBERON:0003057!4.05e-17!15;UBERON:0000477!1.79e-16!286;UBERON:0002298!6.59e-16!8;UBERON:0001871!8.12e-15!7;UBERON:0000200!2.00e-14!6;UBERON:0000483!1.64e-13!309;UBERON:0004733!2.08e-13!12;UBERON:0002028!2.08e-13!12;UBERON:0007277!2.08e-13!12;UBERON:0000119!2.82e-13!312;UBERON:0004732!2.71e-12!13;UBERON:0000475!4.57e-12!365;UBERON:0006331!8.48e-12!3;UBERON:0002021!9.90e-12!5;UBERON:0000988!1.16e-11!3;UBERON:0001872!2.11e-11!5;UBERON:0002771!9.12e-11!3;UBERON:0000064!1.75e-10!219;UBERON:0002680!1.73e-09!9;UBERON:0001895!1.73e-09!9;UBERON:0010092!1.73e-09!9;UBERON:0001897!2.02e-08!2;UBERON:0001875!2.17e-08!2;UBERON:0006514!2.17e-08!2;UBERON:0002148!2.25e-08!2;UBERON:0009662!2.25e-08!2;UBERON:0000481!2.35e-08!347;UBERON:0001894!2.53e-08!7;UBERON:0006222!2.53e-08!7;UBERON:0000369!2.91e-08!4;UBERON:0002435!2.91e-08!4;UBERON:0000204!2.91e-08!4;UBERON:0010082!2.91e-08!4;UBERON:0000062!4.67e-08!511;UBERON:0001876!7.36e-08!2;UBERON:0001954!9.66e-08!2;UBERON:0003022!9.66e-08!2;UBERON:0002421!9.66e-08!2;UBERON:0002600!9.66e-08!2 | |ontology_enrichment_uberon=UBERON:0001049!1.32e-82!57;UBERON:0005068!1.32e-82!57;UBERON:0006241!1.32e-82!57;UBERON:0007135!1.32e-82!57;UBERON:0002616!3.88e-71!59;UBERON:0007023!2.54e-69!115;UBERON:0002780!9.10e-68!41;UBERON:0001890!9.10e-68!41;UBERON:0006240!9.10e-68!41;UBERON:0003080!5.32e-66!42;UBERON:0000955!9.92e-66!69;UBERON:0006238!9.92e-66!69;UBERON:0001893!3.83e-61!34;UBERON:0002020!4.69e-61!34;UBERON:0003528!4.69e-61!34;UBERON:0001017!3.08e-60!82;UBERON:0002791!5.45e-58!33;UBERON:0005743!5.01e-57!86;UBERON:0001869!1.01e-54!32;UBERON:0003075!1.35e-54!86;UBERON:0007284!1.35e-54!86;UBERON:0002346!9.55e-52!90;UBERON:0000073!9.01e-51!94;UBERON:0001016!9.01e-51!94;UBERON:0002619!2.01e-44!22;UBERON:0003056!2.86e-43!61;UBERON:0000033!4.77e-39!123;UBERON:0000153!7.21e-39!129;UBERON:0007811!7.21e-39!129;UBERON:0000956!9.66e-39!25;UBERON:0000203!9.66e-39!25;UBERON:0001950!1.35e-38!20;UBERON:0004121!1.23e-28!169;UBERON:0000924!9.67e-28!173;UBERON:0006601!9.67e-28!173;UBERON:0002308!2.25e-24!9;UBERON:0000125!2.25e-24!9;UBERON:0002420!6.30e-24!9;UBERON:0007245!6.30e-24!9;UBERON:0010009!6.30e-24!9;UBERON:0010011!6.30e-24!9;UBERON:0000454!6.30e-24!9;UBERON:0000025!1.55e-22!194;UBERON:0004111!2.44e-19!241;UBERON:0009663!7.43e-18!7;UBERON:0000349!3.85e-17!5;UBERON:0003076!4.05e-17!15;UBERON:0003057!4.05e-17!15;UBERON:0000477!1.79e-16!286;UBERON:0002298!6.59e-16!8;UBERON:0001871!8.12e-15!7;UBERON:0000200!2.00e-14!6;UBERON:0000483!1.64e-13!309;UBERON:0004733!2.08e-13!12;UBERON:0002028!2.08e-13!12;UBERON:0007277!2.08e-13!12;UBERON:0000119!2.82e-13!312;UBERON:0004732!2.71e-12!13;UBERON:0000475!4.57e-12!365;UBERON:0006331!8.48e-12!3;UBERON:0002021!9.90e-12!5;UBERON:0000988!1.16e-11!3;UBERON:0001872!2.11e-11!5;UBERON:0002771!9.12e-11!3;UBERON:0000064!1.75e-10!219;UBERON:0002680!1.73e-09!9;UBERON:0001895!1.73e-09!9;UBERON:0010092!1.73e-09!9;UBERON:0001897!2.02e-08!2;UBERON:0001875!2.17e-08!2;UBERON:0006514!2.17e-08!2;UBERON:0002148!2.25e-08!2;UBERON:0009662!2.25e-08!2;UBERON:0000481!2.35e-08!347;UBERON:0001894!2.53e-08!7;UBERON:0006222!2.53e-08!7;UBERON:0000369!2.91e-08!4;UBERON:0002435!2.91e-08!4;UBERON:0000204!2.91e-08!4;UBERON:0010082!2.91e-08!4;UBERON:0000062!4.67e-08!511;UBERON:0001876!7.36e-08!2;UBERON:0001954!9.66e-08!2;UBERON:0003022!9.66e-08!2;UBERON:0002421!9.66e-08!2;UBERON:0002600!9.66e-08!2 | ||
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|short_description=p3@HPN | |short_description=p3@HPN | ||
}} | }} |
Latest revision as of 09:37, 17 September 2015
Short description: | p3@HPN |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HPN_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_uc002nxt.1_5end |
EntrezGene: | HPN |
HGNC: | 5155 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data