FFCP PHASE1:Hg19::chr5:179233835..179233873,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:179233835..179233873,- to FFCP PHASE1:Hg19::chr5:179233835..179233873,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11282 | |EntrezGene=11282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7048 | |HGNC=7048 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQ53 | |UniProt=Q9UQ53 | ||
|association_with_transcript=60bp_to_ENST00000292591_5end | |||
|cluster_id=chr5:179233835..179233873,- | |||
|coexpression_cluster_id=C4488 | |||
|description=CAGE_peak_1_at_MGAT4B_5end | |||
|id=chr5:179233835..179233873,- | |||
|ontology_enrichment_celltype=CL:0002321!2.06e-35!248;CL:0000220!2.89e-35!246;CL:0000548!6.99e-32!679;CL:0000004!6.99e-32!679;CL:0000255!6.99e-32!679;CL:0000012!1.89e-31!682;CL:0000222!3.44e-30!119;CL:0000066!2.00e-29!254;CL:0000144!1.93e-26!625;CL:0002371!2.49e-21!591;CL:0000003!1.24e-20!722;CL:0000055!3.60e-19!180;CL:0000213!1.19e-18!57;CL:0000215!1.19e-18!57;CL:0000063!3.12e-14!578;CL:0002078!1.13e-13!44;CL:0000115!1.16e-12!35;CL:0000183!1.11e-11!59;CL:0000192!4.96e-11!42;CL:0000514!4.96e-11!42;CL:1000449!2.59e-10!16;CL:0000680!2.74e-10!57;CL:0000056!2.74e-10!57;CL:0000355!2.74e-10!57;CL:0000359!4.41e-10!32;CL:0000076!6.89e-10!62;CL:0002139!1.21e-09!24;CL:1000497!1.34e-09!18;CL:0002518!1.34e-09!18;CL:0000187!1.83e-09!54;CL:1000507!1.96e-08!12;CL:1000494!1.96e-08!12;CL:0000393!2.01e-08!60;CL:0000211!2.01e-08!60;CL:0002681!2.49e-08!13;CL:0002584!2.49e-08!13;CL:0000057!3.48e-08!75;CL:0000077!8.05e-08!19;CL:0000071!2.15e-07!18;CL:0002546!2.15e-07!18;CL:0000223!7.63e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000115;4.68e-11;36!CL:0000213;8.04e-11;58!CL:0000215;8.04e-11;58!CL:0002078;5.25e-10;45!CL:1000449;7.49e-10;15!CL:0000359;9.13e-10;32!CL:0002139;1.16e-09;24!CL:1000497;4.00e-09;17!CL:0002518;4.00e-09;17!CL:0000192;1.02e-08;43!CL:0002681;7.24e-08;12!CL:0002584;7.24e-08;12!CL:0000077;8.25e-08;19!CL:1000507;1.63e-07;10!CL:1000494;1.63e-07;10!CL:0000071;2.07e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.09e-36,250;CL:0000222,3.43e-31,121;CL:0000066,5.66e-29,253;CL:0000213,3.92e-19,58;CL:0000215,3.92e-19,58;CL:0002078,3.88e-14,45;CL:0000115,3.92e-13,36;CL:0000192,1.81e-11,43;CL:0000514,1.81e-11,43;CL:0000680,1.09e-10,58;CL:0000056,1.09e-10,58;CL:0000355,1.09e-10,58;CL:0000359,4.41e-10,32;CL:0000076,4.78e-10,63;CL:0000187,7.40e-10,55;CL:1000449,7.53e-10,15;CL:0002139,1.21e-09,24;CL:1000497,3.95e-09,17;CL:0002518,3.95e-09,17;CL:0000393,8.67e-09,61;CL:0000211,8.67e-09,61;CL:0000057,3.92e-08,76;CL:0002681,7.27e-08,12;CL:0002584,7.27e-08,12;CL:0000077,8.05e-08,19;CL:1000507,1.66e-07,10;CL:1000494,1.66e-07,10;CL:0000071,2.15e-07,18;CL:0002546,2.15e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000222;3.51e-09;121!CL:0000514;1.02e-08;43!CL:0002546;2.07e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!8.49e-26!118;UBERON:0002049!1.34e-18!79;UBERON:0007798!1.34e-18!79;UBERON:0000055!1.04e-17!69;UBERON:0002100!9.77e-17!216;UBERON:0000490!1.10e-16!138;UBERON:0005256!1.57e-15!143;UBERON:0001981!6.88e-15!60;UBERON:0007500!6.88e-15!60;UBERON:0004537!6.88e-15!60;UBERON:0006965!6.88e-15!60;UBERON:0001637!8.56e-15!42;UBERON:0003509!8.56e-15!42;UBERON:0004572!8.56e-15!42;UBERON:0004872!2.11e-14!84;UBERON:0004535!1.10e-13!110;UBERON:0001009!2.85e-13!113;UBERON:0009569!1.13e-11!113;UBERON:0004573!1.27e-11!33;UBERON:0004571!1.27e-11!33;UBERON:0003104!1.94e-10!238;UBERON:0009142!1.94e-10!238;UBERON:0000926!2.28e-10!448;UBERON:0004120!2.28e-10!448;UBERON:0006603!2.28e-10!448;UBERON:0004211!2.59e-10!16;UBERON:0001285!2.59e-10!16;UBERON:0007684!2.59e-10!16;UBERON:0003220!2.59e-10!16;UBERON:0004208!2.59e-10!16;UBERON:0000486!1.08e-09!82;UBERON:0000353!1.49e-09!17;UBERON:0006555!3.39e-09!17;UBERON:0005103!3.39e-09!17;UBERON:0000083!3.39e-09!17;UBERON:0009201!3.39e-09!17;UBERON:0004819!3.39e-09!17;UBERON:0006553!3.39e-09!17;UBERON:0003074!3.39e-09!17;UBERON:0003060!3.39e-09!17;UBERON:0000466!6.65e-09!126;UBERON:0002417!1.33e-08!61;UBERON:0000916!1.33e-08!61;UBERON:0009773!1.96e-08!12;UBERON:0001231!1.96e-08!12;UBERON:0004810!1.96e-08!12;UBERON:0001225!2.49e-08!13;UBERON:0008987!2.49e-08!13;UBERON:0000080!3.70e-08!18;UBERON:0002120!3.70e-08!18;UBERON:0004875!3.70e-08!18;UBERON:0005721!3.70e-08!18;UBERON:0005754!3.70e-08!18;UBERON:0007297!3.70e-08!18;UBERON:0004290!3.87e-08!70;UBERON:0001134!6.13e-08!61;UBERON:0002036!6.13e-08!61;UBERON:0003082!6.13e-08!61;UBERON:0002385!8.05e-08!63;UBERON:0001015!8.05e-08!63;UBERON:0000383!8.05e-08!63;UBERON:0006554!1.02e-07!44;UBERON:0001986!2.15e-07!18;UBERON:0004638!2.15e-07!18;UBERON:0004852!2.15e-07!18;UBERON:0001008!2.27e-07!45;UBERON:0004876!2.28e-07!20;UBERON:0000947!2.95e-07!21;UBERON:0010191!2.95e-07!21;UBERON:0000914!3.28e-07!83;UBERON:0002329!3.28e-07!83;UBERON:0003077!3.28e-07!83;UBERON:0003059!3.28e-07!83;UBERON:0007282!3.28e-07!83;UBERON:0009618!3.28e-07!83;UBERON:0007285!3.28e-07!83;UBERON:0000487!4.43e-07!22;UBERON:0005172!4.69e-07!55;UBERON:0005173!4.69e-07!55;UBERON:0000119!5.31e-07!312;UBERON:0000483!5.71e-07!309;UBERON:0005177!6.65e-07!107;UBERON:0000058!9.91e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.19e-11;42!UBERON:0003509;7.19e-11;42!UBERON:0004572;7.19e-11;42!UBERON:0003914;9.51e-11;74!UBERON:0004573;1.21e-10;33!UBERON:0004571;1.21e-10;33!UBERON:0006555;7.49e-10;15!UBERON:0004819;7.49e-10;15!UBERON:0001285;7.49e-10;15!UBERON:0007684;7.49e-10;15!UBERON:0007500;1.06e-09;56!UBERON:0001981;1.06e-09;56!UBERON:0004537;1.06e-09;56!UBERON:0000055;1.37e-09;65!UBERON:0000353;1.64e-09;15!UBERON:0002049;1.89e-08;75!UBERON:0007798;1.89e-08;75!UBERON:0001225;7.24e-08;12!UBERON:0008987;7.24e-08;12!UBERON:0004211;1.63e-07;10!UBERON:0009773;1.63e-07;10!UBERON:0001231;1.63e-07;10!UBERON:0004810;1.63e-07;10!UBERON:0000025;1.99e-07;93!UBERON:0006554;2.04e-07;30!UBERON:0001008;2.04e-07;30!UBERON:0004638;2.07e-07;18!UBERON:0001986;2.07e-07;18!UBERON:0004852;2.07e-07;18!UBERON:0000947;2.85e-07;21!UBERON:0010191;2.85e-07;21!UBERON:0000487;4.36e-07;22!UBERON:0000490;5.48e-07;33!UBERON:0002113;9.51e-07;24!UBERON:0011143;9.51e-07;24 | |||
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| ||
|short_description=p1@MGAT4B | |||
}} | }} |
Latest revision as of 09:27, 17 September 2015
Short description: | p1@MGAT4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MGAT4B_5end |
Coexpression cluster: | C4488_Alveolar_Renal_Mesenchymal_leiomyoma_Hepatocyte_tubular_small |
Association with transcript: | 60bp_to_ENST00000292591_5end |
EntrezGene: | MGAT4B |
HGNC: | 7048 |
UniProt: | Q9UQ53 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.09e-36 | 250 |
mesodermal cell | 3.43e-31 | 121 |
epithelial cell | 5.66e-29 | 253 |
lining cell | 3.92e-19 | 58 |
barrier cell | 3.92e-19 | 58 |
meso-epithelial cell | 3.88e-14 | 45 |
endothelial cell | 3.92e-13 | 36 |
smooth muscle cell | 1.81e-11 | 43 |
smooth muscle myoblast | 1.81e-11 | 43 |
muscle precursor cell | 1.09e-10 | 58 |
myoblast | 1.09e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.09e-10 | 58 |
vascular associated smooth muscle cell | 4.41e-10 | 32 |
squamous epithelial cell | 4.78e-10 | 63 |
muscle cell | 7.40e-10 | 55 |
epithelial cell of nephron | 7.53e-10 | 15 |
endothelial cell of vascular tree | 1.21e-09 | 24 |
kidney cell | 3.95e-09 | 17 |
kidney epithelial cell | 3.95e-09 | 17 |
electrically responsive cell | 8.67e-09 | 61 |
electrically active cell | 8.67e-09 | 61 |
fibroblast | 3.92e-08 | 76 |
kidney cortical cell | 7.27e-08 | 12 |
renal cortical epithelial cell | 7.27e-08 | 12 |
mesothelial cell | 8.05e-08 | 19 |
kidney tubule cell | 1.66e-07 | 10 |
nephron tubule epithelial cell | 1.66e-07 | 10 |
blood vessel endothelial cell | 2.15e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.15e-07 | 18 |