FFCP PHASE1:Hg19::chr11:2160019..2160028,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:2160019..2160028,- to FFCP PHASE1:Hg19::chr11:2160019..2160028,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=175bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | |||
|cluster_id=chr11:2160019..2160028,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_48_at_IGF2_5end | |||
|id=chr11:2160019..2160028,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.75e-20;19!CL:0002541;1.46e-11;3!CL:0002575;4.23e-08;2!CL:0002536;7.13e-08;2!CL:0002537;3.79e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.09e-20,19;CL:0002541,1.72e-11,3;CL:0002575,4.46e-08,2;CL:0002536,7.51e-08,2;CL:0002537,3.63e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.89e-08;11!UBERON:0009497;9.72e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!7.58e-14!14;UBERON:0000158!7.58e-14!14;UBERON:0004119!3.01e-11!169;UBERON:0000925!3.01e-11!169;UBERON:0006595!3.01e-11!169;UBERON:0001007!3.54e-10!155;UBERON:0001555!3.54e-10!155;UBERON:0007026!3.54e-10!155;UBERON:0000478!1.90e-09!24;UBERON:0000481!9.46e-09!347;UBERON:0004921!1.29e-08!129;UBERON:0004185!1.29e-08!129;UBERON:0003124!6.61e-08!7;UBERON:0001046!7.34e-08!19;UBERON:0000305!1.48e-07!7;UBERON:0000077!5.58e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;3.97e-22;24!UBERON:0005631;7.79e-22;10!UBERON:0000158;7.79e-22;10!UBERON:0000305;1.22e-12;7!UBERON:0003124;1.46e-11;3!UBERON:0000920;1.46e-11;3!UBERON:0000922;6.02e-11;49!UBERON:0001987;2.42e-08;4!UBERON:0005409;6.34e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.13e-28,14;UBERON:0000158,2.13e-28,14;UBERON:0000478,4.52e-22,24;UBERON:0003124,1.23e-17,7;UBERON:0000305,1.20e-12,7;UBERON:0000920,1.72e-11,3;UBERON:0004871,5.09e-11,8;UBERON:0001987,2.64e-08,4;UBERON:0004340,2.64e-08,4;UBERON:0004923,3.35e-08,66;UBERON:0005409,7.61e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,2.40285509343189,6.59417445571134,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.605429710579726,3.45705554687999,0,0,0,0,0,0,0,0,0.122834317311768,0,1.18800285728205,1.23633464639278,0,0,0.168336113954066,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69716365721711,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,5.78045661152634,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0,1.41849132023278,0,0.428933980974443,4.88359444852299,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0.542530047399471,0.415941723061614,0,0,0.117141414992713,0,0,0,0,0,0,3.32861967686659,9.60801586670397,0,0,0,1.21251028578504,0,8.46692821323105,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,13.5362583542617,0.200506470303285,0.0920809889358963,0,0,0.393373244878272,0.451199612907412,0,0,0,0,1.13733384070897,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0.438519753291869,0,0,0,0,1.54561517471583,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0,0,0.290033387828457,0,2.49289699810865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0,0.589062011728432,0,0,0,0.48763373908959,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,2.44773882019626,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,10.2660128437207,6.83018765915069,10.7506245734731,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.538651809526579,0,3.22789466143284,0,0,12.1220440698129,2.01514705484097,53.3034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,1.22206028986725,0,0,0,0,18.4592858878721,0,0,0,0,0,3.62972148145992,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,3.16373037092745,0,0,0,0,0,0,2.59752492456769,0,0,17.1594997861965,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0.687481272035051,1.43574604915363,0.798716001995964,0,0,1.94832070211506,0,0,9.76911460609573,6.42843695373098,9.77351385885681,3.44496185301621,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.83927341015997,0.105600336519406,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,26.5013777824443,0.129282956361551,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,1.13503190713367,0,0,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0.322951291263702,0,0,0.11796972334774,0,0,0,0,2.3869946653953,0.752103283492572,0,0,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0.227662191351298,6.56397539203527,0,0,0,0,0,0.111231401892069,0.235479278551542,0,1.12108865325516,2.73947616152849,0,0,0.500335809236594,0,0,3.99874026295933,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0.513314034281235,34.794432940146,13.1141968125968,0,5.76957247967968,0,0,0,0,0.0771741581079447,2.18559560503957,0,0.245148321753905,0.235676547101626,0.588925401344836,0,1.6906229103336,0,0,0.128915775947154,0,0,0,0,2.92134555298607,0,0.143339583151451,0,0,0.872701380680755,3.1741610430924,0,0.462175628631418,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.213233981900981,7.85612623830343,0.129177819672012,0.31037357147929,0,0.12729431655633,2.62752345645685,0.653150243690884,28.7475972911636,0.0673520530145875,0.0717222053926763,6.65320713092027,0.325613074443898,0,1.9307228228694,1.16772762738563,16.4248659682418,0,4.06896178315738,1.99727032255654,0,0 | 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| ||
|short_description=p48@IGF2 | |||
}} | }} |
Latest revision as of 08:31, 17 September 2015
Short description: | p48@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_48_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 175bp_to_ENST00000381406, NM_000612, uc001lvg.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.09e-20 | 19 |
chorionic membrane mesenchymal stem cell | 1.72e-11 | 3 |
central nervous system pericyte | 4.46e-08 | 2 |
amniotic epithelial cell | 7.51e-08 | 2 |
amnion mesenchymal stem cell | 3.63e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.13e-28 | 14 |
membranous layer | 2.13e-28 | 14 |
extraembryonic structure | 4.52e-22 | 24 |
chorion | 1.23e-17 | 7 |
amnion | 1.20e-12 | 7 |
egg chorion | 1.72e-11 | 3 |
somatic layer of lateral plate mesoderm | 5.09e-11 | 8 |
placenta | 2.64e-08 | 4 |
allantois | 2.64e-08 | 4 |
organ component layer | 3.35e-08 | 66 |
gastrointestinal system | 7.61e-07 | 25 |