FFCP PHASE1:Hg19::chr11:2159697..2159702,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:2159697..2159702,-
|short_description=p58@IGF2
|description=CAGE_peak_58_at_IGF2_5end
|association_with_transcript=-66bp_to_AK126688_5end
|EntrezGene=348...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=-66bp_to_AK126688_5end | |||
|cluster_id=chr11:2159697..2159702,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_58_at_IGF2_5end | |||
|id=chr11:2159697..2159702,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.78e-48;19!CL:0002537;7.04e-19;5!CL:0002577;2.98e-18;3!CL:0002541;4.73e-18;3!CL:0002536;7.66e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.36e-48,19;CL:0002537,9.93e-19,5;CL:0002577,3.08e-18,3;CL:0002541,3.46e-18,3;CL:0002536,1.33e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.50e-07;1!UBERON:0003124;9.50e-07;1!UBERON:0010115;9.50e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.83e-19!14;UBERON:0000158!1.83e-19!14;UBERON:0000478!2.82e-13!24;UBERON:0003124!2.12e-12!7;UBERON:0004119!1.02e-11!169;UBERON:0000925!1.02e-11!169;UBERON:0006595!1.02e-11!169;UBERON:0004923!2.27e-09!57;UBERON:0000305!7.07e-09!7;UBERON:0004921!5.71e-08!129;UBERON:0004185!5.71e-08!129;UBERON:0007023!7.78e-08!115;UBERON:0001987!9.54e-08!4;UBERON:0004340!9.54e-08!4;UBERON:0004871!1.29e-07!8;UBERON:0001007!3.04e-07!155;UBERON:0001555!3.04e-07!155;UBERON:0007026!3.04e-07!155;UBERON:0000077!3.67e-07!130;UBERON:0005911!4.38e-07!82;UBERON:0000162!5.92e-07!14;UBERON:0001353!5.92e-07!14;UBERON:0000163!5.92e-07!14;UBERON:0006866!5.92e-07!14;UBERON:0000164!5.92e-07!14;UBERON:0000931!5.92e-07!14;UBERON:0001046!6.94e-07!19;UBERON:0001008!8.36e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;3.82e-50;24!UBERON:0005631;8.97e-45;10!UBERON:0000158;8.97e-45;10!UBERON:0000305;9.73e-29;7!UBERON:0001987;2.82e-23;4!UBERON:0003124;4.73e-18;3!UBERON:0000920;4.73e-18;3!UBERON:0000077;4.25e-07;27!UBERON:0002363;9.50e-07;1!UBERON:0007029;9.50e-07;1!UBERON:0000996;9.50e-07;1!UBERON:0001301;9.50e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.39e-66,14;UBERON:0000158,5.39e-66,14;UBERON:0000478,4.36e-50,24;UBERON:0003124,1.16e-39,7;UBERON:0000305,2.27e-28,7;UBERON:0004871,9.13e-25,8;UBERON:0001987,2.92e-23,4;UBERON:0004340,2.92e-23,4;UBERON:0000920,3.46e-18,3;UBERON:0004923,7.27e-14,66;UBERON:0001008,6.63e-10,48;UBERON:0006554,3.18e-08,47;UBERON:0004175,1.25e-07,25;UBERON:0001301,6.02e-07,1;UBERON:0007029,7.57e-07,1;UBERON:0002363,8.02e-07,1;UBERON:0007645,8.02e-07,1;UBERON:0007647,8.02e-07,1;UBERON:0010115,8.02e-07,1;UBERON:0000996,8.98e-07,1 | |||
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| ||
|short_description=p58@IGF2 | |||
}} | }} |
Latest revision as of 08:18, 17 September 2015
Short description: | p58@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_58_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -66bp_to_AK126688_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.36e-48 | 19 |
amnion mesenchymal stem cell | 9.93e-19 | 5 |
placental epithelial cell | 3.08e-18 | 3 |
chorionic membrane mesenchymal stem cell | 3.46e-18 | 3 |
amniotic epithelial cell | 1.33e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.39e-66 | 14 |
membranous layer | 5.39e-66 | 14 |
extraembryonic structure | 4.36e-50 | 24 |
chorion | 1.16e-39 | 7 |
amnion | 2.27e-28 | 7 |
somatic layer of lateral plate mesoderm | 9.13e-25 | 8 |
placenta | 2.92e-23 | 4 |
allantois | 2.92e-23 | 4 |
egg chorion | 3.46e-18 | 3 |
organ component layer | 7.27e-14 | 66 |
renal system | 6.63e-10 | 48 |
urinary system structure | 3.18e-08 | 47 |
internal genitalia | 1.25e-07 | 25 |
epididymis | 6.02e-07 | 1 |
surface | 7.57e-07 | 1 |
dura mater | 8.02e-07 | 1 |
future meninx | 8.02e-07 | 1 |
ectomeninx | 8.02e-07 | 1 |
future dura mater | 8.02e-07 | 1 |
vagina | 8.98e-07 | 1 |