FFCP PHASE1:Hg19::chr4:21699380..21699386,-: Difference between revisions
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|id=chr4:21699380..21699386,-
|short_description=p20@KCNIP4
|description=CAGE_peak_20_at_KCNIP4_5end
|association_with_transcript=10bp_to_ENST00000382148_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80333 | |EntrezGene=80333 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30083 | |HGNC=30083 | ||
|TSSclassifier=strong | |||
|UniProt=Q3YAB9 | |UniProt=Q3YAB9 | ||
|association_with_transcript=10bp_to_ENST00000382148_5end | |||
|cluster_id=chr4:21699380..21699386,- | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_20_at_KCNIP4_5end | |||
|id=chr4:21699380..21699386,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;8.28e-14;2!CL:0000242;8.28e-14;2!CL:0002253;1.21e-13;2!CL:0002563;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,8.28e-14,2;CL:0002253,1.21e-13,2;CL:0002563,1.80e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!3.92e-23!15;UBERON:0003057!3.92e-23!15;UBERON:0001049!7.58e-21!57;UBERON:0005068!7.58e-21!57;UBERON:0006241!7.58e-21!57;UBERON:0007135!7.58e-21!57;UBERON:0007023!5.54e-20!115;UBERON:0003075!1.49e-19!86;UBERON:0007284!1.49e-19!86;UBERON:0002346!1.81e-18!90;UBERON:0005743!2.14e-17!86;UBERON:0000073!3.69e-17!94;UBERON:0001016!3.69e-17!94;UBERON:0001017!1.41e-16!82;UBERON:0000988!1.31e-14!3;UBERON:0002240!1.80e-14!3;UBERON:0002616!2.23e-13!59;UBERON:0004733!3.73e-13!12;UBERON:0002028!3.73e-13!12;UBERON:0007277!3.73e-13!12;UBERON:0002680!1.65e-12!9;UBERON:0001895!1.65e-12!9;UBERON:0010092!1.65e-12!9;UBERON:0000955!2.00e-12!69;UBERON:0006238!2.00e-12!69;UBERON:0004732!4.28e-12!13;UBERON:0004121!1.59e-11!169;UBERON:0000924!3.95e-11!173;UBERON:0006601!3.95e-11!173;UBERON:0002148!2.32e-10!2;UBERON:0009662!2.32e-10!2;UBERON:0002298!1.90e-09!8;UBERON:0005174!7.27e-09!5;UBERON:0001137!7.27e-09!5;UBERON:0000033!2.15e-08!123;UBERON:0000063!2.64e-08!97;UBERON:0000153!7.96e-08!129;UBERON:0007811!7.96e-08!129;UBERON:0000483!9.20e-08!309;UBERON:0003056!9.86e-08!61;UBERON:0000119!1.27e-07!312;UBERON:0006331!3.59e-07!3;UBERON:0000059!5.13e-07!11;UBERON:0002780!5.31e-07!41;UBERON:0001890!5.31e-07!41;UBERON:0006240!5.31e-07!41;UBERON:0000064!6.37e-07!219;UBERON:0000025!6.47e-07!194;UBERON:0003080!8.36e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;8.66e-26;4!UBERON:0003296;1.62e-25;4!UBERON:0010133;1.62e-25;4!UBERON:0004907;7.35e-21;5!UBERON:0001894;4.69e-15;7!UBERON:0001905;1.21e-13;2!UBERON:0000007;1.21e-13;2!UBERON:0002757;1.21e-13;2!UBERON:0010134;1.21e-13;2!UBERON:0005408;1.21e-13;2!UBERON:0001899;1.21e-13;2!UBERON:0000059;4.83e-10;11!UBERON:0001242;1.80e-07;4!UBERON:0001262;1.80e-07;4!UBERON:0004786;1.80e-07;4!UBERON:0004808;1.80e-07;4!UBERON:0002784;1.80e-07;4!UBERON:0001277;1.80e-07;4!UBERON:0002368;2.73e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,8.66e-26,4;UBERON:0003296,1.62e-25,4;UBERON:0010133,1.62e-25,4;UBERON:0004907,7.35e-21,5;UBERON:0001894,4.69e-15,7;UBERON:0006222,4.69e-15,7;UBERON:0001905,9.40e-14,2;UBERON:0002757,9.40e-14,2;UBERON:0010134,9.40e-14,2;UBERON:0005408,9.40e-14,2;UBERON:0001899,9.40e-14,2;UBERON:0000007,1.55e-13,2;UBERON:0000059,4.83e-10,11;UBERON:0002784,1.59e-07,4;UBERON:0001242,1.80e-07,4;UBERON:0001262,1.80e-07,4;UBERON:0004786,1.80e-07,4;UBERON:0004808,1.80e-07,4;UBERON:0001277,1.80e-07,4;UBERON:0002368,5.19e-07,35 | |||
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| ||
|short_description=p20@KCNIP4 | |||
}} | }} |
Latest revision as of 08:13, 17 September 2015
Short description: | p20@KCNIP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_KCNIP4_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | 10bp_to_ENST00000382148_5end |
EntrezGene: | KCNIP4 |
HGNC: | 30083 |
UniProt: | Q3YAB9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 8.28e-14 | 2 |
epithelial cell of large intestine | 1.21e-13 | 2 |
intestinal epithelial cell | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 8.66e-26 | 4 |
gland of diencephalon | 1.62e-25 | 4 |
neuroendocrine gland | 1.62e-25 | 4 |
lower digestive tract | 7.35e-21 | 5 |
diencephalon | 4.69e-15 | 7 |
future diencephalon | 4.69e-15 | 7 |
pineal body | 9.40e-14 | 2 |
regional part of epithalamus | 9.40e-14 | 2 |
secretory circumventricular organ | 9.40e-14 | 2 |
circumventricular organ | 9.40e-14 | 2 |
epithalamus | 9.40e-14 | 2 |
pituitary gland | 1.55e-13 | 2 |
large intestine | 4.83e-10 | 11 |
regional part of diencephalon | 1.59e-07 | 4 |
intestinal mucosa | 1.80e-07 | 4 |
wall of intestine | 1.80e-07 | 4 |
gastrointestinal system mucosa | 1.80e-07 | 4 |
gastrointestinal system epithelium | 1.80e-07 | 4 |
intestinal epithelium | 1.80e-07 | 4 |
endocrine gland | 5.19e-07 | 35 |