FFCP PHASE1:Hg19::chr11:2154832..2154852,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=51bp_to_uc001lvf.2_5end | |association_with_transcript=51bp_to_uc001lvf.2_5end | ||
|cluster_id=chr11:2154832..2154852,- | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_44_at_IGF2_5end | |description=CAGE_peak_44_at_IGF2_5end | ||
|id=chr11:2154832..2154852,- | |id=chr11:2154832..2154852,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.36e-19;19!CL:0000197;1.92e-08;6!CL:0000098;1.92e-08;6!CL:0002167;1.92e-08;6!CL:0002541;2.92e-08;3!CL:0002577;3.69e-08;3!CL:0002537;5.45e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.48e-19,19;CL:0000197,1.27e-08,6;CL:0000098,1.27e-08,6;CL:0002167,1.27e-08,6;CL:0002541,2.83e-08,3;CL:0002577,3.75e-08,3;CL:0002537,7.70e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0003104;5.63e-08;31!UBERON:0004161;3.44e-07;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.27e-16!14;UBERON:0000158!4.27e-16!14;UBERON:0000478!3.15e-10!24;UBERON:0003124!3.11e-09!7;UBERON:0004119!1.15e-08!169;UBERON:0000925!1.15e-08!169;UBERON:0006595!1.15e-08!169;UBERON:0000305!1.67e-08!7;UBERON:0004923!3.41e-08!57;UBERON:0004871!3.36e-07!8 | |ontology_enrichment_uberon=UBERON:0005631!4.27e-16!14;UBERON:0000158!4.27e-16!14;UBERON:0000478!3.15e-10!24;UBERON:0003124!3.11e-09!7;UBERON:0004119!1.15e-08!169;UBERON:0000925!1.15e-08!169;UBERON:0006595!1.15e-08!169;UBERON:0000305!1.67e-08!7;UBERON:0004923!3.41e-08!57;UBERON:0004871!3.36e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.16e-19;24!UBERON:0005631;1.16e-18;10!UBERON:0000158;1.16e-18;10!UBERON:0000305;3.24e-12;7!UBERON:0001987;3.12e-10;4!UBERON:0003124;2.92e-08;3!UBERON:0000920;2.92e-08;3!UBERON:0002107;4.20e-08;19!UBERON:0006925;4.20e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.60e-27,14;UBERON:0000158,5.60e-27,14;UBERON:0000478,1.51e-19,24;UBERON:0003124,8.28e-17,7;UBERON:0000305,4.77e-12,7;UBERON:0004871,1.98e-10,8;UBERON:0001987,3.17e-10,4;UBERON:0004340,3.17e-10,4;UBERON:0004923,7.82e-09,66;UBERON:0000920,2.83e-08,3;UBERON:0002107,3.93e-08,19;UBERON:0006925,3.93e-08,19;UBERON:0008836,3.93e-08,19;UBERON:0008835,8.83e-07,22;UBERON:0003894,8.83e-07,22 | |||
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| ||
|short_description=p44@IGF2 | |short_description=p44@IGF2 | ||
}} | }} |
Latest revision as of 08:05, 17 September 2015
Short description: | p44@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_44_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 51bp_to_uc001lvf.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.48e-19 | 19 |
receptor cell | 1.27e-08 | 6 |
sensory epithelial cell | 1.27e-08 | 6 |
olfactory epithelial cell | 1.27e-08 | 6 |
chorionic membrane mesenchymal stem cell | 2.83e-08 | 3 |
placental epithelial cell | 3.75e-08 | 3 |
amnion mesenchymal stem cell | 7.70e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.60e-27 | 14 |
membranous layer | 5.60e-27 | 14 |
extraembryonic structure | 1.51e-19 | 24 |
chorion | 8.28e-17 | 7 |
amnion | 4.77e-12 | 7 |
somatic layer of lateral plate mesoderm | 1.98e-10 | 8 |
placenta | 3.17e-10 | 4 |
allantois | 3.17e-10 | 4 |
organ component layer | 7.82e-09 | 66 |
egg chorion | 2.83e-08 | 3 |
liver | 3.93e-08 | 19 |
digestive gland | 3.93e-08 | 19 |
liver bud | 3.93e-08 | 19 |
hepatic diverticulum | 8.83e-07 | 22 |
liver primordium | 8.83e-07 | 22 |