FFCP PHASE1:Hg19::chr20:58411012..58411026,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:58411012..58411026,+ to FFCP PHASE1:Hg19::chr20:58411012..58411026,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116154 | |EntrezGene=116154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15833 | |HGNC=15833 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-40bp_to_uc002yay.2_5end | |||
|cluster_id=chr20:58411012..58411026,+ | |||
|coexpression_cluster_id=C4057 | |||
|description=CAGE_peak_7_at_PHACTR3_5end | |||
|id=chr20:58411012..58411026,+ | |||
|ontology_enrichment_celltype=CL:0002368!6.21e-08!13;CL:0002076!2.39e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002336;2.42e-07;1!CL:0002261;2.42e-07;1!CL:0002553;2.42e-07;1!CL:0002170;2.42e-07;1!CL:0002327;3.56e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002336,2.07e-07,1;CL:0002261,2.07e-07,1;CL:0002170,2.07e-07,1;CL:0002553,2.50e-07,1;CL:0002327,5.07e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.18e-13;2!UBERON:0004140;2.42e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3111;2.42e-07;1!DOID:3603;2.42e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,1.42e-07,1;DOID:3603,1.42e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.72e-46!57;UBERON:0005068!1.72e-46!57;UBERON:0006241!1.72e-46!57;UBERON:0007135!1.72e-46!57;UBERON:0002616!2.73e-39!59;UBERON:0002780!5.47e-39!41;UBERON:0001890!5.47e-39!41;UBERON:0006240!5.47e-39!41;UBERON:0003080!7.56e-38!42;UBERON:0007023!2.66e-36!115;UBERON:0000955!1.77e-35!69;UBERON:0006238!1.77e-35!69;UBERON:0001017!1.13e-33!82;UBERON:0005743!4.19e-33!86;UBERON:0000073!3.13e-30!94;UBERON:0001016!3.13e-30!94;UBERON:0003075!5.79e-30!86;UBERON:0007284!5.79e-30!86;UBERON:0001893!7.16e-30!34;UBERON:0002020!7.46e-30!34;UBERON:0003528!7.46e-30!34;UBERON:0002791!2.40e-28!33;UBERON:0002346!4.42e-28!90;UBERON:0001869!1.57e-26!32;UBERON:0003056!7.94e-25!61;UBERON:0000033!1.58e-20!123;UBERON:0000153!3.59e-20!129;UBERON:0007811!3.59e-20!129;UBERON:0004121!8.70e-19!169;UBERON:0002619!1.01e-18!22;UBERON:0000924!5.05e-18!173;UBERON:0006601!5.05e-18!173;UBERON:0002308!1.97e-17!9;UBERON:0000125!1.97e-17!9;UBERON:0000956!4.90e-16!25;UBERON:0000203!4.90e-16!25;UBERON:0001950!2.65e-15!20;UBERON:0002420!5.53e-14!9;UBERON:0007245!5.53e-14!9;UBERON:0010009!5.53e-14!9;UBERON:0010011!5.53e-14!9;UBERON:0000454!5.53e-14!9;UBERON:0009663!5.86e-14!7;UBERON:0000025!3.79e-13!194;UBERON:0000200!3.55e-12!6;UBERON:0004111!8.50e-12!241;UBERON:0000064!6.51e-11!219;UBERON:0001894!8.97e-11!7;UBERON:0006222!8.97e-11!7;UBERON:0000477!1.54e-10!286;UBERON:0000483!2.38e-10!309;UBERON:0000119!4.25e-10!312;UBERON:0003076!8.45e-10!15;UBERON:0003057!8.45e-10!15;UBERON:0002298!5.61e-09!8;UBERON:0000062!2.67e-08!511;UBERON:0000369!3.15e-08!4;UBERON:0002435!3.15e-08!4;UBERON:0000204!3.15e-08!4;UBERON:0010082!3.15e-08!4;UBERON:0004733!1.52e-07!12;UBERON:0002028!1.52e-07!12;UBERON:0007277!1.52e-07!12;UBERON:0000475!2.21e-07!365;UBERON:0000349!2.39e-07!5;UBERON:0002771!3.75e-07!3;UBERON:0006331!5.52e-07!3;UBERON:0004732!7.17e-07!13;UBERON:0000481!9.43e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.03e-30;41!UBERON:0001890;1.03e-30;41!UBERON:0000073;2.65e-25;53!UBERON:0002616;2.65e-25;53!UBERON:0002420;1.64e-23;9!UBERON:0007245;1.64e-23;9!UBERON:0010009;1.64e-23;9!UBERON:0010011;1.64e-23;9!UBERON:0000454;1.64e-23;9!UBERON:0009663;2.64e-21;7!UBERON:0002791;6.77e-21;32!UBERON:0001893;1.66e-20;34!UBERON:0003528;9.78e-19;34!UBERON:0002020;9.78e-19;34!UBERON:0001869;7.58e-18;32!UBERON:0000125;1.53e-16;9!UBERON:0002308;1.53e-16;9!UBERON:0001894;1.11e-14;7!UBERON:0001897;8.02e-14;2!UBERON:0010225;8.02e-14;2!UBERON:0001954;9.39e-14;2!UBERON:0003022;9.39e-14;2!UBERON:0002421;9.39e-14;2!UBERON:0002600;9.39e-14;2!UBERON:0000007;1.65e-13;2!UBERON:0001873;5.18e-13;2!UBERON:0002702;5.18e-13;2!UBERON:0001875;5.18e-13;2!UBERON:0006514;5.18e-13;2!UBERON:0000955;1.18e-12;68!UBERON:0002619;3.64e-12;22!UBERON:0000349;7.73e-12;5!UBERON:0001017;1.90e-11;75!UBERON:0000956;1.16e-10;25!UBERON:0000203;1.16e-10;25!UBERON:0001016;4.53e-10;83!UBERON:0000200;1.38e-09;6!UBERON:0001896;5.72e-09;3!UBERON:0001870;5.72e-09;3!UBERON:0005383;5.72e-09;3!UBERON:0005290;5.72e-09;3!UBERON:0005382;5.72e-09;3!UBERON:0002336;2.42e-07;1!UBERON:0002038;2.42e-07;1!UBERON:0003112;2.42e-07;1!UBERON:0011215;2.42e-07;1!UBERON:0001018;2.42e-07;1!UBERON:0011158;2.42e-07;1!UBERON:0009661;2.42e-07;1!UBERON:0002950;2.42e-07;1!UBERON:0002473;2.42e-07;1!UBERON:0005340;2.42e-07;1!UBERON:0003544;2.42e-07;1!UBERON:0005970;2.42e-07;1!UBERON:0002316;2.42e-07;1!UBERON:0001020;2.42e-07;1!UBERON:0003128;2.42e-07;1!UBERON:0001891;2.42e-07;1!UBERON:0002437;2.42e-07;1!UBERON:0001703;2.42e-07;1!UBERON:0002241;2.42e-07;1!UBERON:0002784;2.50e-07;4!UBERON:0001911;3.56e-07;4!UBERON:0003296;3.56e-07;4!UBERON:0010133;3.56e-07;4!UBERON:0001950;5.69e-07;20!UBERON:0000369;6.25e-07;4!UBERON:0002435;6.25e-07;4!UBERON:0000204;6.25e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.01e-38,56;UBERON:0005068,1.01e-38,56;UBERON:0006241,1.01e-38,56;UBERON:0007135,1.01e-38,56;UBERON:0002780,3.25e-38,41;UBERON:0001890,3.25e-38,41;UBERON:0003080,3.25e-38,41;UBERON:0006240,3.25e-38,41;UBERON:0000073,9.49e-37,53;UBERON:0002616,9.49e-37,53;UBERON:0000955,1.90e-27,68;UBERON:0006238,1.90e-27,68;UBERON:0001893,1.65e-26,34;UBERON:0001017,2.71e-25,81;UBERON:0003075,2.71e-25,82;UBERON:0007284,2.71e-25,82;UBERON:0003056,9.43e-25,61;UBERON:0002791,4.85e-24,32;UBERON:0002346,6.12e-24,86;UBERON:0010371,1.19e-23,104;UBERON:0002420,1.46e-23,9;UBERON:0007245,1.46e-23,9;UBERON:0010009,1.46e-23,9;UBERON:0010011,1.46e-23,9;UBERON:0000454,1.46e-23,9;UBERON:0003528,1.55e-22,34;UBERON:0002020,1.55e-22,34;UBERON:0001016,2.06e-22,89;UBERON:0009663,3.51e-21,7;UBERON:0001869,3.35e-20,32;UBERON:0010314,1.23e-17,132;UBERON:0007023,2.71e-17,114;UBERON:0004121,6.21e-17,171;UBERON:0000924,6.21e-17,171;UBERON:0006601,6.21e-17,171;UBERON:0000125,1.90e-16,9;UBERON:0002308,1.90e-16,9;UBERON:0001894,1.56e-14,7;UBERON:0006222,1.56e-14,7;UBERON:0001897,8.06e-14,2;UBERON:0010225,8.06e-14,2;UBERON:0001954,8.58e-14,2;UBERON:0003022,8.58e-14,2;UBERON:0002421,8.58e-14,2;UBERON:0002600,8.58e-14,2;UBERON:0000025,2.29e-13,192;UBERON:0000007,2.99e-13,2;UBERON:0001875,3.18e-13,2;UBERON:0006514,3.18e-13,2;UBERON:0011216,4.32e-13,223;UBERON:0002702,6.25e-13,2;UBERON:0001873,7.96e-13,2;UBERON:0010122,7.96e-13,2;UBERON:0002619,3.29e-12,22;UBERON:0004111,4.94e-12,240;UBERON:0000349,5.17e-12,5;UBERON:0000956,1.06e-10,25;UBERON:0000203,1.06e-10,25;UBERON:0000200,1.45e-09,6;UBERON:0001896,2.33e-09,3;UBERON:0005290,2.33e-09,3;UBERON:0010096,2.33e-09,3;UBERON:0000483,2.81e-09,306;UBERON:0000119,3.89e-09,309;UBERON:0001870,6.47e-09,3;UBERON:0005383,7.60e-09,3;UBERON:0005382,7.60e-09,3;UBERON:0002784,2.50e-07,4;UBERON:0002336,3.20e-07,1;UBERON:0011215,3.20e-07,1;UBERON:0001018,3.20e-07,1;UBERON:0002473,3.20e-07,1;UBERON:0005340,3.20e-07,1;UBERON:0003544,3.20e-07,1;UBERON:0005970,3.20e-07,1;UBERON:0002316,3.20e-07,1;UBERON:0001020,3.20e-07,1;UBERON:0002437,3.20e-07,1;UBERON:0003112,3.62e-07,1;UBERON:0011158,3.62e-07,1;UBERON:0003128,3.62e-07,1;UBERON:0001703,3.62e-07,1;UBERON:0002241,3.62e-07,1;UBERON:0004761,3.62e-07,1;UBERON:0009617,3.62e-07,1;UBERON:0002038,3.84e-07,1;UBERON:0009661,3.84e-07,1;UBERON:0002950,3.84e-07,1;UBERON:0001891,3.84e-07,1;UBERON:0009616,3.84e-07,1;UBERON:0010286,3.84e-07,1;UBERON:0003296,4.77e-07,4;UBERON:0010133,4.77e-07,4;UBERON:0001911,5.07e-07,4;UBERON:0005333,5.07e-07,4;UBERON:0008425,5.07e-07,4;UBERON:0005311,5.07e-07,4;UBERON:0001950,5.37e-07,20;UBERON:0000369,7.72e-07,4;UBERON:0002435,7.72e-07,4;UBERON:0000204,7.72e-07,4;UBERON:0010082,7.72e-07,4 | |||
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| ||
|short_description=p7@PHACTR3 | |||
}} | }} |
Latest revision as of 08:03, 17 September 2015
Short description: | p7@PHACTR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PHACTR3_5end |
Coexpression cluster: | C4057_prostate_smallcell_Mammary_mucinous_pituitary_Keratinocyte_bile |
Association with transcript: | -40bp_to_uc002yay.2_5end |
EntrezGene: | PHACTR3 |
HGNC: | 15833 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
buccal mucosa cell | 2.07e-07 | 1 |
endothelial cell of viscerocranial mucosa | 2.07e-07 | 1 |
keratinized cell of the oral mucosa | 2.07e-07 | 1 |
lung fibroblast | 2.50e-07 | 1 |
mammary gland epithelial cell | 5.07e-07 | 4 |
Ontology term | p-value | n |
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