FFCP PHASE1:Hg19::chr20:58411012..58411026,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116154 | |EntrezGene=116154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15833 | |HGNC=15833 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-40bp_to_uc002yay.2_5end | |association_with_transcript=-40bp_to_uc002yay.2_5end | ||
|cluster_id=chr20:58411012..58411026,+ | |||
|coexpression_cluster_id=C4057 | |coexpression_cluster_id=C4057 | ||
|description=CAGE_peak_7_at_PHACTR3_5end | |description=CAGE_peak_7_at_PHACTR3_5end | ||
|id=chr20:58411012..58411026,+ | |id=chr20:58411012..58411026,+ | ||
|ontology_enrichment_celltype=CL:0002368!6.21e-08!13;CL:0002076!2.39e-07!43 | |ontology_enrichment_celltype=CL:0002368!6.21e-08!13;CL:0002076!2.39e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002336;2.42e-07;1!CL:0002261;2.42e-07;1!CL:0002553;2.42e-07;1!CL:0002170;2.42e-07;1!CL:0002327;3.56e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002336,2.07e-07,1;CL:0002261,2.07e-07,1;CL:0002170,2.07e-07,1;CL:0002553,2.50e-07,1;CL:0002327,5.07e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.18e-13;2!UBERON:0004140;2.42e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3111;2.42e-07;1!DOID:3603;2.42e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,1.42e-07,1;DOID:3603,1.42e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.72e-46!57;UBERON:0005068!1.72e-46!57;UBERON:0006241!1.72e-46!57;UBERON:0007135!1.72e-46!57;UBERON:0002616!2.73e-39!59;UBERON:0002780!5.47e-39!41;UBERON:0001890!5.47e-39!41;UBERON:0006240!5.47e-39!41;UBERON:0003080!7.56e-38!42;UBERON:0007023!2.66e-36!115;UBERON:0000955!1.77e-35!69;UBERON:0006238!1.77e-35!69;UBERON:0001017!1.13e-33!82;UBERON:0005743!4.19e-33!86;UBERON:0000073!3.13e-30!94;UBERON:0001016!3.13e-30!94;UBERON:0003075!5.79e-30!86;UBERON:0007284!5.79e-30!86;UBERON:0001893!7.16e-30!34;UBERON:0002020!7.46e-30!34;UBERON:0003528!7.46e-30!34;UBERON:0002791!2.40e-28!33;UBERON:0002346!4.42e-28!90;UBERON:0001869!1.57e-26!32;UBERON:0003056!7.94e-25!61;UBERON:0000033!1.58e-20!123;UBERON:0000153!3.59e-20!129;UBERON:0007811!3.59e-20!129;UBERON:0004121!8.70e-19!169;UBERON:0002619!1.01e-18!22;UBERON:0000924!5.05e-18!173;UBERON:0006601!5.05e-18!173;UBERON:0002308!1.97e-17!9;UBERON:0000125!1.97e-17!9;UBERON:0000956!4.90e-16!25;UBERON:0000203!4.90e-16!25;UBERON:0001950!2.65e-15!20;UBERON:0002420!5.53e-14!9;UBERON:0007245!5.53e-14!9;UBERON:0010009!5.53e-14!9;UBERON:0010011!5.53e-14!9;UBERON:0000454!5.53e-14!9;UBERON:0009663!5.86e-14!7;UBERON:0000025!3.79e-13!194;UBERON:0000200!3.55e-12!6;UBERON:0004111!8.50e-12!241;UBERON:0000064!6.51e-11!219;UBERON:0001894!8.97e-11!7;UBERON:0006222!8.97e-11!7;UBERON:0000477!1.54e-10!286;UBERON:0000483!2.38e-10!309;UBERON:0000119!4.25e-10!312;UBERON:0003076!8.45e-10!15;UBERON:0003057!8.45e-10!15;UBERON:0002298!5.61e-09!8;UBERON:0000062!2.67e-08!511;UBERON:0000369!3.15e-08!4;UBERON:0002435!3.15e-08!4;UBERON:0000204!3.15e-08!4;UBERON:0010082!3.15e-08!4;UBERON:0004733!1.52e-07!12;UBERON:0002028!1.52e-07!12;UBERON:0007277!1.52e-07!12;UBERON:0000475!2.21e-07!365;UBERON:0000349!2.39e-07!5;UBERON:0002771!3.75e-07!3;UBERON:0006331!5.52e-07!3;UBERON:0004732!7.17e-07!13;UBERON:0000481!9.43e-07!347 | |ontology_enrichment_uberon=UBERON:0001049!1.72e-46!57;UBERON:0005068!1.72e-46!57;UBERON:0006241!1.72e-46!57;UBERON:0007135!1.72e-46!57;UBERON:0002616!2.73e-39!59;UBERON:0002780!5.47e-39!41;UBERON:0001890!5.47e-39!41;UBERON:0006240!5.47e-39!41;UBERON:0003080!7.56e-38!42;UBERON:0007023!2.66e-36!115;UBERON:0000955!1.77e-35!69;UBERON:0006238!1.77e-35!69;UBERON:0001017!1.13e-33!82;UBERON:0005743!4.19e-33!86;UBERON:0000073!3.13e-30!94;UBERON:0001016!3.13e-30!94;UBERON:0003075!5.79e-30!86;UBERON:0007284!5.79e-30!86;UBERON:0001893!7.16e-30!34;UBERON:0002020!7.46e-30!34;UBERON:0003528!7.46e-30!34;UBERON:0002791!2.40e-28!33;UBERON:0002346!4.42e-28!90;UBERON:0001869!1.57e-26!32;UBERON:0003056!7.94e-25!61;UBERON:0000033!1.58e-20!123;UBERON:0000153!3.59e-20!129;UBERON:0007811!3.59e-20!129;UBERON:0004121!8.70e-19!169;UBERON:0002619!1.01e-18!22;UBERON:0000924!5.05e-18!173;UBERON:0006601!5.05e-18!173;UBERON:0002308!1.97e-17!9;UBERON:0000125!1.97e-17!9;UBERON:0000956!4.90e-16!25;UBERON:0000203!4.90e-16!25;UBERON:0001950!2.65e-15!20;UBERON:0002420!5.53e-14!9;UBERON:0007245!5.53e-14!9;UBERON:0010009!5.53e-14!9;UBERON:0010011!5.53e-14!9;UBERON:0000454!5.53e-14!9;UBERON:0009663!5.86e-14!7;UBERON:0000025!3.79e-13!194;UBERON:0000200!3.55e-12!6;UBERON:0004111!8.50e-12!241;UBERON:0000064!6.51e-11!219;UBERON:0001894!8.97e-11!7;UBERON:0006222!8.97e-11!7;UBERON:0000477!1.54e-10!286;UBERON:0000483!2.38e-10!309;UBERON:0000119!4.25e-10!312;UBERON:0003076!8.45e-10!15;UBERON:0003057!8.45e-10!15;UBERON:0002298!5.61e-09!8;UBERON:0000062!2.67e-08!511;UBERON:0000369!3.15e-08!4;UBERON:0002435!3.15e-08!4;UBERON:0000204!3.15e-08!4;UBERON:0010082!3.15e-08!4;UBERON:0004733!1.52e-07!12;UBERON:0002028!1.52e-07!12;UBERON:0007277!1.52e-07!12;UBERON:0000475!2.21e-07!365;UBERON:0000349!2.39e-07!5;UBERON:0002771!3.75e-07!3;UBERON:0006331!5.52e-07!3;UBERON:0004732!7.17e-07!13;UBERON:0000481!9.43e-07!347 | ||
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|short_description=p7@PHACTR3 | |short_description=p7@PHACTR3 | ||
}} | }} |
Latest revision as of 08:03, 17 September 2015
Short description: | p7@PHACTR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PHACTR3_5end |
Coexpression cluster: | C4057_prostate_smallcell_Mammary_mucinous_pituitary_Keratinocyte_bile |
Association with transcript: | -40bp_to_uc002yay.2_5end |
EntrezGene: | PHACTR3 |
HGNC: | 15833 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
buccal mucosa cell | 2.07e-07 | 1 |
endothelial cell of viscerocranial mucosa | 2.07e-07 | 1 |
keratinized cell of the oral mucosa | 2.07e-07 | 1 |
lung fibroblast | 2.50e-07 | 1 |
mammary gland epithelial cell | 5.07e-07 | 4 |
Ontology term | p-value | n |
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