FFCP PHASE1:Hg19::chr11:2154767..2154781,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=122bp_to_uc001lvf.2_5end | |association_with_transcript=122bp_to_uc001lvf.2_5end | ||
|cluster_id=chr11:2154767..2154781,- | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_36_at_IGF2_5end | |description=CAGE_peak_36_at_IGF2_5end | ||
|id=chr11:2154767..2154781,- | |id=chr11:2154767..2154781,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;7.46e-20;19!CL:0000669;1.42e-08;4!CL:0002541;1.04e-07;3!CL:0002577;1.85e-07;3!CL:0002537;2.75e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.29e-20,19;CL:0000669,2.95e-08,4;CL:0002541,1.06e-07,3;CL:0002577,1.88e-07,3;CL:0002537,3.69e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.91e-15!14;UBERON:0000158!1.91e-15!14;UBERON:0000478!6.24e-11!24;UBERON:0003124!7.03e-09!7;UBERON:0000305!3.36e-08!7;UBERON:0004119!3.53e-08!169;UBERON:0000925!3.53e-08!169;UBERON:0006595!3.53e-08!169;UBERON:0001046!5.99e-07!19;UBERON:0004871!6.40e-07!8;UBERON:0004923!7.77e-07!57 | |ontology_enrichment_uberon=UBERON:0005631!1.91e-15!14;UBERON:0000158!1.91e-15!14;UBERON:0000478!6.24e-11!24;UBERON:0003124!7.03e-09!7;UBERON:0000305!3.36e-08!7;UBERON:0004119!3.53e-08!169;UBERON:0000925!3.53e-08!169;UBERON:0006595!3.53e-08!169;UBERON:0001046!5.99e-07!19;UBERON:0004871!6.40e-07!8;UBERON:0004923!7.77e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.13e-19;24!UBERON:0005631;4.73e-17;10!UBERON:0000158;4.73e-17;10!UBERON:0000305;3.77e-11;7!UBERON:0001987;2.52e-09;4!UBERON:0003124;1.04e-07;3!UBERON:0000920;1.04e-07;3!UBERON:0000922;1.46e-07;49!UBERON:0002107;5.82e-07;19!UBERON:0006925;5.82e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.70e-24,14;UBERON:0000158,1.70e-24,14;UBERON:0000478,1.22e-19,24;UBERON:0003124,2.41e-15,7;UBERON:0000305,5.21e-11,7;UBERON:0004871,1.64e-09,8;UBERON:0001987,2.54e-09,4;UBERON:0004340,2.54e-09,4;UBERON:0004923,2.38e-08,66;UBERON:0000920,1.06e-07,3;UBERON:0002107,5.16e-07,19;UBERON:0006925,5.16e-07,19;UBERON:0008836,5.16e-07,19 | |||
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| ||
|short_description=p36@IGF2 | |short_description=p36@IGF2 | ||
}} | }} |
Latest revision as of 08:03, 17 September 2015
Short description: | p36@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 122bp_to_uc001lvf.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.29e-20 | 19 |
pericyte cell | 2.95e-08 | 4 |
chorionic membrane mesenchymal stem cell | 1.06e-07 | 3 |
placental epithelial cell | 1.88e-07 | 3 |
amnion mesenchymal stem cell | 3.69e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.70e-24 | 14 |
membranous layer | 1.70e-24 | 14 |
extraembryonic structure | 1.22e-19 | 24 |
chorion | 2.41e-15 | 7 |
amnion | 5.21e-11 | 7 |
somatic layer of lateral plate mesoderm | 1.64e-09 | 8 |
placenta | 2.54e-09 | 4 |
allantois | 2.54e-09 | 4 |
organ component layer | 2.38e-08 | 66 |
egg chorion | 1.06e-07 | 3 |
liver | 5.16e-07 | 19 |
digestive gland | 5.16e-07 | 19 |
liver bud | 5.16e-07 | 19 |