FFCP PHASE1:Hg19::chr11:2153165..2153178,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5466 | |||
|TSSclassifier=strong | |||
|UniProt=P09565 | |||
|association_with_transcript=-200bp_to_AF318382_5end | |||
|cluster_id=chr11:2153165..2153178,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_11_at_IGF2_5end | |||
|id=chr11:2153165..2153178,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;5.60e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.56e-11,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!4.71e-16!347;UBERON:0007023!1.17e-14!115;UBERON:0000475!6.54e-13!365;UBERON:0004119!7.46e-12!169;UBERON:0000925!7.46e-12!169;UBERON:0006595!7.46e-12!169;UBERON:0000468!8.50e-12!659;UBERON:0005631!2.26e-11!14;UBERON:0000158!2.26e-11!14;UBERON:0000062!3.10e-10!511;UBERON:0000064!2.07e-09!219;UBERON:0000119!2.71e-09!312;UBERON:0000922!5.07e-09!612;UBERON:0001007!6.66e-09!155;UBERON:0001555!6.66e-09!155;UBERON:0007026!6.66e-09!155;UBERON:0000483!9.38e-09!309;UBERON:0002100!2.69e-08!216;UBERON:0004921!5.39e-08!129;UBERON:0004185!5.39e-08!129;UBERON:0000478!5.89e-08!24;UBERON:0000477!6.22e-08!286;UBERON:0000153!7.71e-08!129;UBERON:0007811!7.71e-08!129;UBERON:0003075!1.45e-07!86;UBERON:0007284!1.45e-07!86;UBERON:0000077!1.49e-07!130;UBERON:0002050!1.78e-07!605;UBERON:0005423!1.78e-07!605;UBERON:0000033!2.46e-07!123;UBERON:0000467!3.35e-07!625;UBERON:0000923!3.51e-07!604;UBERON:0005291!3.51e-07!604;UBERON:0006598!3.51e-07!604;UBERON:0002532!3.51e-07!604;UBERON:0003104!4.16e-07!238;UBERON:0009142!4.16e-07!238;UBERON:0005256!4.29e-07!143;UBERON:0000480!4.46e-07!626;UBERON:0005177!7.32e-07!107;UBERON:0002616!7.50e-07!59;UBERON:0004121!7.54e-07!169;UBERON:0003124!9.93e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;3.05e-10;24!UBERON:0005631;6.35e-10;10!UBERON:0000158;6.35e-10;10!UBERON:0000305;2.92e-07;7!UBERON:0002107;4.44e-07;19!UBERON:0006925;4.44e-07;19!UBERON:0000160;9.33e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.63e-13,14;UBERON:0000158,1.63e-13,14;UBERON:0000478,3.05e-10,24;UBERON:0003104,3.49e-10,160;UBERON:0009142,3.49e-10,160;UBERON:0004119,4.74e-10,160;UBERON:0000925,4.74e-10,160;UBERON:0006595,4.74e-10,160;UBERON:0011216,1.10e-09,223;UBERON:0001008,1.59e-08,48;UBERON:0006554,3.94e-08,47;UBERON:0003124,7.28e-08,7;UBERON:0007023,8.30e-08,114;UBERON:0000305,2.87e-07,7;UBERON:0002107,4.63e-07,19;UBERON:0006925,4.63e-07,19;UBERON:0008836,4.63e-07,19;UBERON:0001007,4.70e-07,145;UBERON:0001555,4.70e-07,145;UBERON:0007026,4.70e-07,145;UBERON:0003064,4.73e-07,28;UBERON:0003929,7.85e-07,54;UBERON:0001046,8.36e-07,19;UBERON:0000160,8.63e-07,17;UBERON:0005256,9.34e-07,122 | |||
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| |||
|short_description=p11@IGF2 | |||
}} |
Latest revision as of 07:42, 17 September 2015
Short description: | p11@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -200bp_to_AF318382_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P09565 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.56e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.63e-13 | 14 |
membranous layer | 1.63e-13 | 14 |
extraembryonic structure | 3.05e-10 | 24 |
mesenchyme | 3.49e-10 | 160 |
entire embryonic mesenchyme | 3.49e-10 | 160 |
endoderm-derived structure | 4.74e-10 | 160 |
endoderm | 4.74e-10 | 160 |
presumptive endoderm | 4.74e-10 | 160 |
organ system subdivision | 1.10e-09 | 223 |
renal system | 1.59e-08 | 48 |
urinary system structure | 3.94e-08 | 47 |
chorion | 7.28e-08 | 7 |
adult organism | 8.30e-08 | 114 |
amnion | 2.87e-07 | 7 |
liver | 4.63e-07 | 19 |
digestive gland | 4.63e-07 | 19 |
liver bud | 4.63e-07 | 19 |
digestive system | 4.70e-07 | 145 |
digestive tract | 4.70e-07 | 145 |
primitive gut | 4.70e-07 | 145 |
intermediate mesoderm | 4.73e-07 | 28 |
gut epithelium | 7.85e-07 | 54 |
hindgut | 8.36e-07 | 19 |
intestine | 8.63e-07 | 17 |
trunk mesenchyme | 9.34e-07 | 122 |