FFCP PHASE1:Hg19::chr20:57875457..57875496,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:57875457..57875496,+
|short_description=p2@EDN3
|description=CAGE_peak_2_at_EDN3_5end
|association_with_transcript=0bp_to_ENST00000337938_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1908 | |EntrezGene=1908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3178 | |HGNC=3178 | ||
|TSSclassifier=strong | |||
|UniProt=P14138 | |UniProt=P14138 | ||
|association_with_transcript=0bp_to_ENST00000337938_5end | |||
|cluster_id=chr20:57875457..57875496,+ | |||
|description=CAGE_peak_2_at_EDN3_5end | |||
|id=chr20:57875457..57875496,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.51e-12;3!CL:0002536;3.20e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.24e-12,3;CL:0002536,2.17e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004921;4.86e-18;33!UBERON:0000160;3.68e-16;17!UBERON:0005409;4.03e-15;22!UBERON:0000922;5.79e-12;49!UBERON:0001987;1.64e-09;4!UBERON:0000059;7.65e-09;11!UBERON:0001829;9.99e-09;2!UBERON:0004089;2.71e-08;2!UBERON:0003127;3.20e-08;2!UBERON:0000007;6.99e-08;2!UBERON:0001555;8.93e-08;54!UBERON:0002108;9.24e-08;4!UBERON:0001155;3.21e-07;9!UBERON:0001041;9.79e-07;14 | |||
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| ||
|short_description=p2@EDN3 | |||
}} | }} |
Latest revision as of 07:35, 17 September 2015
Short description: | p2@EDN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EDN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000337938_5end |
EntrezGene: | EDN3 |
HGNC: | 3178 |
UniProt: | P14138 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.24e-12 | 3 |
amniotic epithelial cell | 2.17e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 9.95e-19 | 25 |
intestine | 4.04e-16 | 17 |
endoderm-derived structure | 1.31e-12 | 160 |
endoderm | 1.31e-12 | 160 |
presumptive endoderm | 1.31e-12 | 160 |
adult organism | 1.43e-12 | 114 |
digestive system | 5.40e-11 | 145 |
digestive tract | 5.40e-11 | 145 |
primitive gut | 5.40e-11 | 145 |
organ system subdivision | 1.48e-10 | 223 |
subdivision of digestive tract | 6.37e-10 | 118 |
placenta | 1.42e-09 | 4 |
allantois | 1.42e-09 | 4 |
large intestine | 8.32e-09 | 11 |
major salivary gland | 1.02e-08 | 2 |
open tracheal system trachea | 2.81e-08 | 2 |
midface | 2.92e-08 | 2 |
pituitary gland | 8.67e-08 | 2 |
small intestine | 9.46e-08 | 4 |
colon | 3.49e-07 | 9 |