FFCP PHASE1:Hg19::chr16:62070317..62070352,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1006 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1767 | |||
|TSSclassifier=strong | |||
|UniProt=P55286 | |||
|association_with_transcript=-281bp_to_uc002eog.1_5end | |||
|cluster_id=chr16:62070317..62070352,- | |||
|coexpression_cluster_id=C3579 | |||
|description=CAGE_peak_1_at_CDH8_5end | |||
|id=chr16:62070317..62070352,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.87e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.60e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.67e-45!94;UBERON:0001016!1.67e-45!94;UBERON:0005743!5.63e-45!86;UBERON:0001017!1.25e-44!82;UBERON:0002346!2.38e-42!90;UBERON:0001049!2.57e-41!57;UBERON:0005068!2.57e-41!57;UBERON:0006241!2.57e-41!57;UBERON:0007135!2.57e-41!57;UBERON:0003075!9.23e-39!86;UBERON:0007284!9.23e-39!86;UBERON:0002616!1.53e-37!59;UBERON:0000955!8.99e-36!69;UBERON:0006238!8.99e-36!69;UBERON:0002780!1.19e-33!41;UBERON:0001890!1.19e-33!41;UBERON:0006240!1.19e-33!41;UBERON:0003080!2.08e-32!42;UBERON:0000924!6.75e-32!173;UBERON:0006601!6.75e-32!173;UBERON:0004121!4.71e-29!169;UBERON:0001893!5.89e-29!34;UBERON:0003056!7.12e-29!61;UBERON:0002020!8.70e-29!34;UBERON:0003528!8.70e-29!34;UBERON:0002791!4.60e-28!33;UBERON:0001869!1.53e-27!32;UBERON:0007023!2.22e-24!115;UBERON:0000033!3.54e-22!123;UBERON:0000153!7.05e-22!129;UBERON:0007811!7.05e-22!129;UBERON:0000956!3.02e-21!25;UBERON:0000203!3.02e-21!25;UBERON:0002619!3.11e-19!22;UBERON:0001950!1.94e-17!20;UBERON:0000025!2.88e-12!194;UBERON:0000475!1.48e-11!365;UBERON:0000468!2.11e-10!659;UBERON:0003076!6.48e-10!15;UBERON:0003057!6.48e-10!15;UBERON:0000119!1.02e-09!312;UBERON:0000483!1.54e-09!309;UBERON:0002420!2.09e-09!9;UBERON:0007245!2.09e-09!9;UBERON:0010009!2.09e-09!9;UBERON:0010011!2.09e-09!9;UBERON:0000454!2.09e-09!9;UBERON:0002308!5.92e-09!9;UBERON:0000125!5.92e-09!9;UBERON:0004732!1.15e-08!13;UBERON:0004111!1.26e-08!241;UBERON:0000922!7.09e-08!612;UBERON:0004733!7.65e-08!12;UBERON:0002028!7.65e-08!12;UBERON:0007277!7.65e-08!12;UBERON:0009663!1.63e-07!7;UBERON:0000064!3.01e-07!219;UBERON:0000477!6.46e-07!286;UBERON:0000200!8.36e-07!6;UBERON:0000481!9.14e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.53e-34;34!UBERON:0001869;1.38e-33;32!UBERON:0003528;1.66e-33;34!UBERON:0002020;1.66e-33;34!UBERON:0002791;2.31e-33;32!UBERON:0002780;3.78e-31;41!UBERON:0001890;3.78e-31;41!UBERON:0000956;1.32e-28;25!UBERON:0000203;1.32e-28;25!UBERON:0000073;4.60e-28;53!UBERON:0002616;4.60e-28;53!UBERON:0002619;6.96e-26;22!UBERON:0001950;1.94e-23;20!UBERON:0000955;6.36e-21;68!UBERON:0001017;1.38e-20;75!UBERON:0001016;6.48e-18;83!UBERON:0000922;2.83e-12;49!UBERON:0002420;3.23e-12;9!UBERON:0007245;3.23e-12;9!UBERON:0010009;3.23e-12;9!UBERON:0010011;3.23e-12;9!UBERON:0000454;3.23e-12;9!UBERON:0000125;1.34e-11;9!UBERON:0002308;1.34e-11;9!UBERON:0009663;1.18e-09;7!UBERON:0000200;1.03e-08;6!UBERON:0004732;1.29e-08;13!UBERON:0000349;6.13e-08;5!UBERON:0004733;1.43e-07;12!UBERON:0002028;1.43e-07;12!UBERON:0002298;1.68e-07;6!UBERON:0001871;2.16e-07;6!UBERON:0001872;2.71e-07;5!UBERON:0002021;4.07e-07;5!UBERON:0002050;6.51e-07;5!UBERON:0005423;6.51e-07;5!UBERON:0000369;7.73e-07;4!UBERON:0002435;7.73e-07;4!UBERON:0000204;7.73e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.93e-55,81;UBERON:0001016,5.49e-53,89;UBERON:0001049,1.33e-52,56;UBERON:0005068,1.33e-52,56;UBERON:0006241,1.33e-52,56;UBERON:0007135,1.33e-52,56;UBERON:0002346,5.63e-50,86;UBERON:0000073,1.61e-49,53;UBERON:0002616,1.61e-49,53;UBERON:0003075,3.03e-45,82;UBERON:0007284,3.03e-45,82;UBERON:0000955,1.14e-44,68;UBERON:0006238,1.14e-44,68;UBERON:0002780,9.64e-44,41;UBERON:0001890,9.64e-44,41;UBERON:0003080,9.64e-44,41;UBERON:0006240,9.64e-44,41;UBERON:0003056,3.25e-39,61;UBERON:0001893,4.24e-39,34;UBERON:0003528,7.23e-39,34;UBERON:0002020,7.23e-39,34;UBERON:0001869,3.58e-37,32;UBERON:0002791,8.03e-37,32;UBERON:0010371,7.88e-35,104;UBERON:0004121,3.70e-32,171;UBERON:0000924,3.70e-32,171;UBERON:0006601,3.70e-32,171;UBERON:0010314,1.81e-29,132;UBERON:0000956,1.38e-28,25;UBERON:0000203,1.38e-28,25;UBERON:0002619,7.60e-26,22;UBERON:0001950,2.11e-23,20;UBERON:0007023,8.59e-17,114;UBERON:0011216,3.12e-13,223;UBERON:0000025,2.72e-12,192;UBERON:0002420,3.23e-12,9;UBERON:0007245,3.23e-12,9;UBERON:0010009,3.23e-12,9;UBERON:0010011,3.23e-12,9;UBERON:0000454,3.23e-12,9;UBERON:0000125,1.33e-11,9;UBERON:0002308,1.33e-11,9;UBERON:0003076,3.23e-10,15;UBERON:0003057,3.23e-10,15;UBERON:0009663,1.18e-09,7;UBERON:0000200,1.08e-08,6;UBERON:0004732,1.43e-08,13;UBERON:0000349,6.19e-08,5;UBERON:0004111,9.99e-08,240;UBERON:0004733,1.57e-07,12;UBERON:0002028,1.57e-07,12;UBERON:0007277,1.57e-07,12;UBERON:0002298,1.58e-07,6;UBERON:0001871,2.23e-07,6;UBERON:0001872,2.74e-07,5;UBERON:0000483,3.25e-07,306;UBERON:0002021,4.11e-07,5;UBERON:0000119,5.95e-07,309;UBERON:0000369,7.81e-07,4;UBERON:0002435,7.81e-07,4;UBERON:0000204,7.81e-07,4;UBERON:0010082,7.81e-07,4 | |||
|phase1_expression=0,0,0,2.00146596706261,0,0,0,0,0.261185628199839,0,0,0,0,0,0,4.70627602516243,3.61616716814386,2.92124036154949,2.43966399395253,1.23121058076788,1.02000345622126,0.313454721478088,11.7356754723733,9.85495860524766,4.2684497462233,0,0,0,0,0,1.23852898652861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,4.53767122387526,9.53436409089025,15.2832527106039,3.27447688744282,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,1.45650098894541,0,0,1.12135520028461,0,2.22000793575444,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680593098960126,13.2748330409758,11.3185416073841,2.96704661623387,0,0.412210116953756,10.8209026819164,7.44467425326359,0.168776332241266,0,0.504867548488229,1.19664868234989,0,15.620422070731,9.16844093871526,0.169560592310488,0,0,0,8.66013313520127,11.2650303073262,6.85544262930159,9.74413917144482,5.55105871926382,1.45990943630332,1.56449532329816,11.5783368874719,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0,2.23038153388083,0,0,0,0.462942225792648,0,0,2.88662684050547,0.463721619900307,20.3117041027971,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.2933531432838,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80863626235752,16.5591357134056,5.49851451501314,0,0,0,7.42837052023906,6.89171615004683,0,1.44781306667579,0,0,0,0,0,0,16.5161505744601,3.90419561572865,6.95959931499926,3.18280904135263,7.01732626818479,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0.61384789315225,0,0,1.02341449813341,0,0,0,0,0,0,0,0,1.40354529212299,0,0,0,0,0,0.308061348417659,0,0,0.211103257785751,1.13733384070897,0,4.75015015424707,1.54227252690289,0.541892875087706,0.501689773854853,0,0,0,0,0,0.256450125116389,0,1.62689197332152,1.23649213977267,0.457847324091717,0.247528499761764,0.574265537996172,0,1.6068392984416,0.096670718292122,0,0,0.275673144969061,0,0,0.170453254832202,0,0,0.576570202095319,1.53135254993501,0.2023155617111,0,0,0,0.616067160352178,0,0,0,0.429374660225974,0.372158369359667,1.58189712359363,0.190630193923825,0,0,0,0,0,0,0,1.01091240786658,0,0.421258456238981,0,0,1.05650146756755,0,0,0,0,0,0.876901770507525,0,0,8.52223583243357,0.30982349809975,0.563391205064483,0.143411352204052,0,8.91677628703126,0,0,0,0,0,0,0.670302275535787,0,1.03558180854457,0,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0.593929361665277,0,55.6722682749127,31.0879410267233,0,0,0.63337622438398,5.97743964753209,0.552567831062295,0,0,23.6322826485253,80.5592532044081,0,0,0,0.493217028184668,0,0,23.2639859062852,21.4294306753876,41.9188975802508,0,0,0,0,0,0,0,14.871835282546,0,40.7441037474366,36.058335148997,1.52581736317083,0.774054819518572,1.47773809476774,28.7394870271704,0,0,0.230850775511391,0.227884111694002,0,0,0,0.31900115973192,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.8034086695909,18.1638990251359,19.3180606585092,13.5476277291161,3.21031058919516,26.7061468126887,0,0.586993856796269,0,0.789168805698781,0,15.3036380815245,0.695052375913368,1.35291077473043,1.55532287095871,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,2.93774963014692,0.137041924646751,0,42.3549224944828,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,21.6151303935524,7.52979583905962,0,0,12.8814803596864,0,2.7499250881402,0.717873024576814,0,0,0,3.15762320687613,0.360299883542404,0,0,0,0,0,0,34.1948766618,21.5201381656289,2.08979093004525,5.63911690048659,4.15440338029185,0,0,33.5945048318876,3.01891218839339,0.0788057072991982,0.996637174564964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.506183116178,11.6364689533567,0,0,0,4.24451623769098,0,0,0,0,0,0,0,0,0,0,31.0123862988445,34.2893804374516,21.4076491508115,4.58727356552057,10.6491889475378,11.7983165588629,1.798532254171,11.1232563086275,0,0,0,0,0.869526171664951,0,0,0,0,0,0,0.228840068396924,0,0,0,1.43367090447332,0,2.01841843939137,0,0,2.60872530905867,1.05180326298053,10.6625459407263,3.66183659884195,0,0.429642228169954,0.464033759878494,2.3885753321917,26.8018602324313,0,0,47.9502613268874,0,6.21880614987285,28.4483778242081,1.13352962756136,2.31522474323834,0.244736704506468,2.8654214573038,0.617602894321944,0,0,0.771656153083659,0,0,3.79973375904318,0,20.047473242001,0,0,0,0,0,0,7.59952104248734,0,0,0,0,0,6.22077260032973,0.255788742607303,0,17.4565195460045,0.218419276384028,20.7073686543911,94.3832645251472,117.243232989016,10.6142534414916,0.318004350653419,0,0,0,0,41.6205378625058,15.5866233958143,9.57803154342908,26.0497782585759,37.0545393445926,15.4220672995206,31.1647996069473,22.8431072414647,0,0,0,0,30.8919497328405,0,0,0.60168262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| |||
|short_description=p1@CDH8 | |||
}} |
Latest revision as of 07:21, 17 September 2015
Short description: | p1@CDH8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDH8_5end |
Coexpression cluster: | C3579_neuroectodermal_basal_amygdala_putamen_mesodermal_caudate_brain |
Association with transcript: | -281bp_to_uc002eog.1_5end |
EntrezGene: | CDH8 |
HGNC: | 1767 |
UniProt: | P55286 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.87e-08 | 8 |