FFCP PHASE1:Hg19::chr5:176943944..176943976,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:176943944..176943976,- to FFCP PHASE1:Hg19::chr5:176943944..176943976,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51428 | |EntrezGene=51428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18674 | |HGNC=18674 | ||
|TSSclassifier=strong | |||
|UniProt=D6RGI7,D6RD33,Q9UJV9 | |UniProt=D6RGI7,D6RD33,Q9UJV9 | ||
|association_with_transcript=0bp_to_ENST00000503078,ENST00000505081,ENST00000506965,ENST00000509576,ENST00000510171,NM_016222,uc003mho.2,uc003mhp.2,uc003mhq.1_5end | |||
|cluster_id=chr5:176943944..176943976,- | |||
|description=CAGE_peak_1_at_DDX41_5end | |||
|id=chr5:176943944..176943976,- | |||
|ontology_enrichment_celltype=CL:0000066!9.34e-14!254;CL:0000548!1.19e-12!679;CL:0000004!1.19e-12!679;CL:0000255!1.19e-12!679;CL:0000012!2.27e-12!682;CL:1000497!2.41e-07!18;CL:0002518!2.41e-07!18;CL:1000449!2.89e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000497;6.18e-07;17!CL:0002518;6.18e-07;17!CL:1000449;7.13e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.67e-13,253;CL:1000497,5.04e-07,17;CL:0002518,5.04e-07,17;CL:1000449,6.01e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.05e-13!239;DOID:162!6.99e-13!235;DOID:2531!4.94e-10!51;DOID:0060083!4.94e-10!51;DOID:1240!6.63e-09!39;DOID:0050686!7.48e-09!137;DOID:8692!6.70e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.98e-08;31!DOID:1240;2.30e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.05e-13,239;DOID:162,6.99e-13,235;DOID:2531,4.94e-10,51;DOID:0060083,4.94e-10,51;DOID:1240,6.63e-09,39;DOID:0050686,7.48e-09,137;DOID:8692,6.70e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0001851!1.46e-07!16;UBERON:0004211!2.89e-07!16;UBERON:0001285!2.89e-07!16;UBERON:0007684!2.89e-07!16;UBERON:0003220!2.89e-07!16;UBERON:0004208!2.89e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0001851;3.53e-07;15!UBERON:0006554;5.07e-07;30!UBERON:0001008;5.07e-07;30!UBERON:0006555;7.13e-07;15!UBERON:0004819;7.13e-07;15!UBERON:0001285;7.13e-07;15!UBERON:0007684;7.13e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.72e-07,199;UBERON:0001851,3.03e-07,15;UBERON:0004211,6.01e-07,15;UBERON:0009773,6.01e-07,15;UBERON:0001231,6.01e-07,15;UBERON:0001285,6.01e-07,15;UBERON:0007684,6.01e-07,15;UBERON:0004208,6.01e-07,15 | |||
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| ||
|short_description=p1@DDX41 | |||
}} | }} |
Latest revision as of 07:16, 17 September 2015
Short description: | p1@DDX41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DDX41_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000503078, ENST00000505081, ENST00000506965, ENST00000509576, ENST00000510171, NM_016222, uc003mho.2, uc003mhp.2, uc003mhq.1_5end |
EntrezGene: | DDX41 |
HGNC: | 18674 |
UniProt: | D6RGI7D6RD33Q9UJV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.67e-13 | 253 |
kidney cell | 5.04e-07 | 17 |
kidney epithelial cell | 5.04e-07 | 17 |
epithelial cell of nephron | 6.01e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
trunk | 2.72e-07 | 199 |
cortex | 3.03e-07 | 15 |
nephron epithelium | 6.01e-07 | 15 |
renal tubule | 6.01e-07 | 15 |
nephron tubule | 6.01e-07 | 15 |
nephron | 6.01e-07 | 15 |
uriniferous tubule | 6.01e-07 | 15 |
nephrogenic mesenchyme | 6.01e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.05e-13 | 239 |
cancer | 6.99e-13 | 235 |
hematologic cancer | 4.94e-10 | 51 |
immune system cancer | 4.94e-10 | 51 |
leukemia | 6.63e-09 | 39 |
organ system cancer | 7.48e-09 | 137 |
myeloid leukemia | 6.70e-08 | 31 |