FFCP PHASE1:Hg19::chr11:2018875..2018886,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=140bp_to_ENST00000422826_5end | |||
|cluster_id=chr11:2018875..2018886,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_25_at_H19_5end | |||
|id=chr11:2018875..2018886,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;8.53e-17;19!CL:0002577;1.37e-09;3!CL:0002536;5.96e-07;2!CL:0002575;6.30e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.30e-17,19;CL:0002577,1.34e-09,3;CL:0002536,5.96e-07,2;CL:0002575,6.49e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.20e-09;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.90e-14!14;UBERON:0000158!2.90e-14!14;UBERON:0001557!4.15e-13!19;UBERON:0001737!2.31e-12!9;UBERON:0000478!4.54e-11!24;UBERON:0003124!1.44e-10!7;UBERON:0003104!7.50e-09!238;UBERON:0009142!7.50e-09!238;UBERON:0000077!5.89e-08!130;UBERON:0004923!1.06e-07!57;UBERON:0004119!1.07e-07!169;UBERON:0000925!1.07e-07!169;UBERON:0006595!1.07e-07!169;UBERON:0004921!3.46e-07!129;UBERON:0004185!3.46e-07!129;UBERON:0001007!3.84e-07!155;UBERON:0001555!3.84e-07!155;UBERON:0007026!3.84e-07!155;UBERON:0001041!5.14e-07!98;UBERON:0001987!7.00e-07!4;UBERON:0004340!7.00e-07!4;UBERON:0000481!9.43e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.19e-22;9!UBERON:0001557;1.19e-22;9!UBERON:0000478;8.27e-18;24!UBERON:0005631;6.47e-14;10!UBERON:0000158;6.47e-14;10!UBERON:0001987;6.21e-12;4!UBERON:0001134;1.81e-11;16!UBERON:0002036;1.81e-11;16!UBERON:0000305;1.44e-10;7!UBERON:0001723;3.37e-09;3!UBERON:0001033;3.37e-09;3!UBERON:0000072;3.53e-07;37!UBERON:0005090;8.47e-07;2!UBERON:0001630;8.47e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.54e-23,14;UBERON:0000158,1.54e-23,14;UBERON:0001737,1.01e-22,9;UBERON:0001557,5.33e-18,19;UBERON:0000478,7.36e-18,24;UBERON:0003124,8.09e-15,7;UBERON:0001987,5.42e-12,4;UBERON:0004340,5.42e-12,4;UBERON:0000305,1.42e-10,7;UBERON:0000072,3.14e-09,47;UBERON:0001723,3.33e-09,3;UBERON:0001033,3.33e-09,3;UBERON:0010056,3.33e-09,3;UBERON:0004871,3.44e-09,8;UBERON:0004119,9.92e-08,160;UBERON:0000925,9.92e-08,160;UBERON:0006595,9.92e-08,160;UBERON:0000065,1.39e-07,54;UBERON:0001041,3.00e-07,87;UBERON:0005090,8.60e-07,2;UBERON:0001630,8.60e-07,2 | |||
|phase1_expression=1.2717486548939,0.428201047781966,0.281908808191942,1.0007329835313,0,6.97870819280295,0,0,0,0.737201809504527,2.79120467188971,12.66959958355,17.1448535848495,0.123766352960047,0.994192127183747,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45990461090791,0,0,0.087834785693126,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.454072282934794,2.30470369792,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69716365721711,0.10366105501537,0.252320850875628,0,0,0,0,0,0,3.54920400119532,3.03452442140583,3.37415441836875,2.64705534557745,3.7039505495709,2.84724742933316,4.44943316928543,3.92442930250692,3.46272441251751,1.4763109092493,0,2.4694440679884,4.41026134156626,0,0,0.590789906681404,0,0,0,0,0,0,1.01847289674383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,55.8900253553186,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.868687840005475,1.64381058040307,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0,0,9.79005787313703,24.0200396667599,0,0,0,11.8219752864041,31.6227335069944,11.7932214398575,0.992431231275107,0,1.96462066103151,0.128139149255701,0,0.321707842287215,8.90508398669946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.170093705276516,0,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0.650060246036521,0,0.290012154876366,1.07834031980251,0.921022048356777,1.10269257987624,0,1.0151168573996,0.767039646744908,3.38321735457602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,2.1396949401696,0,0,0.179872457583315,0,0,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.196498082026242,0,0,0,0,0,1.74967360122491,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,24.1131929585067,9.79983446747707,71.8756042912203,0,0,0,0,0,0.398495976502139,0,1.76352923497993,0,0,0,0,0,0,0.986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,2.12748913591143,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,8.43721857451858,4.67183699264635,23.2870846604301,0.915975934018623,66.6293470023293,0,0,0,0.451191321234361,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,20.8670188297685,0,0,0,0,0.394584402849391,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0.19351266257817,0,0,0.193978032976839,0.0882561266915003,2.25980740780532,0,0,0,0.391102765469606,0,0,39.7621123068439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0,0.199679000498991,0.429226048136571,0,0.873385142327441,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.157611414598396,0.786818822024972,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.439656701034247,13.2506888912221,0,0,0,0,0,0.471612915298998,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2007774105683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94084660514027,0,1.31051565830417,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.825788063434183,0.550285795565037,15.2493879318446,0,0,0,0.225630985047772,0,0,13.8810548075154,0,0.443568258651136,0,0,0,0,0,0,1.48863353516788,0,0.511049710558381,0,0,0,0,3.72549954683083,0,0.514464028312255,0,0,0,0,0.078493092850514,0,1.12108865325516,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,2.06196181689645,0,0,0,0,0,4.53200186031526,1.23195368227496,10.4383298820438,0.971421986118279,0,0,0,0,0,0,0,1.5299169235277,0,0.735444965261716,0.471353094203252,0,0,0.4226557275834,0,0,0.709036767709349,0,0.357107877211315,0,0,0.730336388246517,0,0,0.157771562193185,0,0,5.290268405154,0,0,3.46101249699031,0,0.109265571963696,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,1.27940389140589,2.85677317756488,0,0.124149428591716,0,0,1.21270313374932,2.39488422686657,14.0315653444965,0.471464371102113,0.0717222053926763,4.65724499164419,0,0,0,0,4.69281884806909,0.122241444182866,2.03448089157869,0,0.402547587182052,0 | |phase1_expression=1.2717486548939,0.428201047781966,0.281908808191942,1.0007329835313,0,6.97870819280295,0,0,0,0.737201809504527,2.79120467188971,12.66959958355,17.1448535848495,0.123766352960047,0.994192127183747,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45990461090791,0,0,0.087834785693126,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.454072282934794,2.30470369792,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69716365721711,0.10366105501537,0.252320850875628,0,0,0,0,0,0,3.54920400119532,3.03452442140583,3.37415441836875,2.64705534557745,3.7039505495709,2.84724742933316,4.44943316928543,3.92442930250692,3.46272441251751,1.4763109092493,0,2.4694440679884,4.41026134156626,0,0,0.590789906681404,0,0,0,0,0,0,1.01847289674383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,55.8900253553186,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.868687840005475,1.64381058040307,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0,0,9.79005787313703,24.0200396667599,0,0,0,11.8219752864041,31.6227335069944,11.7932214398575,0.992431231275107,0,1.96462066103151,0.128139149255701,0,0.321707842287215,8.90508398669946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.170093705276516,0,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0.650060246036521,0,0.290012154876366,1.07834031980251,0.921022048356777,1.10269257987624,0,1.0151168573996,0.767039646744908,3.38321735457602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,2.1396949401696,0,0,0.179872457583315,0,0,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.196498082026242,0,0,0,0,0,1.74967360122491,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,24.1131929585067,9.79983446747707,71.8756042912203,0,0,0,0,0,0.398495976502139,0,1.76352923497993,0,0,0,0,0,0,0.986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,2.12748913591143,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,8.43721857451858,4.67183699264635,23.2870846604301,0.915975934018623,66.6293470023293,0,0,0,0.451191321234361,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,20.8670188297685,0,0,0,0,0.394584402849391,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0.19351266257817,0,0,0.193978032976839,0.0882561266915003,2.25980740780532,0,0,0,0.391102765469606,0,0,39.7621123068439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0,0.199679000498991,0.429226048136571,0,0.873385142327441,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.157611414598396,0.786818822024972,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.439656701034247,13.2506888912221,0,0,0,0,0,0.471612915298998,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2007774105683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94084660514027,0,1.31051565830417,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.825788063434183,0.550285795565037,15.2493879318446,0,0,0,0.225630985047772,0,0,13.8810548075154,0,0.443568258651136,0,0,0,0,0,0,1.48863353516788,0,0.511049710558381,0,0,0,0,3.72549954683083,0,0.514464028312255,0,0,0,0,0.078493092850514,0,1.12108865325516,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,2.06196181689645,0,0,0,0,0,4.53200186031526,1.23195368227496,10.4383298820438,0.971421986118279,0,0,0,0,0,0,0,1.5299169235277,0,0.735444965261716,0.471353094203252,0,0,0.4226557275834,0,0,0.709036767709349,0,0.357107877211315,0,0,0.730336388246517,0,0,0.157771562193185,0,0,5.290268405154,0,0,3.46101249699031,0,0.109265571963696,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,1.27940389140589,2.85677317756488,0,0.124149428591716,0,0,1.21270313374932,2.39488422686657,14.0315653444965,0.471464371102113,0.0717222053926763,4.65724499164419,0,0,0,0,4.69281884806909,0.122241444182866,2.03448089157869,0,0.402547587182052,0 | ||
|short_description=p25@H19 | |||
}} | }} |
Latest revision as of 06:56, 17 September 2015
Short description: | p25@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 140bp_to_ENST00000422826_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.30e-17 | 19 |
placental epithelial cell | 1.34e-09 | 3 |
amniotic epithelial cell | 5.96e-07 | 2 |
central nervous system pericyte | 6.49e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.54e-23 | 14 |
membranous layer | 1.54e-23 | 14 |
larynx | 1.01e-22 | 9 |
upper respiratory tract | 5.33e-18 | 19 |
extraembryonic structure | 7.36e-18 | 24 |
chorion | 8.09e-15 | 7 |
placenta | 5.42e-12 | 4 |
allantois | 5.42e-12 | 4 |
amnion | 1.42e-10 | 7 |
segment of respiratory tract | 3.14e-09 | 47 |
tongue | 3.33e-09 | 3 |
gustatory system | 3.33e-09 | 3 |
future tongue | 3.33e-09 | 3 |
somatic layer of lateral plate mesoderm | 3.44e-09 | 8 |
endoderm-derived structure | 9.92e-08 | 160 |
endoderm | 9.92e-08 | 160 |
presumptive endoderm | 9.92e-08 | 160 |
respiratory tract | 1.39e-07 | 54 |
foregut | 3.00e-07 | 87 |
muscle structure | 8.60e-07 | 2 |
muscle organ | 8.60e-07 | 2 |