FFCP PHASE1:Hg19::chr16:6069203..6069215,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:6069203..6069215,+ to FFCP PHASE1:Hg19::chr16:6069203..6069215,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54715 | |EntrezGene=54715 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18222 | |HGNC=18222 | ||
|TSSclassifier=strong | |||
|UniProt=Q59HD3,Q9NWB1 | |UniProt=Q59HD3,Q9NWB1 | ||
|association_with_transcript=71bp_to_ENST00000550418,ENST00000553186,NM_001142333,NM_018723,uc002cyr.1,uc002cys.2,uc002cyt.2,uc010buf.1_5end | |||
|cluster_id=chr16:6069203..6069215,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_20_at_RBFOX1_5end | |||
|id=chr16:6069203..6069215,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.95e-07!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.84e-14;82!UBERON:0006215;1.77e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;4.05e-104;20!UBERON:0002619;9.68e-95;22!UBERON:0000956;2.24e-83;25!UBERON:0000203;2.24e-83;25!UBERON:0001869;1.30e-71;32!UBERON:0001893;1.07e-65;34!UBERON:0002791;8.43e-63;32!UBERON:0003528;2.39e-59;34!UBERON:0002020;2.39e-59;34!UBERON:0002780;3.57e-44;41!UBERON:0001890;3.57e-44;41!UBERON:0000200;3.94e-37;6!UBERON:0000073;7.18e-34;53!UBERON:0002616;7.18e-34;53!UBERON:0001871;1.55e-32;6!UBERON:0002021;1.08e-30;5!UBERON:0001017;4.39e-29;75!UBERON:0000955;3.23e-28;68!UBERON:0001016;1.84e-22;83!UBERON:0001872;2.02e-20;5!UBERON:0001870;1.82e-19;3!UBERON:0001876;5.16e-14;2!UBERON:0002702;8.64e-14;2!UBERON:0002771;1.85e-13;2!UBERON:0000349;4.93e-12;5!UBERON:0011216;1.26e-10;132!UBERON:0007023;3.21e-08;114!UBERON:0002022;5.76e-08;1!UBERON:0002581;9.74e-08;1!UBERON:0002902;2.10e-07;1!UBERON:0001882;2.10e-07;1!UBERON:0003112;2.10e-07;1!UBERON:0011158;2.10e-07;1!UBERON:0009899;2.10e-07;1!UBERON:0007190;2.10e-07;1!UBERON:0003128;2.10e-07;1!UBERON:0005403;2.10e-07;1!UBERON:0001703;2.10e-07;1!UBERON:0002241;2.10e-07;1!UBERON:0002420;6.91e-07;9!UBERON:0007245;6.91e-07;9!UBERON:0010009;6.91e-07;9!UBERON:0010011;6.91e-07;9!UBERON:0000454;6.91e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,6.90e-104,20;UBERON:0002619,1.57e-94,22;UBERON:0000956,3.44e-83,25;UBERON:0000203,3.44e-83,25;UBERON:0001869,2.75e-79,32;UBERON:0001893,1.61e-74,34;UBERON:0002791,7.65e-72,32;UBERON:0002780,1.34e-67,41;UBERON:0001890,1.34e-67,41;UBERON:0003080,1.34e-67,41;UBERON:0006240,1.34e-67,41;UBERON:0003528,1.64e-67,34;UBERON:0002020,1.64e-67,34;UBERON:0001017,7.22e-63,81;UBERON:0000073,4.76e-62,53;UBERON:0002616,4.76e-62,53;UBERON:0000955,2.63e-60,68;UBERON:0006238,2.63e-60,68;UBERON:0001049,1.53e-58,56;UBERON:0005068,1.53e-58,56;UBERON:0006241,1.53e-58,56;UBERON:0007135,1.53e-58,56;UBERON:0001016,3.19e-56,89;UBERON:0003056,2.13e-44,61;UBERON:0003075,9.36e-39,82;UBERON:0007284,9.36e-39,82;UBERON:0000200,8.42e-37,6;UBERON:0002346,9.28e-37,86;UBERON:0001871,1.60e-32,6;UBERON:0002021,1.84e-30,5;UBERON:0010371,1.18e-29,104;UBERON:0004121,2.76e-27,171;UBERON:0000924,2.76e-27,171;UBERON:0006601,2.76e-27,171;UBERON:0007023,1.17e-26,114;UBERON:0010314,1.38e-24,132;UBERON:0011216,4.15e-23,223;UBERON:0001872,2.35e-20,5;UBERON:0001870,1.37e-19,3;UBERON:0001876,3.50e-14,2;UBERON:0000025,5.71e-14,192;UBERON:0002702,9.83e-14,2;UBERON:0002771,2.54e-13,2;UBERON:0000349,3.72e-12,5;UBERON:0004111,3.10e-10,240;UBERON:0002022,6.37e-08,1;UBERON:0002581,1.30e-07,1;UBERON:0002902,1.48e-07,1;UBERON:0009899,1.48e-07,1;UBERON:0003112,1.69e-07,1;UBERON:0011158,1.69e-07,1;UBERON:0003128,1.69e-07,1;UBERON:0001703,1.69e-07,1;UBERON:0002241,1.69e-07,1;UBERON:0004761,1.69e-07,1;UBERON:0009617,1.69e-07,1;UBERON:0001882,1.91e-07,1;UBERON:0005403,1.91e-07,1;UBERON:0007190,2.17e-07,1;UBERON:0000483,5.20e-07,306;UBERON:0002420,5.94e-07,9;UBERON:0007245,5.94e-07,9;UBERON:0010009,5.94e-07,9;UBERON:0010011,5.94e-07,9;UBERON:0000454,5.94e-07,9;UBERON:0000119,6.76e-07,309 | |||
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| ||
|short_description=p20@RBFOX1 | |||
}} | }} |
Latest revision as of 06:52, 17 September 2015
Short description: | p20@RBFOX1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_RBFOX1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 71bp_to_ENST00000550418, ENST00000553186, NM_001142333, NM_018723, uc002cyr.1, uc002cys.2, uc002cyt.2, uc010buf.1_5end |
EntrezGene: | RBFOX1 |
HGNC: | 18222 |
UniProt: | Q59HD3Q9NWB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data