FFCP PHASE1:Hg19::chr11:2018058..2018067,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHT2 | |UniProt=Q9UHT2 | ||
|association_with_transcript=-417bp_to_AF118081_5end | |association_with_transcript=-417bp_to_AF118081_5end | ||
|cluster_id=chr11:2018058..2018067,+ | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_14_at_AF118081_5end | |description=CAGE_peak_14_at_AF118081_5end | ||
|id=chr11:2018058..2018067,+ | |id=chr11:2018058..2018067,+ | ||
|ontology_enrichment_celltype=CL:0000349!2.11e-10!3;CL:0002577!2.11e-10!3;CL:0002575!2.78e-07!2;CL:0002536!2.87e-07!2;CL:0000188!3.50e-07!9 | |ontology_enrichment_celltype=CL:0000349!2.11e-10!3;CL:0002577!2.11e-10!3;CL:0002575!2.78e-07!2;CL:0002536!2.87e-07!2;CL:0000188!3.50e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.30e-33;19!CL:0002577;1.09e-18;3!CL:0002581;2.10e-14;1!CL:0002537;1.15e-11;5!CL:0002575;5.19e-08;2!CL:0002536;7.52e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.37e-33,19;CL:0002577,8.69e-19,3;CL:0002581,1.61e-14,1;CL:0002537,1.15e-11,5;CL:0002575,5.37e-08,2;CL:0002536,8.04e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!6.78e-26!9;UBERON:0005631!5.73e-25!14;UBERON:0000158!5.73e-25!14;UBERON:0001557!2.53e-20!19;UBERON:0000478!3.04e-16!24;UBERON:0003124!8.61e-16!7;UBERON:0001987!5.00e-13!4;UBERON:0004340!5.00e-13!4;UBERON:0000305!4.56e-11!7;UBERON:0001723!1.07e-09!3;UBERON:0001033!1.07e-09!3;UBERON:0010056!1.07e-09!3;UBERON:0004871!1.25e-09!8;UBERON:0000072!4.62e-08!46;UBERON:0005406!2.25e-07!2;UBERON:0004923!3.82e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.57e-26;24!UBERON:0005631;2.17e-21;10!UBERON:0000158;2.17e-21;10!UBERON:0000305;1.17e-17;7!UBERON:0002426;1.00e-14;1!UBERON:0003831;1.00e-14;1!UBERON:0003898;1.00e-14;1!UBERON:0004830;1.00e-14;1!UBERON:0003830;1.00e-14;1!UBERON:0005175;1.00e-14;1!UBERON:0001774;1.00e-14;1!UBERON:0001103;1.00e-14;1!UBERON:0001987;2.85e-14;4!UBERON:0005090;5.19e-08;2!UBERON:0001630;5.19e-08;2!UBERON:0005406;7.52e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.35e-33,14;UBERON:0000158,1.35e-33,14;UBERON:0000478,1.63e-26,24;UBERON:0000305,1.24e-17,7;UBERON:0003124,1.31e-17,7;UBERON:0004871,1.64e-15,8;UBERON:0002426,9.36e-15,1;UBERON:0003831,9.36e-15,1;UBERON:0003898,9.36e-15,1;UBERON:0004830,9.36e-15,1;UBERON:0003830,9.36e-15,1;UBERON:0005175,9.36e-15,1;UBERON:0001774,9.36e-15,1;UBERON:0001103,9.36e-15,1;UBERON:0010084,9.36e-15,1;UBERON:0001987,2.41e-14,4;UBERON:0004340,2.41e-14,4;UBERON:0005090,5.02e-08,2;UBERON:0001630,5.02e-08,2;UBERON:0005406,6.58e-08,2;UBERON:0004923,6.54e-07,66 | |||
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| ||
|short_description=p14@AF118081 | |short_description=p14@AF118081 | ||
}} | }} |
Latest revision as of 06:38, 17 September 2015
Short description: | p14@AF118081 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_AF118081_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -417bp_to_AF118081_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.37e-33 | 19 |
placental epithelial cell | 8.69e-19 | 3 |
perirenal preadipocyte | 1.61e-14 | 1 |
amnion mesenchymal stem cell | 1.15e-11 | 5 |
central nervous system pericyte | 5.37e-08 | 2 |
amniotic epithelial cell | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.35e-33 | 14 |
membranous layer | 1.35e-33 | 14 |
extraembryonic structure | 1.63e-26 | 24 |
amnion | 1.24e-17 | 7 |
chorion | 1.31e-17 | 7 |
somatic layer of lateral plate mesoderm | 1.64e-15 | 8 |
chest muscle | 9.36e-15 | 1 |
respiratory system muscle | 9.36e-15 | 1 |
skeletal muscle of trunk | 9.36e-15 | 1 |
respiratory system skeletal muscle | 9.36e-15 | 1 |
thoracic segment muscle | 9.36e-15 | 1 |
chest organ | 9.36e-15 | 1 |
muscle of trunk | 9.36e-15 | 1 |
diaphragm | 9.36e-15 | 1 |
future diaphragm | 9.36e-15 | 1 |
placenta | 2.41e-14 | 4 |
allantois | 2.41e-14 | 4 |
muscle structure | 5.02e-08 | 2 |
muscle organ | 5.02e-08 | 2 |
perirenal fat | 6.58e-08 | 2 |
organ component layer | 6.54e-07 | 66 |