FFCP PHASE1:Hg19::chr11:2017467..2017478,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-46bp_to_ENST00000442037_5end | |association_with_transcript=-46bp_to_ENST00000442037_5end | ||
|cluster_id=chr11:2017467..2017478,- | |||
|description=CAGE_peak_33_at_H19_5end | |description=CAGE_peak_33_at_H19_5end | ||
|id=chr11:2017467..2017478,- | |id=chr11:2017467..2017478,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.98e-11;19!CL:0002536;3.75e-08;2!CL:0002575;3.75e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.75e-11,19;CL:0002536,5.59e-08,2;CL:0002575,6.23e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.17e-16;29!UBERON:0005062;8.35e-09;4!UBERON:0007284;8.35e-09;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;5.45e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.37e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001557!5.42e-19!19;UBERON:0001737!4.14e-17!9;UBERON:0005631!1.05e-15!14;UBERON:0000158!1.05e-15!14;UBERON:0000478!2.64e-13!24;UBERON:0003104!4.40e-12!238;UBERON:0009142!4.40e-12!238;UBERON:0003124!2.43e-11!7;UBERON:0000077!2.99e-11!130;UBERON:0004119!1.60e-10!169;UBERON:0000925!1.60e-10!169;UBERON:0006595!1.60e-10!169;UBERON:0004921!2.44e-10!129;UBERON:0004185!2.44e-10!129;UBERON:0007023!1.36e-09!115;UBERON:0004923!1.79e-09!57;UBERON:0000065!2.64e-09!53;UBERON:0001041!4.06e-09!98;UBERON:0001007!4.28e-09!155;UBERON:0001555!4.28e-09!155;UBERON:0007026!4.28e-09!155;UBERON:0000072!4.77e-09!46;UBERON:0000481!1.67e-08!347;UBERON:0000926!2.58e-07!448;UBERON:0004120!2.58e-07!448;UBERON:0006603!2.58e-07!448;UBERON:0001987!2.89e-07!4;UBERON:0004340!2.89e-07!4;UBERON:0008947!3.16e-07!38;UBERON:0003258!3.16e-07!38;UBERON:0003103!3.38e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.20e-33;9!UBERON:0001557;1.20e-33;9!UBERON:0000478;1.97e-13;24!UBERON:0004151;5.28e-12;3!UBERON:0003978;1.35e-11;3!UBERON:0000946;1.35e-11;3!UBERON:0007100;2.27e-10;25!UBERON:0000065;3.11e-09;44!UBERON:0005631;7.67e-09;10!UBERON:0000158;7.67e-09;10!UBERON:0000305;1.54e-08;7!UBERON:0002081;1.67e-08;2!UBERON:0002133;1.67e-08;2!UBERON:0000072;6.27e-08;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.19e-33,9;UBERON:0001557,2.45e-26,19;UBERON:0000478,1.96e-13,24;UBERON:0000065,3.71e-12,54;UBERON:0004151,4.83e-12,3;UBERON:0003978,6.75e-12,3;UBERON:0009751,6.75e-12,3;UBERON:0000946,6.75e-12,3;UBERON:0002523,6.75e-12,3;UBERON:0005983,6.75e-12,3;UBERON:0002165,6.75e-12,3;UBERON:0002062,6.75e-12,3;UBERON:0007280,6.75e-12,3;UBERON:0001041,6.76e-12,87;UBERON:0008947,7.12e-12,38;UBERON:0003258,7.12e-12,38;UBERON:0005631,9.21e-12,14;UBERON:0000158,9.21e-12,14;UBERON:0000072,1.09e-10,47;UBERON:0007100,1.29e-09,27;UBERON:0004921,2.34e-09,118;UBERON:0002133,1.15e-08,2;UBERON:0003103,1.15e-08,68;UBERON:0002081,1.67e-08,2;UBERON:0010227,1.67e-08,2;UBERON:0000305,2.05e-08,7;UBERON:0001004,6.00e-08,74;UBERON:0004871,2.29e-07,8;UBERON:0004119,3.71e-07,160;UBERON:0000925,3.71e-07,160;UBERON:0006595,3.71e-07,160;UBERON:0007023,5.85e-07,114 | |||
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| ||
|short_description=p33@H19 | |short_description=p33@H19 | ||
}} | }} |
Latest revision as of 06:32, 17 September 2015
Short description: | p33@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_H19_5end |
Coexpression cluster: | NA |
Association with transcript: | -46bp_to_ENST00000442037_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.75e-11 | 19 |
amniotic epithelial cell | 5.59e-08 | 2 |
central nervous system pericyte | 6.23e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.19e-33 | 9 |
upper respiratory tract | 2.45e-26 | 19 |
extraembryonic structure | 1.96e-13 | 24 |
respiratory tract | 3.71e-12 | 54 |
cardiac chamber | 4.83e-12 | 3 |
valve | 6.75e-12 | 3 |
cardiac mesenchyme | 6.75e-12 | 3 |
cardial valve | 6.75e-12 | 3 |
tunica intima | 6.75e-12 | 3 |
heart layer | 6.75e-12 | 3 |
endocardium | 6.75e-12 | 3 |
endocardial cushion | 6.75e-12 | 3 |
presumptive endocardium | 6.75e-12 | 3 |
foregut | 6.76e-12 | 87 |
respiratory primordium | 7.12e-12 | 38 |
endoderm of foregut | 7.12e-12 | 38 |
extraembryonic membrane | 9.21e-12 | 14 |
membranous layer | 9.21e-12 | 14 |
segment of respiratory tract | 1.09e-10 | 47 |
primary circulatory organ | 1.29e-09 | 27 |
subdivision of digestive tract | 2.34e-09 | 118 |
atrioventricular valve | 1.15e-08 | 2 |
compound organ | 1.15e-08 | 68 |
cardiac atrium | 1.67e-08 | 2 |
future cardiac atrium | 1.67e-08 | 2 |
amnion | 2.05e-08 | 7 |
respiratory system | 6.00e-08 | 74 |
somatic layer of lateral plate mesoderm | 2.29e-07 | 8 |
endoderm-derived structure | 3.71e-07 | 160 |
endoderm | 3.71e-07 | 160 |
presumptive endoderm | 3.71e-07 | 160 |
adult organism | 5.85e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.37e-09 | 2 |