FFCP PHASE1:Hg19::chr17:7164410..7164457,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:7164410..7164457,- to FFCP PHASE1:Hg19::chr17:7164410..7164457,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1366 | |EntrezGene=1366 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2049 | |HGNC=2049 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-261bp_to_AK225418_5end | |||
|cluster_id=chr17:7164410..7164457,- | |||
|description=CAGE_peak_3_at_CLDN7_5end | |||
|id=chr17:7164410..7164457,- | |||
|ontology_enrichment_celltype=CL:0000066!3.48e-35!254;CL:0000223!6.96e-18!59;CL:0002076!2.50e-16!43;CL:0002368!1.81e-09!13;CL:0002251!1.18e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.62e-16;42!CL:0002368;2.05e-13;13!CL:1000507;1.89e-08;10!CL:1000494;1.89e-08;10!CL:0002202;2.40e-08;9!CL:0002632;2.40e-08;9!CL:1000449;4.35e-08;15!CL:0002251;5.25e-08;20!CL:1000497;7.34e-07;17!CL:0002518;7.34e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.01e-35,253;CL:0000223,5.19e-22,58;CL:0002076,1.80e-20,42;CL:0002368,2.17e-13,13;CL:1000507,1.55e-08,10;CL:1000494,1.55e-08,10;CL:0002202,2.34e-08,9;CL:0002632,2.34e-08,9;CL:1000449,3.45e-08,15;CL:0002251,6.16e-08,20;CL:1000497,6.03e-07,17;CL:0002518,6.03e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.64e-13;29!CL:0000223;5.84e-13;58!UBERON:0006595;9.80e-10;86 | |||
|ontology_enrichment_disease=DOID:305!2.14e-21!106;DOID:0050687!2.19e-14!143 | |||
|ontology_enrichment_disease_v019=DOID:299;1.98e-08;25!DOID:305;4.22e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.38e-20,106;DOID:0050687,2.32e-14,143;DOID:299,1.62e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.26e-30!169;UBERON:0000925!1.26e-30!169;UBERON:0006595!1.26e-30!169;UBERON:0001007!6.79e-25!155;UBERON:0001555!6.79e-25!155;UBERON:0007026!6.79e-25!155;UBERON:0004921!3.47e-23!129;UBERON:0004185!3.47e-23!129;UBERON:0001004!1.11e-19!72;UBERON:0000077!1.20e-18!130;UBERON:0001041!1.89e-17!98;UBERON:0000466!1.13e-16!126;UBERON:0000065!2.40e-16!53;UBERON:0005911!1.60e-14!82;UBERON:0008947!4.33e-14!38;UBERON:0003258!4.33e-14!38;UBERON:0000464!1.27e-13!104;UBERON:0005177!7.18e-13!107;UBERON:0000072!1.41e-12!46;UBERON:0001048!3.23e-10!168;UBERON:0003104!4.43e-10!238;UBERON:0009142!4.43e-10!238;UBERON:0009569!7.15e-10!113;UBERON:0006554!5.29e-09!44;UBERON:0001737!6.02e-09!9;UBERON:0005178!6.28e-09!34;UBERON:0002224!6.28e-09!34;UBERON:0001008!1.41e-08!45;UBERON:0005181!1.99e-08!35;UBERON:0000481!5.10e-08!347;UBERON:0003929!6.48e-08!54;UBERON:0000058!9.39e-08!26;UBERON:0000161!1.54e-07!35;UBERON:0007196!3.96e-07!14;UBERON:0001558!3.96e-07!14;UBERON:0000063!4.39e-07!97;UBERON:0005153!4.55e-07!37;UBERON:0001557!5.22e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;7.02e-16;44!UBERON:0000072;5.56e-15;37!UBERON:0001737;4.74e-14;9!UBERON:0001557;4.74e-14;9!UBERON:0001004;2.32e-12;65!UBERON:0004921;3.83e-09;33!UBERON:0006554;7.84e-09;30!UBERON:0001008;7.84e-09;30!UBERON:0004211;1.89e-08;10!UBERON:0009773;1.89e-08;10!UBERON:0001231;1.89e-08;10!UBERON:0004810;1.89e-08;10!UBERON:0004807;2.45e-08;22!UBERON:0005178;3.23e-08;34!UBERON:0002224;3.23e-08;34!UBERON:0006555;4.35e-08;15!UBERON:0004819;4.35e-08;15!UBERON:0001285;4.35e-08;15!UBERON:0007684;4.35e-08;15!UBERON:0005911;4.97e-08;36!UBERON:0005181;1.14e-07;35!UBERON:0007196;6.50e-07;15!UBERON:0001558;6.50e-07;15!UBERON:0000486;8.40e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.50e-34,160;UBERON:0000925,3.50e-34,160;UBERON:0006595,3.50e-34,160;UBERON:0001007,2.87e-28,145;UBERON:0001555,2.87e-28,145;UBERON:0007026,2.87e-28,145;UBERON:0004921,3.34e-27,118;UBERON:0001041,1.03e-22,87;UBERON:0001004,2.73e-21,74;UBERON:0008947,1.63e-18,38;UBERON:0003258,1.63e-18,38;UBERON:0000065,2.97e-18,54;UBERON:0005911,8.90e-15,82;UBERON:0005177,1.01e-14,101;UBERON:0000072,1.35e-14,47;UBERON:0001737,4.38e-14,9;UBERON:0009569,4.97e-12,112;UBERON:0011216,7.65e-10,223;UBERON:0005178,3.56e-09,34;UBERON:0002224,3.56e-09,34;UBERON:0006555,4.06e-09,16;UBERON:0004819,4.06e-09,16;UBERON:0006554,5.26e-09,47;UBERON:0005181,8.92e-09,35;UBERON:0001008,1.07e-08,48;UBERON:0004810,1.55e-08,10;UBERON:0004211,3.45e-08,15;UBERON:0009773,3.45e-08,15;UBERON:0001231,3.45e-08,15;UBERON:0001285,3.45e-08,15;UBERON:0007684,3.45e-08,15;UBERON:0004208,3.45e-08,15;UBERON:0001557,8.70e-08,19;UBERON:0005172,8.81e-08,54;UBERON:0005173,8.81e-08,54;UBERON:0001048,1.02e-07,160;UBERON:0003929,2.22e-07,54;UBERON:0007196,5.94e-07,15;UBERON:0001558,5.94e-07,15;UBERON:0002113,9.03e-07,26;UBERON:0003918,9.03e-07,26;UBERON:0011143,9.03e-07,26;UBERON:0005095,9.03e-07,26;UBERON:0007687,9.03e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,8.84642171405432,28.6098478868695,0.655324116390517,1.31883489114227,0.123766352960047,0.662794751455832,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.154816123316076,5.51652734687356,0.90361775633475,8.13458822366933,0,0,0,0,0.200544447470142,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0.34362744548263,0,0.95569624297229,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0.175669571386252,1.89919659471683,8.37879163072847,4.07862887062872,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,5.23312862571041,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.468642863667593,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0,0,0,0.184099797284599,0,0,0.10075209822764,0.169560592310488,8.50347753918506,3.54569956768085,5.44928731239107,0.121973706129595,0.530119073285941,0.69716365721711,1.24393266018445,1.00928340350251,1.09493207722749,0,0,0,0.464367928031979,0,8.87301000298829,7.92348043367078,8.19437501603839,8.82351781859152,8.71517776369625,6.16903609688851,6.87639671616838,8.24130153526453,6.92544882503503,0.738155454624648,0,0.4115740113314,0,13.9430538304014,31.450470933684,12.4065880403095,0,2.58275720940538,0.171567810298526,1.09750285408626,7.86812272803337,0.703702806881416,2.68506490959736,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0,1.58040879591855,1.71697232418975,0,0,0,4.68669169933885,3.86358894857377,1.55952606966625,1.52249488594842,0.290633938513962,0,0,0,0.207328115540772,0,0.25248486685276,0,0.381988425558278,0,1.71072446022705,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0,0,0,0.909382714338778,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,1.0877350463246,4.0101294060657,4.32780647998713,0,0,0.262248829918848,4.96319574198153,3.08061348417659,5.49044838423799,4.38417673959782,2.21658420675039,0,0,0,1.54227252690289,0.812839312631559,0.501689773854853,6.37190682612596,9.14183609821597,1.79099803777743,0,0,0,0,0,7.83111688522689,0,0,1.14853107599234,0,0,0.096670718292122,0,0,0,0.107420244868274,0.290033387828457,0.0852266274161009,0,12.2310837367124,8.84074309879488,2.04180339991335,6.57525575561074,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,0,0,0.379473173765715,0,10.0070997234533,7.37332503089366,13.0669181833587,7.71979166369589,4.73555909938353,8.42357378338128,4.87773168890343,2.75668080248351,0,0,0,0.238231775457789,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6670108032685,0,0,0,0,1.19372242368845,2.37571744666111,0.614321404198464,0,0,0,0,3.58913193817589,0.398495976502139,0.828851746593443,9.32151167060821,0,0,0.311039587661807,2.69605053441981,15.3958210221024,0.511572370226872,0.0986434056369336,0,0,2.90799823828566,0,0,4.94812746061943,0.262379999988587,0.724999575434793,0.227586896570999,2.79679015322043,2.12748913591143,0,0,0.173624994933292,0,0,0,0,0,0,0,5.29810228258692,0.307801034015188,0,1.1528195219403,0.269272933229316,1.08647371922008,1.27600463892768,0.549585560411174,0,0,0,0.166211681900156,0,0,0,0,0,0,0.326465616318295,0.424059214301822,0,1.99052386215701,4.77670848318032,9.16545217400438,0,0,0,0.067401132980677,0,0,0,1.9566461893209,0,0.789168805698781,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,1.70765727617876,0,4.5125531967134,1.17590876897253,1.30588809870604,2.62090002363045,1.54787429224455,0.19351266257817,0.877071805034227,0.246346371159628,1.16386819786103,0,0.451961481561065,0,0,0,8.79981222306614,0.64127056201227,2.13452994739353,0,6.91634002339709,0,1.20116498503375,1.1524383839052,0,12.727477869307,0,0,0,0.866851769704557,0,0,0,0,0,0,0,0,1.59743200399193,0,0,0.0671834724867263,0,4.65983798109815,0,0,0,3.74024429756045,0,0,0,1.28602518772015,1.10031549277787,0.83088067605837,0.2249738915515,0,0,0,8.27459926641581,2.8325477592899,0,0,5.37362552494447,0,0.662091970365432,0,0,0,0,0,0,0,1.01980882368113,28.8707900345822,1.32506888912221,0,0,0,5.63852017853338,1.49502377594773,0.314408610199332,0.828478110694391,0.496166021811951,0,0,4.46838880439127,0,0.5013797880454,0.919036730290385,1.31149052283922,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0,0.343395705182793,0,0,0,0.214441591374926,0,0,0.926089897295336,0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| ||
|short_description=p3@CLDN7 | |||
}} | }} |
Latest revision as of 06:24, 17 September 2015
Short description: | p3@CLDN7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CLDN7_5end |
Coexpression cluster: | NA |
Association with transcript: | -261bp_to_AK225418_5end |
EntrezGene: | CLDN7 |
HGNC: | 2049 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.01e-35 | 253 |
endodermal cell | 5.19e-22 | 58 |
endo-epithelial cell | 1.80e-20 | 42 |
respiratory epithelial cell | 2.17e-13 | 13 |
kidney tubule cell | 1.55e-08 | 10 |
nephron tubule epithelial cell | 1.55e-08 | 10 |
epithelial cell of tracheobronchial tree | 2.34e-08 | 9 |
epithelial cell of lower respiratory tract | 2.34e-08 | 9 |
epithelial cell of nephron | 3.45e-08 | 15 |
epithelial cell of alimentary canal | 6.16e-08 | 20 |
kidney cell | 6.03e-07 | 17 |
kidney epithelial cell | 6.03e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.38e-20 | 106 |
cell type cancer | 2.32e-14 | 143 |
adenocarcinoma | 1.62e-08 | 25 |