FFCP PHASE1:Hg19::chr11:2017228..2017236,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:2017228..2017236,-
|short_description=p34@H19
|description=CAGE_peak_34_at_H19_5end
|association_with_transcript=-10bp_to_BC106078_5end
|EntrezGene=28312...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283120 | |EntrezGene=283120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_BC106078_5end | |||
|cluster_id=chr11:2017228..2017236,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_34_at_H19_5end | |||
|id=chr11:2017228..2017236,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;6.36e-29;19!CL:0002577;4.75e-15;3!CL:0002536;1.31e-10;2!CL:0002575;1.51e-10;2!CL:0002537;1.54e-09;5!CL:0002541;1.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.05e-29,19;CL:0002577,4.54e-15,3;CL:0002536,1.25e-10,2;CL:0002575,1.51e-10,2;CL:0002537,1.54e-09,5;CL:0002541,1.38e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.03e-17!14;UBERON:0000158!1.03e-17!14;UBERON:0001737!6.41e-15!9;UBERON:0001557!2.38e-14!19;UBERON:0003124!7.37e-13!7;UBERON:0000478!1.59e-12!24;UBERON:0001987!4.14e-08!4;UBERON:0004340!4.14e-08!4;UBERON:0004923!2.03e-07!57;UBERON:0003104!4.36e-07!238;UBERON:0009142!4.36e-07!238;UBERON:0000305!5.27e-07!7;UBERON:0000077!8.27e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.65e-31;24!UBERON:0005631;2.76e-23;10!UBERON:0000158;2.76e-23;10!UBERON:0001737;5.13e-23;9!UBERON:0001557;5.13e-23;9!UBERON:0001987;4.75e-19;4!UBERON:0000305;2.14e-17;7!UBERON:0003124;1.38e-07;3!UBERON:0000920;1.38e-07;3!UBERON:0001723;4.53e-07;3!UBERON:0001033;4.53e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.20e-39,14;UBERON:0000158,1.20e-39,14;UBERON:0000478,2.47e-31,24;UBERON:0003124,3.54e-24,7;UBERON:0001737,4.33e-23,9;UBERON:0001987,4.34e-19,4;UBERON:0004340,4.34e-19,4;UBERON:0000305,2.08e-17,7;UBERON:0001557,2.48e-17,19;UBERON:0004871,3.38e-15,8;UBERON:0004923,6.44e-08,66;UBERON:0000072,1.28e-07,47;UBERON:0000920,1.38e-07,3;UBERON:0001723,5.44e-07,3;UBERON:0001033,5.44e-07,3;UBERON:0010056,5.44e-07,3 | |||
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| ||
|short_description=p34@H19 | |||
}} | }} |
Latest revision as of 06:21, 17 September 2015
Short description: | p34@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -10bp_to_BC106078_5end |
EntrezGene: | H19 |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.05e-29 | 19 |
placental epithelial cell | 4.54e-15 | 3 |
amniotic epithelial cell | 1.25e-10 | 2 |
central nervous system pericyte | 1.51e-10 | 2 |
amnion mesenchymal stem cell | 1.54e-09 | 5 |
chorionic membrane mesenchymal stem cell | 1.38e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.20e-39 | 14 |
membranous layer | 1.20e-39 | 14 |
extraembryonic structure | 2.47e-31 | 24 |
chorion | 3.54e-24 | 7 |
larynx | 4.33e-23 | 9 |
placenta | 4.34e-19 | 4 |
allantois | 4.34e-19 | 4 |
amnion | 2.08e-17 | 7 |
upper respiratory tract | 2.48e-17 | 19 |
somatic layer of lateral plate mesoderm | 3.38e-15 | 8 |
organ component layer | 6.44e-08 | 66 |
segment of respiratory tract | 1.28e-07 | 47 |
egg chorion | 1.38e-07 | 3 |
tongue | 5.44e-07 | 3 |
gustatory system | 5.44e-07 | 3 |
future tongue | 5.44e-07 | 3 |