FFCP PHASE1:Hg19::chr9:34662651..34662656,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10850 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10626 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y4X3,Q5VZ77 | |||
|association_with_transcript=32bp_to_ENST00000259631,NM_006664,uc003zvm.1_5end | |||
|cluster_id=chr9:34662651..34662656,- | |||
|coexpression_cluster_id=C120 | |||
|description=CAGE_peak_1_at_CCL27_5end | |||
|id=chr9:34662651..34662656,- | |||
|ontology_enrichment_celltype=CL:0002159!1.65e-36!13;CL:0000240!6.06e-32!6;CL:0000311!6.06e-32!6;CL:0000079!6.06e-32!6;CL:0000237!6.06e-32!6;CL:0000036!6.06e-32!6;CL:0000357!6.06e-32!6;CL:0000114!6.06e-32!6;CL:0000312!4.76e-25!5;CL:0002621!2.09e-24!3;CL:0000362!5.67e-24!8;CL:0002166!2.73e-23!3;CL:0001014!2.81e-17!2;CL:0001016!2.81e-17!2;CL:0000453!9.58e-15!5;CL:0002077!9.03e-14!33;CL:0002541!3.25e-11!3;CL:0000035!1.68e-09!20;CL:0002336!7.27e-09!1;CL:0002261!7.27e-09!1;CL:0002170!7.27e-09!1;CL:0000990!2.04e-08!8;CL:0000221!3.98e-07!71;CL:0002537!4.43e-07!5;CL:0000451!5.76e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002621;3.41e-43;3!CL:0001014;4.83e-30;2!CL:0001016;4.83e-30;2!CL:0000312;6.31e-26;5!CL:0000240;9.90e-22;6!CL:0000311;9.90e-22;6!CL:0000079;9.90e-22;6!CL:0000237;9.90e-22;6!CL:0000362;1.02e-14;9!CL:0000453;1.23e-12;5!CL:0000840;1.10e-10;5!CL:0002159;1.12e-09;14!CL:0000990;2.05e-07;8!CL:0002251;5.23e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,4.55e-43,3;CL:0001014,4.49e-30,2;CL:0001016,4.49e-30,2;CL:0000312,4.68e-26,5;CL:0000240,7.72e-22,6;CL:0000311,7.72e-22,6;CL:0000079,7.72e-22,6;CL:0000237,7.72e-22,6;CL:0000036,7.72e-22,6;CL:0000357,7.72e-22,6;CL:0000114,7.72e-22,6;CL:0000362,8.67e-15,9;CL:0000453,1.19e-12,5;CL:0000840,1.07e-10,5;CL:0001029,1.07e-10,5;CL:0002159,1.01e-09,14;CL:0000990,2.02e-07,8;CL:0002251,5.45e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000357;9.90e-22;6!CL:0000114;9.90e-22;6!UBERON:0004874;9.98e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!2.09e-24!3;UBERON:0001003!1.64e-19!14;UBERON:0007376!1.64e-19!14;UBERON:0007383!1.64e-19!14;UBERON:0001708!1.25e-17!4;UBERON:0001704!1.25e-17!4;UBERON:0005631!1.58e-13!14;UBERON:0000158!1.58e-13!14;UBERON:0002090!6.01e-12!6;UBERON:0000476!3.25e-11!3;UBERON:0000920!3.25e-11!3;UBERON:0003124!2.26e-10!7;UBERON:0001828!1.70e-09!8;UBERON:0007029!2.04e-09!1;UBERON:0000989!2.22e-09!1;UBERON:0008811!2.22e-09!1;UBERON:0006258!2.22e-09!1;UBERON:0005876!2.22e-09!1;UBERON:0004874!2.22e-09!1;UBERON:0002370!8.85e-09!4;UBERON:0005058!8.85e-09!4;UBERON:0009113!8.85e-09!4;UBERON:0003295!8.85e-09!4;UBERON:0005562!8.85e-09!4;UBERON:0000478!8.07e-08!24;UBERON:0004807!7.06e-07!28;UBERON:0003129!9.76e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;3.41e-43;3!UBERON:0002370;6.99e-29;2!UBERON:0005058;6.99e-29;2!UBERON:0009113;6.99e-29;2!UBERON:0010371;4.29e-22;31!UBERON:0003929;5.92e-19;7!UBERON:0003350;1.14e-16;8!UBERON:0001828;1.14e-16;8!UBERON:0007029;8.63e-16;1!UBERON:0000989;9.98e-16;1!UBERON:0008811;9.98e-16;1!UBERON:0001003;2.02e-15;15!UBERON:0007376;2.02e-15;15!UBERON:0004177;3.54e-12;5!UBERON:0005057;3.54e-12;5!UBERON:0000486;2.53e-11;12!UBERON:0003729;1.70e-10;13!UBERON:0000161;2.37e-07;19!UBERON:0000166;2.37e-07;19!UBERON:0000344;5.23e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.55e-43,3;UBERON:0003350,1.27e-16,8;UBERON:0001828,1.27e-16,8;UBERON:0007029,8.63e-16,1;UBERON:0000989,9.99e-16,1;UBERON:0008811,9.99e-16,1;UBERON:0006258,9.99e-16,1;UBERON:0005876,9.99e-16,1;UBERON:0004874,9.99e-16,1;UBERON:0001003,1.77e-15,15;UBERON:0007376,1.77e-15,15;UBERON:0007383,1.77e-15,15;UBERON:0002370,5.24e-15,4;UBERON:0005058,5.24e-15,4;UBERON:0009113,5.24e-15,4;UBERON:0003295,5.24e-15,4;UBERON:0005562,5.24e-15,4;UBERON:0004807,1.22e-12,28;UBERON:0003729,1.81e-10,13;UBERON:0003351,2.52e-10,6;UBERON:0004177,5.59e-09,7;UBERON:0005057,5.59e-09,7;UBERON:0000344,5.45e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.1843473012255,1.09098448236334,2.58124135850103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53650399572076,2.24803506515239,1.70899253099772,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.992425680696705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.97419063809651,165.593618275401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96968942711435,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.34282092365053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22718928688412,1.67601728598816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@CCL27 | |||
}} |
Latest revision as of 06:03, 17 September 2015
Short description: | p1@CCL27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCL27_5end |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | 32bp_to_ENST00000259631, NM_006664, uc003zvm.1_5end |
EntrezGene: | CCL27 |
HGNC: | 10626 |
UniProt: | Q9Y4X3Q5VZ77 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 4.55e-43 | 3 |
CD1a-positive Langerhans cell | 4.49e-30 | 2 |
immature CD1a-positive Langerhans cell | 4.49e-30 | 2 |
keratinocyte | 4.68e-26 | 5 |
stratified squamous epithelial cell | 7.72e-22 | 6 |
keratin accumulating cell | 7.72e-22 | 6 |
stratified epithelial cell | 7.72e-22 | 6 |
keratinizing barrier epithelial cell | 7.72e-22 | 6 |
epithelial fate stem cell | 7.72e-22 | 6 |
stratified epithelial stem cell | 7.72e-22 | 6 |
surface ectodermal cell | 7.72e-22 | 6 |
epidermal cell | 8.67e-15 | 9 |
Langerhans cell | 1.19e-12 | 5 |
immature conventional dendritic cell | 1.07e-10 | 5 |
common dendritic progenitor | 1.07e-10 | 5 |
general ecto-epithelial cell | 1.01e-09 | 14 |
conventional dendritic cell | 2.02e-07 | 8 |
epithelial cell of alimentary canal | 5.45e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 4.55e-43 | 3 |
epithelium of mucosa | 1.27e-16 | 8 |
gingiva | 1.27e-16 | 8 |
surface | 8.63e-16 | 1 |
penis | 9.99e-16 | 1 |
intromittent organ | 9.99e-16 | 1 |
lateral plate mesenchyme | 9.99e-16 | 1 |
undifferentiated genital tubercle | 9.99e-16 | 1 |
somatopleure | 9.99e-16 | 1 |
skin epidermis | 1.77e-15 | 15 |
outer epithelium | 1.77e-15 | 15 |
enveloping layer of ectoderm | 1.77e-15 | 15 |
thymus | 5.24e-15 | 4 |
hemolymphoid system gland | 5.24e-15 | 4 |
thymic region | 5.24e-15 | 4 |
pharyngeal gland | 5.24e-15 | 4 |
thymus primordium | 5.24e-15 | 4 |
respiratory system epithelium | 1.22e-12 | 28 |
mouth mucosa | 1.81e-10 | 13 |
pharyngeal epithelium | 2.52e-10 | 6 |
hemopoietic organ | 5.59e-09 | 7 |
immune organ | 5.59e-09 | 7 |
mucosa | 5.45e-07 | 20 |