FFCP PHASE1:Hg19::chr20:57414743..57414785,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2778 | |EntrezGene=2778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4392 | |HGNC=4392 | ||
|TSSclassifier=strong | |||
|UniProt=O95467 | |UniProt=O95467 | ||
|association_with_transcript=0bp_to_ENST00000313949_5end | |association_with_transcript=0bp_to_ENST00000313949_5end | ||
|cluster_id=chr20:57414743..57414785,+ | |||
|coexpression_cluster_id=C4055 | |||
|description=CAGE_peak_18_at_GNAS_5end | |description=CAGE_peak_18_at_GNAS_5end | ||
|id=chr20:57414743..57414785,+ | |id=chr20:57414743..57414785,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.50e-16!115;UBERON:0001017!2.97e-15!82;UBERON:0000073!3.34e-14!94;UBERON:0001016!3.34e-14!94;UBERON:0005743!5.57e-14!86;UBERON:0001049!2.49e-13!57;UBERON:0005068!2.49e-13!57;UBERON:0006241!2.49e-13!57;UBERON:0007135!2.49e-13!57;UBERON:0000955!2.62e-11!69;UBERON:0006238!2.62e-11!69;UBERON:0003075!2.80e-11!86;UBERON:0007284!2.80e-11!86;UBERON:0002346!3.26e-11!90;UBERON:0002616!2.97e-10!59;UBERON:0000924!7.97e-09!173;UBERON:0006601!7.97e-09!173;UBERON:0000153!8.59e-09!129;UBERON:0007811!8.59e-09!129;UBERON:0004121!9.63e-09!169;UBERON:0002780!5.23e-08!41;UBERON:0001890!5.23e-08!41;UBERON:0006240!5.23e-08!41;UBERON:0000033!7.12e-08!123;UBERON:0003076!8.97e-08!15;UBERON:0003057!8.97e-08!15;UBERON:0003080!1.09e-07!42 | |ontology_enrichment_uberon=UBERON:0007023!1.50e-16!115;UBERON:0001017!2.97e-15!82;UBERON:0000073!3.34e-14!94;UBERON:0001016!3.34e-14!94;UBERON:0005743!5.57e-14!86;UBERON:0001049!2.49e-13!57;UBERON:0005068!2.49e-13!57;UBERON:0006241!2.49e-13!57;UBERON:0007135!2.49e-13!57;UBERON:0000955!2.62e-11!69;UBERON:0006238!2.62e-11!69;UBERON:0003075!2.80e-11!86;UBERON:0007284!2.80e-11!86;UBERON:0002346!3.26e-11!90;UBERON:0002616!2.97e-10!59;UBERON:0000924!7.97e-09!173;UBERON:0006601!7.97e-09!173;UBERON:0000153!8.59e-09!129;UBERON:0007811!8.59e-09!129;UBERON:0004121!9.63e-09!169;UBERON:0002780!5.23e-08!41;UBERON:0001890!5.23e-08!41;UBERON:0006240!5.23e-08!41;UBERON:0000033!7.12e-08!123;UBERON:0003076!8.97e-08!15;UBERON:0003057!8.97e-08!15;UBERON:0003080!1.09e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0002298;3.01e-14;6!UBERON:0000988;5.28e-11;3!UBERON:0000922;1.84e-09;49!UBERON:0004732;7.51e-09;13!UBERON:0003296;1.17e-08;4!UBERON:0010133;1.17e-08;4!UBERON:0000007;1.28e-08;2!UBERON:0002148;3.42e-08;2!UBERON:0006331;3.42e-08;2!UBERON:0009662;3.42e-08;2!UBERON:0003127;6.31e-08;2!UBERON:0000341;6.53e-08;2!UBERON:0004733;5.92e-07;12!UBERON:0002028;5.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,2.93e-14,6;UBERON:0000988,5.20e-11,3;UBERON:0003076,2.20e-10,15;UBERON:0003057,2.20e-10,15;UBERON:0004732,7.52e-09,13;UBERON:0007023,8.72e-09,114;UBERON:0001016,9.82e-09,89;UBERON:0003296,1.05e-08,4;UBERON:0010133,1.05e-08,4;UBERON:0000007,1.28e-08,2;UBERON:0002148,3.37e-08,2;UBERON:0006331,3.37e-08,2;UBERON:0009662,3.37e-08,2;UBERON:0003127,5.70e-08,2;UBERON:0001017,7.40e-08,81;UBERON:0000341,7.51e-08,2;UBERON:0004121,5.64e-07,171;UBERON:0000924,5.64e-07,171;UBERON:0006601,5.64e-07,171;UBERON:0004733,5.85e-07,12;UBERON:0002028,5.85e-07,12;UBERON:0007277,5.85e-07,12;UBERON:0011216,5.98e-07,223 | |||
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| ||
|short_description=p18@GNAS | |short_description=p18@GNAS | ||
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Latest revision as of 05:52, 17 September 2015
Short description: | p18@GNAS |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_GNAS_5end |
Coexpression cluster: | C4055_skeletal_anaplastic_tongue_pituitary_diaphragm_throat_trachea |
Association with transcript: | 0bp_to_ENST00000313949_5end |
EntrezGene: | GNAS |
HGNC: | 4392 |
UniProt: | O95467 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brainstem | 2.93e-14 | 6 |
pons | 5.20e-11 | 3 |
posterior neural tube | 2.20e-10 | 15 |
chordal neural plate | 2.20e-10 | 15 |
segmental subdivision of nervous system | 7.52e-09 | 13 |
adult organism | 8.72e-09 | 114 |
nervous system | 9.82e-09 | 89 |
gland of diencephalon | 1.05e-08 | 4 |
neuroendocrine gland | 1.05e-08 | 4 |
pituitary gland | 1.28e-08 | 2 |
locus ceruleus | 3.37e-08 | 2 |
brainstem nucleus | 3.37e-08 | 2 |
hindbrain nucleus | 3.37e-08 | 2 |
open tracheal system trachea | 5.70e-08 | 2 |
central nervous system | 7.40e-08 | 81 |
throat | 7.51e-08 | 2 |
ectoderm-derived structure | 5.64e-07 | 171 |
ectoderm | 5.64e-07 | 171 |
presumptive ectoderm | 5.64e-07 | 171 |
segmental subdivision of hindbrain | 5.85e-07 | 12 |
hindbrain | 5.85e-07 | 12 |
presumptive hindbrain | 5.85e-07 | 12 |
organ system subdivision | 5.98e-07 | 223 |