FFCP PHASE1:Hg19::chr15:33486907..33486928,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100653168,342184 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3768 | |||
|TSSclassifier=strong | |||
|UniProt=C9JFW6,Q68DA7 | |||
|association_with_transcript=-10bp_to_ENST00000320930,uc001zhh.2_5end | |||
|cluster_id=chr15:33486907..33486928,- | |||
|coexpression_cluster_id=C3108 | |||
|description=CAGE_peak_1_at_FMN1_5end | |||
|id=chr15:33486907..33486928,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.96e-21;82!UBERON:0009117;1.94e-08;10!UBERON:0005564;1.94e-08;10!UBERON:0006241;3.68e-08;3!UBERON:0003057;3.68e-08;3!UBERON:0002532;3.75e-08;206!UBERON:0010316;3.75e-08;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;1.61e-07;22!DOID:2994;1.61e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.77e-07,22;DOID:2994,1.77e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.06e-34!57;UBERON:0005068!2.06e-34!57;UBERON:0006241!2.06e-34!57;UBERON:0007135!2.06e-34!57;UBERON:0001017!2.92e-32!82;UBERON:0000073!3.88e-32!94;UBERON:0001016!3.88e-32!94;UBERON:0005743!3.19e-31!86;UBERON:0000955!2.85e-30!69;UBERON:0006238!2.85e-30!69;UBERON:0003075!3.73e-30!86;UBERON:0007284!3.73e-30!86;UBERON:0002780!5.17e-30!41;UBERON:0001890!5.17e-30!41;UBERON:0006240!5.17e-30!41;UBERON:0002346!3.27e-29!90;UBERON:0003080!6.32e-29!42;UBERON:0002616!1.51e-28!59;UBERON:0007023!7.51e-28!115;UBERON:0003056!1.77e-25!61;UBERON:0002020!7.96e-24!34;UBERON:0003528!7.96e-24!34;UBERON:0001893!8.53e-24!34;UBERON:0002791!8.67e-23!33;UBERON:0001869!3.72e-22!32;UBERON:0004121!1.44e-19!169;UBERON:0000924!2.31e-19!173;UBERON:0006601!2.31e-19!173;UBERON:0000033!7.39e-19!123;UBERON:0001950!9.71e-19!20;UBERON:0000153!1.62e-18!129;UBERON:0007811!1.62e-18!129;UBERON:0002619!2.28e-18!22;UBERON:0000956!2.04e-16!25;UBERON:0000203!2.04e-16!25;UBERON:0000062!5.28e-11!511;UBERON:0002308!5.25e-09!9;UBERON:0000125!5.25e-09!9;UBERON:0002420!5.57e-09!9;UBERON:0007245!5.57e-09!9;UBERON:0010009!5.57e-09!9;UBERON:0010011!5.57e-09!9;UBERON:0000454!5.57e-09!9;UBERON:0000200!9.07e-08!6;UBERON:0001894!1.02e-07!7;UBERON:0006222!1.02e-07!7;UBERON:0000922!1.85e-07!612;UBERON:0009663!3.39e-07!7;UBERON:0003076!5.90e-07!15;UBERON:0003057!5.90e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.43e-36;34!UBERON:0002780;1.81e-35;41!UBERON:0001890;1.81e-35;41!UBERON:0003528;3.02e-35;34!UBERON:0002020;3.02e-35;34!UBERON:0002619;9.30e-35;22!UBERON:0001950;1.93e-34;20!UBERON:0001869;1.80e-33;32!UBERON:0002791;3.33e-33;32!UBERON:0000073;2.44e-31;53!UBERON:0002616;2.44e-31;53!UBERON:0000956;3.98e-30;25!UBERON:0000203;3.98e-30;25!UBERON:0001017;9.04e-24;75!UBERON:0000955;1.02e-22;68!UBERON:0001016;1.52e-18;83!UBERON:0000200;1.04e-16;6!UBERON:0002298;7.47e-15;6!UBERON:0001894;7.90e-13;7!UBERON:0000125;1.20e-12;9!UBERON:0002308;1.20e-12;9!UBERON:0002420;1.30e-12;9!UBERON:0007245;1.30e-12;9!UBERON:0010009;1.30e-12;9!UBERON:0010011;1.30e-12;9!UBERON:0000454;1.30e-12;9!UBERON:0007023;1.34e-12;114!UBERON:0003296;5.30e-11;4!UBERON:0010133;5.30e-11;4!UBERON:0002784;7.98e-11;4!UBERON:0001872;1.62e-09;5!UBERON:0001871;1.95e-09;6!UBERON:0001870;2.16e-09;3!UBERON:0002021;3.27e-09;5!UBERON:0009663;1.43e-08;7!UBERON:0000349;1.91e-08;5!UBERON:0000988;2.79e-08;3!UBERON:0001896;2.98e-08;3!UBERON:0005290;2.98e-08;3!UBERON:0002240;3.68e-08;3!UBERON:0005174;3.68e-08;3!UBERON:0001137;3.68e-08;3!UBERON:0011216;4.53e-08;132!UBERON:0000473;8.87e-08;8!UBERON:0003135;1.08e-07;11!UBERON:0004733;4.79e-07;12!UBERON:0002028;4.79e-07;12!UBERON:0002702;9.21e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.23e-63,56;UBERON:0005068,1.23e-63,56;UBERON:0006241,1.23e-63,56;UBERON:0007135,1.23e-63,56;UBERON:0000073,2.13e-57,53;UBERON:0002616,2.13e-57,53;UBERON:0001016,2.22e-53,89;UBERON:0002780,7.75e-53,41;UBERON:0001890,7.75e-53,41;UBERON:0003080,7.75e-53,41;UBERON:0006240,7.75e-53,41;UBERON:0000955,9.91e-53,68;UBERON:0006238,9.91e-53,68;UBERON:0001017,1.61e-52,81;UBERON:0003075,2.23e-47,82;UBERON:0007284,2.23e-47,82;UBERON:0002346,3.33e-47,86;UBERON:0003528,1.84e-41,34;UBERON:0002020,1.84e-41,34;UBERON:0001893,2.13e-41,34;UBERON:0003056,1.96e-40,61;UBERON:0007023,1.16e-38,114;UBERON:0001869,1.41e-37,32;UBERON:0002791,2.75e-37,32;UBERON:0010371,1.07e-36,104;UBERON:0002619,1.03e-34,22;UBERON:0001950,2.04e-34,20;UBERON:0000956,4.37e-30,25;UBERON:0000203,4.37e-30,25;UBERON:0004121,3.37e-27,171;UBERON:0000924,3.37e-27,171;UBERON:0006601,3.37e-27,171;UBERON:0010314,1.52e-26,132;UBERON:0011216,1.85e-18,223;UBERON:0000200,9.40e-17,6;UBERON:0000025,4.06e-16,192;UBERON:0002298,6.22e-15,6;UBERON:0001894,7.59e-13,7;UBERON:0006222,7.59e-13,7;UBERON:0000125,1.09e-12,9;UBERON:0002308,1.09e-12,9;UBERON:0002420,1.22e-12,9;UBERON:0007245,1.22e-12,9;UBERON:0010009,1.22e-12,9;UBERON:0010011,1.22e-12,9;UBERON:0000454,1.22e-12,9;UBERON:0003076,4.44e-12,15;UBERON:0003057,4.44e-12,15;UBERON:0003296,6.12e-11,4;UBERON:0010133,6.12e-11,4;UBERON:0002784,6.95e-11,4;UBERON:0004111,1.34e-10,240;UBERON:0001872,1.57e-09,5;UBERON:0001871,1.97e-09,6;UBERON:0001870,2.17e-09,3;UBERON:0000483,2.33e-09,306;UBERON:0002021,3.56e-09,5;UBERON:0000119,3.78e-09,309;UBERON:0009663,1.31e-08,7;UBERON:0000349,2.11e-08,5;UBERON:0000988,2.53e-08,3;UBERON:0001896,2.73e-08,3;UBERON:0005290,2.73e-08,3;UBERON:0010096,2.73e-08,3;UBERON:0002240,3.97e-08,3;UBERON:0005174,3.97e-08,3;UBERON:0001137,3.97e-08,3;UBERON:0000473,7.48e-08,8;UBERON:0003135,9.43e-08,11;UBERON:0004733,4.40e-07,12;UBERON:0002028,4.40e-07,12;UBERON:0007277,4.40e-07,12;UBERON:0002702,9.22e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0.434021741431704,0.895661896959697,1.29557466407592,0.515151135268373,0,0,0,0.232429036905685,0.822335776043652,0.309706370895104,0,0,0,0,0,0,0.564727018627814,0.818718450173537,0.224723484445085,0,0,0,0.329851300186716,0,0,0,0,0.622822248995575,0.502497330513487,0,0,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0.419317291016752,0.336985893439485,0,0,0.285012743741249,0.19891667719909,0,0,0.546138611262131,0,2.56038133539904,0.800791974072025,0.574752439954483,0,0.954053754535364,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0.589211814949674,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.443458794925128,0.175669571386252,3.27447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0.286804595389004,0.121973706129595,0.927708378250397,0.464775771478074,0.414644220061482,0.504641701751257,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.234817388471643,0,0,0,0.790204397959275,0,0.738651018262192,0.234004265139238,0.445893486866185,0,0,0,0.0895585227028483,0,0,0,0,1.4512968087854,0.720599767084807,0.37872730027914,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.307160702099232,7.95318118213038,2.39138007897872,0.222617410045812,0,0.422250816255987,1.39473591775749,0.276283915531148,0.251932747854276,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,9.69332746095218,5.84439018419663,0,0.260427761085233,0,0,0,0,0,0.689486746482929,0,0,2.65722415744152,0.60298219312704,0,0.663475559587348,0.591095237907095,3.51016635446356,0,0.975966209950223,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0.995261931078505,0,0,0,0,0,1.21322039365219,0.802577647298789,0.702793337176017,0,0,0,0,0,0.30607276163049,0.505492637027904,0,0,0,0.992975867626496,0.313932918407225,0,0.853828638089378,0,0,0,0,2.44617335538842,10.319161948297,0,0,0,0,0,20.3382666702479,0.137041924646751,0,14.118307498161,0,0.320635281006135,0.213452994739353,0.39961921916426,0.288180834308212,0.458146384663663,0,0,0,0,0,0,0,0.866851769704557,2.40168115483916,0.958337652243951,0,0,0,0,0.458320848023367,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,3.13267834056624,0.482259445395058,0.275078873194468,0.415440338029185,0.2249738915515,3.0952078182318,11.7854139916568,0.670869375198532,0.0788057072991982,1.15400093896996,0,0,0.383830394638891,0,0.662091970365432,0,0,0,0,1.19730191562487,0.985110248992068,0.170388021785422,0,0,0,5.68845007990822,3.17358244182456,1.19760786519031,0,0.533937062838473,3.14408610199332,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,2.51286554000375,11.5188863395708,12.5687052849022,13.520620516302,5.16068276121064,2.88415533995816,4.71932662354514,1.66018361923477,0.124980407962107,0,1.42732666772484,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.963099152036517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95460740292461,0,0,0.163565394255844,0,0,0,0,0,0,0,0.184105950251841,0,0.622077260032973,2.55788742607303,8.73380972313123,0,2.07498312564826,0,0,0,0,0,0,0,0,0,6.29446405945303,18.420554922326,11.4936378521149,5.53814183450038,0.504143392443436,9.61285809252629,9.85001438354292,0,0.0981477185010256,0.11796972334774,0,0,0,0,0.198916222116275,0.225630985047772,1.0085253435176,0,0.785720083444267,0,0.295712172434091,11.8190773082191,14.8404838736631,14.0547021620805,12.8099936591692,0.546974809018219,0,0,12.4868583495331,0,10.1783348816874,13.451348888753,4.24875922965642,2.27662191351298,0,0,0.342976018874837,3.80630504670258,10.3920982229302,0.118193840883968,0,0.078493092850514,1.72827148907602,0.560544326627578,0,0.215927591218621,5.7330202546446,18.6553780301073,10.5869119860927,0,0,0,0,0.17071847709395,0,0,0.236664001461131,0.426067023795788,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0.307988420568741,0,0.485710993059139,0,0.397901550322736,0,0,1.09940516745429,0.452888530700021,0.154348316215889,0,0,0,1.17838273550813,8.83388102017254,4.1586496045792,1.2679671827502,0,0.0939839179798536,0.322289439867886,0.0999411559249289,0.178553938605658,0.352894871715692,0,0,0,3.01013124618048,0,7.34308094061879,0.872701380680755,0.5290268405154,0,0,0,1.00933139868063,0.437062287854782,0,4.9974526573571,1.87052183685892,9.09759505394965,0,3.18270532516606,6.69910325390446,4.1458471972939,1.75836092965222,0,0,0.387533459016037,1.67601728598816,0,0.0636471582781649,0,0,0,0.202056159043763,0,0,0,1.60091018816573,0,0,0,0.366724332548599,0,0,0,0 | |||
|short_description=p1@FMN1 | |||
}} |
Latest revision as of 05:48, 17 September 2015
Short description: | p1@FMN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FMN1_5end |
Coexpression cluster: | C3108_occipital_retina_eye_pineal_parietal_medial_paracentral |
Association with transcript: | -10bp_to_ENST00000320930, uc001zhh.2_5end |
EntrezGene: | 100653168,342184 |
HGNC: | 3768 |
UniProt: | C9JFW6Q68DA7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.77e-07 | 22 |
germ cell cancer | 1.77e-07 | 22 |