FFCP PHASE1:Hg19::chr11:20049037..20049050,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89797 | |EntrezGene=89797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15997 | |HGNC=15997 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-49bp_to_ENST00000526675_5end | |association_with_transcript=-49bp_to_ENST00000526675_5end | ||
|cluster_id=chr11:20049037..20049050,+ | |||
|description=CAGE_peak_16_at_NAV2_5end | |description=CAGE_peak_16_at_NAV2_5end | ||
|id=chr11:20049037..20049050,+ | |id=chr11:20049037..20049050,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.75e-13!7;CL:0000586!1.75e-13!7;CL:0002541!1.51e-09!3;CL:0002322!3.23e-08!5 | |ontology_enrichment_celltype=CL:0000039!1.75e-13!7;CL:0000586!1.75e-13!7;CL:0002541!1.51e-09!3;CL:0002322!3.23e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002541;3.25e-34;3!CL:0000349;1.28e-14;19!CL:0000167;2.91e-12;1!CL:0000164;2.91e-12;1!CL:0000502;2.91e-12;1!CL:0000172;2.91e-12;1!CL:0000313;2.91e-12;1!CL:0000173;2.91e-12;1!CL:0002537;8.49e-10;5!CL:0000039;1.84e-07;7!CL:0000586;1.84e-07;7!CL:0000159;9.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.44e-34,3;CL:0000349,1.23e-14,19;CL:0000167,1.96e-12,1;CL:0000164,1.96e-12,1;CL:0000502,1.96e-12,1;CL:0000172,1.96e-12,1;CL:0000173,1.96e-12,1;CL:0002351,1.96e-12,1;CL:0000313,2.75e-12,1;CL:0002537,7.77e-10,5;CL:0000039,1.84e-07,7;CL:0000586,1.84e-07,7;CL:0000159,9.02e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.48e-12;1!CL:0002351;2.91e-12;1 | |||
|ontology_enrichment_disease=DOID:1749!3.43e-10!14;DOID:305!8.19e-07!106 | |ontology_enrichment_disease=DOID:1749!3.43e-10!14;DOID:305!8.19e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:0050619;9.92e-13;1!DOID:1357;9.92e-13;1!DOID:1799;1.25e-12;1!DOID:10165;1.25e-12;1!DOID:1798;1.25e-12;1!DOID:2152;2.91e-12;1!DOID:4430;2.91e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.11e-12,1;DOID:1357,1.11e-12,1;DOID:1799,1.25e-12,1;DOID:10165,1.25e-12,1;DOID:1798,1.25e-12,1;DOID:4430,1.96e-12,1;DOID:2152,2.75e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.29e-18!14;UBERON:0000158!3.29e-18!14;UBERON:0000344!8.17e-12!12;UBERON:0003135!1.74e-10!11;UBERON:0004923!2.58e-10!57;UBERON:0003124!3.09e-10!7;UBERON:0000478!1.19e-09!24;UBERON:0000305!1.28e-09!7;UBERON:0000476!1.51e-09!3;UBERON:0000920!1.51e-09!3;UBERON:0003408!1.10e-08!10;UBERON:0000974!2.26e-08!10;UBERON:0004871!2.33e-08!8;UBERON:0003729!2.55e-08!5;UBERON:0000166!2.96e-08!21;UBERON:0003133!2.05e-07!48;UBERON:0001044!2.43e-07!6;UBERON:0003293!2.43e-07!6;UBERON:0003294!2.43e-07!6;UBERON:0010047!2.43e-07!6;UBERON:0000167!2.43e-07!6;UBERON:0006562!3.96e-07!11;UBERON:0000165!4.25e-07!28;UBERON:0000930!4.25e-07!28 | |ontology_enrichment_uberon=UBERON:0005631!3.29e-18!14;UBERON:0000158!3.29e-18!14;UBERON:0000344!8.17e-12!12;UBERON:0003135!1.74e-10!11;UBERON:0004923!2.58e-10!57;UBERON:0003124!3.09e-10!7;UBERON:0000478!1.19e-09!24;UBERON:0000305!1.28e-09!7;UBERON:0000476!1.51e-09!3;UBERON:0000920!1.51e-09!3;UBERON:0003408!1.10e-08!10;UBERON:0000974!2.26e-08!10;UBERON:0004871!2.33e-08!8;UBERON:0003729!2.55e-08!5;UBERON:0000166!2.96e-08!21;UBERON:0003133!2.05e-07!48;UBERON:0001044!2.43e-07!6;UBERON:0003293!2.43e-07!6;UBERON:0003294!2.43e-07!6;UBERON:0010047!2.43e-07!6;UBERON:0000167!2.43e-07!6;UBERON:0006562!3.96e-07!11;UBERON:0000165!4.25e-07!28;UBERON:0000930!4.25e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.25e-34;3!UBERON:0000920;3.25e-34;3!UBERON:0005631;9.05e-28;10!UBERON:0000158;9.05e-28;10!UBERON:0000478;2.25e-16;24!UBERON:0001764;9.92e-13;1!UBERON:0001825;9.92e-13;1!UBERON:0001000;2.91e-12;1!UBERON:0004911;2.91e-12;1!UBERON:0005352;2.91e-12;1!UBERON:0000305;3.05e-07;7!UBERON:0004909;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.44e-34,3;UBERON:0005631,2.60e-28,14;UBERON:0000158,2.60e-28,14;UBERON:0003124,7.19e-26,7;UBERON:0000478,2.13e-16,24;UBERON:0001764,1.11e-12,1;UBERON:0001825,1.11e-12,1;UBERON:0004911,2.75e-12,1;UBERON:0001000,3.85e-12,1;UBERON:0005352,3.85e-12,1;UBERON:0004923,1.34e-07,66;UBERON:0000305,2.86e-07,7;UBERON:0004909,9.02e-07,2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0.527533956456907,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.414644220061482,1.7662459561294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.564862804660675,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,2.07875276582847,1.53580351049616,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,1.25481369850743,0,0,0.922255617552241,4.30836693166906,9.66961610105872,4.78501739597879,1.19076871422421,8.52855641629816,0,0,0,0,0,0,0,0,0.421996129056054,0.652931232636591,0.706765357169704,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.870592065804026,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0.157611414598396,0.629455057619977,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24046059875633,0,0,0,0.573409195690071,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17777262201231,0,0.550285795565037,0.115525666150338,0,0,0,0,0,0,3.40478702825849,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0.255524855279191,0,0,0,0,2.7497734750418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38251932362818,0.430227358820278,0,0,0,0,0,0,1.34226518157351,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,1.64973582971138,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.546327859818478,0,0.203977659483963,0.26721740526556,0,0.50141507858475,0.0757786982182394,0,0,0,0,0.23806443146374,0.0645889098360061,0.372448285775147,0,0,0.404234377916439,0,0.342233301085281,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p16@NAV2 | |short_description=p16@NAV2 | ||
}} | }} |
Latest revision as of 05:46, 17 September 2015
Short description: | p16@NAV2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_NAV2_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000526675_5end |
EntrezGene: | NAV2 |
HGNC: | 15997 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.44e-34 | 3 |
extraembryonic cell | 1.23e-14 | 19 |
peptide hormone secreting cell | 1.96e-12 | 1 |
enteroendocrine cell | 1.96e-12 | 1 |
type D enteroendocrine cell | 1.96e-12 | 1 |
somatostatin secreting cell | 1.96e-12 | 1 |
pancreatic D cell | 1.96e-12 | 1 |
progenitor cell of endocrine pancreas | 1.96e-12 | 1 |
serous secreting cell | 2.75e-12 | 1 |
amnion mesenchymal stem cell | 7.77e-10 | 5 |
germ line cell | 1.84e-07 | 7 |
germ cell | 1.84e-07 | 7 |
seromucus secreting cell | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.44e-34 | 3 |
extraembryonic membrane | 2.60e-28 | 14 |
membranous layer | 2.60e-28 | 14 |
chorion | 7.19e-26 | 7 |
extraembryonic structure | 2.13e-16 | 24 |
maxillary sinus | 1.11e-12 | 1 |
paranasal sinus | 1.11e-12 | 1 |
epithelium of female gonad | 2.75e-12 | 1 |
vas deferens | 3.85e-12 | 1 |
spermatic cord | 3.85e-12 | 1 |
organ component layer | 1.34e-07 | 66 |
amnion | 2.86e-07 | 7 |
epithelium of gonad | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.11e-12 | 1 |
maxillary sinus cancer | 1.11e-12 | 1 |
islet cell tumor | 1.25e-12 | 1 |
endocrine pancreas cancer | 1.25e-12 | 1 |
pancreatic endocrine carcinoma | 1.25e-12 | 1 |
somatostatinoma | 1.96e-12 | 1 |
ovary epithelial cancer | 2.75e-12 | 1 |