FFCP PHASE1:Hg19::chr6:24358196..24358199,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51473 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18141 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UHG0,E9PGI5 | |||
|association_with_transcript=80bp_to_ENST00000378454,ENST00000451359,NM_016356,uc003ndx.2_5end | |||
|cluster_id=chr6:24358196..24358199,- | |||
|coexpression_cluster_id=C860 | |||
|description=CAGE_peak_8_at_DCDC2_5end | |||
|id=chr6:24358196..24358199,- | |||
|ontology_enrichment_celltype=CL:1000507!1.23e-07!12;CL:1000494!1.23e-07!12;CL:0002149!2.86e-07!6;CL:0002255!2.86e-07!6;CL:1000449!2.90e-07!16;CL:0000066!9.78e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.61e-14;1!CL:0000159;6.57e-08;2!CL:0002253;6.57e-08;2!CL:0002535;6.57e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,2.11e-14,1;CL:0002253,5.74e-08,2;CL:0002535,7.03e-08,2;CL:0000159,7.52e-08,2;CL:0000066,2.25e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0003104;4.60e-07;31 | |||
|ontology_enrichment_disease=DOID:120!1.70e-13!27;DOID:299!1.20e-12!25;DOID:193!2.42e-12!29;DOID:305!7.08e-11!106;DOID:0050687!3.08e-10!143;DOID:162!1.66e-08!235;DOID:3119!2.68e-08!14;DOID:14566!3.99e-08!239;DOID:3001!2.86e-07!6;DOID:4468!7.82e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.06e-27;2!DOID:2152;1.61e-14;1!DOID:299;2.48e-13;25!DOID:120;2.41e-12;27!DOID:193;1.72e-11;29!DOID:3119;4.55e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.60e-27,2;DOID:2152,2.11e-14,1;DOID:299,2.75e-13,25;DOID:120,2.86e-12,27;DOID:0050687,5.72e-12,143;DOID:193,2.01e-11,29;DOID:305,2.12e-11,106;DOID:3119,4.19e-09,14;DOID:162,5.52e-08,235;DOID:14566,8.74e-08,239;DOID:0050686,8.87e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0005172!2.59e-15!55;UBERON:0005173!2.59e-15!55;UBERON:0002417!2.98e-13!61;UBERON:0000916!2.98e-13!61;UBERON:0000466!3.86e-13!126;UBERON:0005177!2.94e-11!107;UBERON:0003929!6.33e-11!54;UBERON:0005911!1.49e-10!82;UBERON:0009569!2.77e-10!113;UBERON:0009497!3.05e-10!25;UBERON:0000015!3.05e-10!25;UBERON:0002423!3.05e-10!25;UBERON:0006235!3.05e-10!25;UBERON:0004161!3.05e-10!25;UBERON:0002113!2.22e-09!27;UBERON:0003918!2.22e-09!27;UBERON:0005095!2.22e-09!27;UBERON:0007687!2.22e-09!27;UBERON:0002294!7.08e-09!7;UBERON:0001173!7.08e-09!7;UBERON:0004912!7.08e-09!7;UBERON:0000464!1.34e-08!104;UBERON:0003134!1.75e-08!37;UBERON:0000474!1.75e-08!37;UBERON:0002046!1.83e-08!5;UBERON:0004117!1.83e-08!5;UBERON:0007689!1.83e-08!5;UBERON:0007123!1.83e-08!5;UBERON:0003091!1.83e-08!5;UBERON:0002110!4.07e-08!3;UBERON:0006242!4.07e-08!3;UBERON:0002368!4.24e-08!35;UBERON:0003133!4.64e-08!48;UBERON:0009773!1.23e-07!12;UBERON:0001231!1.23e-07!12;UBERON:0004810!1.23e-07!12;UBERON:0000489!1.54e-07!32;UBERON:0003886!1.88e-07!63;UBERON:0003100!2.24e-07!41;UBERON:0002553!2.70e-07!70;UBERON:0004211!2.90e-07!16;UBERON:0001285!2.90e-07!16;UBERON:0007684!2.90e-07!16;UBERON:0003220!2.90e-07!16;UBERON:0004208!2.90e-07!16;UBERON:0005156!6.34e-07!59;UBERON:0000990!6.34e-07!59;UBERON:0001007!7.42e-07!155;UBERON:0001555!7.42e-07!155;UBERON:0007026!7.42e-07!155;UBERON:0006555!9.05e-07!17;UBERON:0005103!9.05e-07!17;UBERON:0000083!9.05e-07!17;UBERON:0009201!9.05e-07!17;UBERON:0004819!9.05e-07!17;UBERON:0006553!9.05e-07!17;UBERON:0003074!9.05e-07!17;UBERON:0003060!9.05e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.61e-14;1!UBERON:0001052;3.85e-14;4!UBERON:0004907;1.66e-11;5!UBERON:0006955;6.57e-08;2!UBERON:0004909;6.57e-08;2!UBERON:0004801;6.57e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,2.11e-14,1;UBERON:0001052,3.37e-14,4;UBERON:0004907,1.50e-11,5;UBERON:0006955,7.03e-08,2;UBERON:0004801,7.03e-08,2;UBERON:0004909,7.52e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0.847168708148562,1.56869953835371,0,1.89992932007176,0,0,0.215915916102139,0,0.270946437543853,0,0.509752546090077,0,0.671624264166535,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,0,0,0.556543525114529,0,0,0,0,1.25966373927138,0,0,0,0.269605053441981,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,3.37596903244843,1.14262965711403,1.55488378577335,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.300646838828985,0.103688191397247,0,0,0,0,3.13070500632772,0,0.347119476670262,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.977756913674015,0.160317640503067,0.213452994739353,0,0.144090417154106,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,3.49487848582361,0.787831823072237,0.824158583811665,1.75249214020881,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.786818822024972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.342173675768659,0,0.533937062838473,0,0,0,0,0,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0.310525913752519,0,0.265841714557995,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0.694567422971502,0,0,0,0,0.530067437837643,0,0,2.81865670446741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,1.11542187833102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0,0,1.40136081656895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0.31020638566432,0,1.23040974977572,0,0.121917924982269,0,0,0,0.485710993059139,0.233939463462106,0,0.118920090777569,1.1294608203896,0,0.754814217833368,0,0.655678681511872,1.41095188908457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0.23806443146374,0,0,0.224263725161227,0.25458863311266,0.808468755832877,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@DCDC2 | |||
}} |
Latest revision as of 05:43, 17 September 2015
Short description: | p8@DCDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_DCDC2_5end |
Coexpression cluster: | C860_serous_mesothelioma_Renal_clear_colon_endometrial_hepatoblastoma |
Association with transcript: | 80bp_to_ENST00000378454, ENST00000451359, NM_016356, uc003ndx.2_5end |
EntrezGene: | DCDC2 |
HGNC: | 18141 |
UniProt: | Q9UHG0E9PGI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.11e-14 | 1 |
epithelial cell of large intestine | 5.74e-08 | 2 |
epithelial cell of cervix | 7.03e-08 | 2 |
seromucus secreting cell | 7.52e-08 | 2 |
epithelial cell | 2.25e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 2.11e-14 | 1 |
rectum | 3.37e-14 | 4 |
lower digestive tract | 1.50e-11 | 5 |
uterine epithelium | 7.03e-08 | 2 |
cervix epithelium | 7.03e-08 | 2 |
epithelium of gonad | 7.52e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.60e-27 | 2 |
ovary epithelial cancer | 2.11e-14 | 1 |
adenocarcinoma | 2.75e-13 | 25 |
female reproductive organ cancer | 2.86e-12 | 27 |
cell type cancer | 5.72e-12 | 143 |
reproductive organ cancer | 2.01e-11 | 29 |
carcinoma | 2.12e-11 | 106 |
gastrointestinal system cancer | 4.19e-09 | 14 |
cancer | 5.52e-08 | 235 |
disease of cellular proliferation | 8.74e-08 | 239 |
organ system cancer | 8.87e-07 | 137 |