FFCP PHASE1:Hg19::chr13:36050976..36050990,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26960 | |EntrezGene=26960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7648 | |HGNC=7648 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_uc010teg.1_5end | |association_with_transcript=10bp_to_uc010teg.1_5end | ||
|cluster_id=chr13:36050976..36050990,+ | |||
|coexpression_cluster_id=C699 | |||
|description=CAGE_peak_8_at_NBEA_5end | |description=CAGE_peak_8_at_NBEA_5end | ||
|id=chr13:36050976..36050990,+ | |id=chr13:36050976..36050990,+ | ||
|ontology_enrichment_celltype=CL:0000064!9.18e-19!3;CL:0005012!9.18e-19!3;CL:0000067!9.18e-19!3;CL:0002304!9.18e-19!3;CL:0000075!4.29e-16!27;CL:0000710!1.87e-13!20;CL:0000133!1.31e-09!59;CL:0000197!2.88e-09!6;CL:0000098!2.88e-09!6;CL:0002167!2.88e-09!6;CL:0002586!9.45e-09!3;CL:0002077!8.39e-08!33;CL:0000221!1.08e-07!71;CL:0000342!2.67e-07!1;CL:0002565!2.67e-07!1;CL:0002574!4.06e-07!1;CL:0000306!6.70e-07!4;CL:0002222!6.70e-07!4;CL:0002224!6.70e-07!4;CL:0000149!9.21e-07!4;CL:0000147!9.56e-07!14 | |ontology_enrichment_celltype=CL:0000064!9.18e-19!3;CL:0005012!9.18e-19!3;CL:0000067!9.18e-19!3;CL:0002304!9.18e-19!3;CL:0000075!4.29e-16!27;CL:0000710!1.87e-13!20;CL:0000133!1.31e-09!59;CL:0000197!2.88e-09!6;CL:0000098!2.88e-09!6;CL:0002167!2.88e-09!6;CL:0002586!9.45e-09!3;CL:0002077!8.39e-08!33;CL:0000221!1.08e-07!71;CL:0000342!2.67e-07!1;CL:0002565!2.67e-07!1;CL:0002574!4.06e-07!1;CL:0000306!6.70e-07!4;CL:0002222!6.70e-07!4;CL:0002224!6.70e-07!4;CL:0000149!9.21e-07!4;CL:0000147!9.56e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000064;4.87e-46;3!CL:0000067;4.87e-46;3!CL:0005012;4.87e-46;3!CL:0002304;4.87e-46;3!CL:0000333;6.37e-28;5!CL:0000342;1.93e-16;1!CL:0002565;1.93e-16;1!CL:0002321;9.47e-10;15!CL:0000075;2.11e-09;27!CL:0000710;1.85e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,4.17e-46,3;CL:0000067,4.17e-46,3;CL:0005012,4.17e-46,3;CL:0002304,4.17e-46,3;CL:0000342,2.25e-16,1;CL:0002565,2.25e-16,1;CL:0000133,8.03e-12,59;CL:0000221,1.16e-09,72;CL:0000075,2.06e-09,27;CL:0000710,1.81e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.93e-16;1!UBERON:0003852;1.93e-16;1!CL:0000221;1.64e-07;72 | |||
|ontology_enrichment_disease=DOID:169!1.25e-09!6 | |ontology_enrichment_disease=DOID:169!1.25e-09!6 | ||
|ontology_enrichment_disease_v019=DOID:169;2.13e-23;6!DOID:171;2.55e-14;10!DOID:3095;8.10e-07;22!DOID:2994;8.10e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.83e-23,6;DOID:171,2.33e-14,10;DOID:3095,7.78e-07,22;DOID:2994,7.78e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0007625!1.77e-33!11;UBERON:0000970!3.75e-28!20;UBERON:0002104!1.00e-26!21;UBERON:0001456!1.32e-26!21;UBERON:0000488!2.48e-24!4;UBERON:0000020!3.06e-24!23;UBERON:0000019!5.52e-24!19;UBERON:0000047!5.52e-24!19;UBERON:0004088!5.52e-24!19;UBERON:0003072!5.52e-24!19;UBERON:0003071!5.52e-24!19;UBERON:0004128!5.52e-24!19;UBERON:0001032!3.73e-23!24;UBERON:0004456!3.73e-23!24;UBERON:0001778!9.18e-19!3;UBERON:0001775!9.18e-19!3;UBERON:0001444!6.49e-18!48;UBERON:0002203!2.77e-16!6;UBERON:0001768!2.77e-16!6;UBERON:0000033!7.95e-16!123;UBERON:0005085!3.48e-15!29;UBERON:0001801!6.38e-15!14;UBERON:0000153!6.75e-15!129;UBERON:0007811!6.75e-15!129;UBERON:0003075!1.26e-13!86;UBERON:0007284!1.26e-13!86;UBERON:0004121!6.05e-13!169;UBERON:0002346!7.01e-13!90;UBERON:0000924!1.53e-12!173;UBERON:0006601!1.53e-12!173;UBERON:0004733!1.74e-11!12;UBERON:0002028!1.74e-11!12;UBERON:0007277!1.74e-11!12;UBERON:0000013!1.83e-11!5;UBERON:0002410!1.83e-11!5;UBERON:0000966!2.60e-11!5;UBERON:0005388!2.60e-11!5;UBERON:0001802!2.60e-11!5;UBERON:0004732!1.38e-10!13;UBERON:0000063!2.48e-10!97;UBERON:0002680!3.19e-10!9;UBERON:0001895!3.19e-10!9;UBERON:0010092!3.19e-10!9;UBERON:0003056!2.04e-09!61;UBERON:0003076!3.79e-09!15;UBERON:0003057!3.79e-09!15;UBERON:0002200!6.29e-09!11;UBERON:0006876!6.29e-09!11;UBERON:0000073!8.62e-09!94;UBERON:0001016!8.62e-09!94;UBERON:0001781!9.45e-09!3;UBERON:0001782!9.45e-09!3;UBERON:0005424!9.45e-09!3;UBERON:0000988!2.19e-08!3;UBERON:0002506!2.67e-07!1;UBERON:0001769!2.67e-07!1;UBERON:0005705!3.01e-07!1;UBERON:0008193!3.01e-07!1;UBERON:0002514!3.01e-07!1;UBERON:0003462!3.01e-07!1;UBERON:0008001!3.01e-07!1;UBERON:0007914!3.01e-07!1;UBERON:0003457!3.01e-07!1;UBERON:0009292!3.01e-07!1;UBERON:0007375!3.01e-07!1;UBERON:0003323!3.01e-07!1;UBERON:0002397!3.01e-07!1;UBERON:0001709!3.01e-07!1;UBERON:0004066!3.01e-07!1;UBERON:0002244!3.01e-07!1;UBERON:0005620!3.01e-07!1;UBERON:0004068!3.01e-07!1;UBERON:0004362!3.01e-07!1;UBERON:0010077!6.70e-07!4;UBERON:0005389!6.70e-07!4;UBERON:0000484!6.70e-07!4;UBERON:0002546!6.70e-07!4;UBERON:0000965!6.70e-07!4;UBERON:0001803!6.70e-07!4;UBERON:0003073!6.70e-07!4;UBERON:0005426!6.70e-07!4;UBERON:0002298!9.59e-07!8 | |ontology_enrichment_uberon=UBERON:0007625!1.77e-33!11;UBERON:0000970!3.75e-28!20;UBERON:0002104!1.00e-26!21;UBERON:0001456!1.32e-26!21;UBERON:0000488!2.48e-24!4;UBERON:0000020!3.06e-24!23;UBERON:0000019!5.52e-24!19;UBERON:0000047!5.52e-24!19;UBERON:0004088!5.52e-24!19;UBERON:0003072!5.52e-24!19;UBERON:0003071!5.52e-24!19;UBERON:0004128!5.52e-24!19;UBERON:0001032!3.73e-23!24;UBERON:0004456!3.73e-23!24;UBERON:0001778!9.18e-19!3;UBERON:0001775!9.18e-19!3;UBERON:0001444!6.49e-18!48;UBERON:0002203!2.77e-16!6;UBERON:0001768!2.77e-16!6;UBERON:0000033!7.95e-16!123;UBERON:0005085!3.48e-15!29;UBERON:0001801!6.38e-15!14;UBERON:0000153!6.75e-15!129;UBERON:0007811!6.75e-15!129;UBERON:0003075!1.26e-13!86;UBERON:0007284!1.26e-13!86;UBERON:0004121!6.05e-13!169;UBERON:0002346!7.01e-13!90;UBERON:0000924!1.53e-12!173;UBERON:0006601!1.53e-12!173;UBERON:0004733!1.74e-11!12;UBERON:0002028!1.74e-11!12;UBERON:0007277!1.74e-11!12;UBERON:0000013!1.83e-11!5;UBERON:0002410!1.83e-11!5;UBERON:0000966!2.60e-11!5;UBERON:0005388!2.60e-11!5;UBERON:0001802!2.60e-11!5;UBERON:0004732!1.38e-10!13;UBERON:0000063!2.48e-10!97;UBERON:0002680!3.19e-10!9;UBERON:0001895!3.19e-10!9;UBERON:0010092!3.19e-10!9;UBERON:0003056!2.04e-09!61;UBERON:0003076!3.79e-09!15;UBERON:0003057!3.79e-09!15;UBERON:0002200!6.29e-09!11;UBERON:0006876!6.29e-09!11;UBERON:0000073!8.62e-09!94;UBERON:0001016!8.62e-09!94;UBERON:0001781!9.45e-09!3;UBERON:0001782!9.45e-09!3;UBERON:0005424!9.45e-09!3;UBERON:0000988!2.19e-08!3;UBERON:0002506!2.67e-07!1;UBERON:0001769!2.67e-07!1;UBERON:0005705!3.01e-07!1;UBERON:0008193!3.01e-07!1;UBERON:0002514!3.01e-07!1;UBERON:0003462!3.01e-07!1;UBERON:0008001!3.01e-07!1;UBERON:0007914!3.01e-07!1;UBERON:0003457!3.01e-07!1;UBERON:0009292!3.01e-07!1;UBERON:0007375!3.01e-07!1;UBERON:0003323!3.01e-07!1;UBERON:0002397!3.01e-07!1;UBERON:0001709!3.01e-07!1;UBERON:0004066!3.01e-07!1;UBERON:0002244!3.01e-07!1;UBERON:0005620!3.01e-07!1;UBERON:0004068!3.01e-07!1;UBERON:0004362!3.01e-07!1;UBERON:0010077!6.70e-07!4;UBERON:0005389!6.70e-07!4;UBERON:0000484!6.70e-07!4;UBERON:0002546!6.70e-07!4;UBERON:0000965!6.70e-07!4;UBERON:0001803!6.70e-07!4;UBERON:0003073!6.70e-07!4;UBERON:0005426!6.70e-07!4;UBERON:0002298!9.59e-07!8 | ||
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|short_description=p8@NBEA | |short_description=p8@NBEA | ||
}} | }} |
Latest revision as of 05:15, 17 September 2015
Short description: | p8@NBEA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NBEA_5end |
Coexpression cluster: | C699_medulloblastoma_Lens_neuroblastoma_Ciliary_eye_small_cerebellum |
Association with transcript: | 10bp_to_uc010teg.1_5end |
EntrezGene: | NBEA |
HGNC: | 7648 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 4.17e-46 | 3 |
ciliated epithelial cell | 4.17e-46 | 3 |
multi-ciliated epithelial cell | 4.17e-46 | 3 |
non-pigmented ciliary epithelial cell | 4.17e-46 | 3 |
pigment cell (sensu Vertebrata) | 2.25e-16 | 1 |
iris pigment epithelial cell | 2.25e-16 | 1 |
neurectodermal cell | 8.03e-12 | 59 |
ectodermal cell | 1.16e-09 | 72 |
columnar/cuboidal epithelial cell | 2.06e-09 | 27 |
neurecto-epithelial cell | 1.81e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.83e-23 | 6 |
neuroectodermal tumor | 2.33e-14 | 10 |
germ cell and embryonal cancer | 7.78e-07 | 22 |
germ cell cancer | 7.78e-07 | 22 |