FFCP PHASE1:Hg19::chr11:1946293..1946319,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7140 | |EntrezGene=7140 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11950 | |HGNC=11950 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=145bp_to_ENST00000492075_5end | |association_with_transcript=145bp_to_ENST00000492075_5end | ||
|cluster_id=chr11:1946293..1946319,+ | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_11_at_TNNT3_5end | |description=CAGE_peak_11_at_TNNT3_5end | ||
|id=chr11:1946293..1946319,+ | |id=chr11:1946293..1946319,+ | ||
|ontology_enrichment_celltype=CL:0000349!5.13e-14!3;CL:0002577!5.13e-14!3;CL:0002541!2.76e-13!3;CL:0002536!1.05e-09!2;CL:0002537!1.21e-08!5 | |ontology_enrichment_celltype=CL:0000349!5.13e-14!3;CL:0002577!5.13e-14!3;CL:0002541!2.76e-13!3;CL:0002536!1.05e-09!2;CL:0002537!1.21e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.23e-79;19!CL:0002577;1.41e-46;3!CL:0002536;5.09e-31;2!CL:0002537;1.44e-28;5!CL:0002541;1.76e-21;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.53e-79,19;CL:0002577,1.41e-46,3;CL:0002536,6.41e-31,2;CL:0002537,1.44e-28,5;CL:0002541,1.76e-21,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.47e-42!14;UBERON:0000158!3.47e-42!14;UBERON:0003124!3.03e-29!7;UBERON:0000478!1.85e-23!24;UBERON:0001987!1.01e-17!4;UBERON:0004340!1.01e-17!4;UBERON:0000305!1.06e-15!7;UBERON:0004923!2.48e-15!57;UBERON:0004871!1.08e-13!8;UBERON:0000476!2.76e-13!3;UBERON:0000920!2.76e-13!3;UBERON:0004175!2.13e-09!25;UBERON:0000341!3.67e-09!2 | |ontology_enrichment_uberon=UBERON:0005631!3.47e-42!14;UBERON:0000158!3.47e-42!14;UBERON:0003124!3.03e-29!7;UBERON:0000478!1.85e-23!24;UBERON:0001987!1.01e-17!4;UBERON:0004340!1.01e-17!4;UBERON:0000305!1.06e-15!7;UBERON:0004923!2.48e-15!57;UBERON:0004871!1.08e-13!8;UBERON:0000476!2.76e-13!3;UBERON:0000920!2.76e-13!3;UBERON:0004175!2.13e-09!25;UBERON:0000341!3.67e-09!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.85e-74;10!UBERON:0000158;2.85e-74;10!UBERON:0000478;1.00e-62;24!UBERON:0000305;1.52e-54;7!UBERON:0001987;3.77e-35;4!UBERON:0003124;1.76e-21;3!UBERON:0000920;1.76e-21;3!UBERON:0004923;1.24e-09;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.87e-108,14;UBERON:0000158,7.87e-108,14;UBERON:0000478,1.11e-62,24;UBERON:0003124,1.15e-54,7;UBERON:0000305,1.80e-54,7;UBERON:0004871,1.06e-47,8;UBERON:0001987,3.77e-35,4;UBERON:0004340,3.77e-35,4;UBERON:0004923,2.44e-22,66;UBERON:0000920,1.76e-21,3;UBERON:0000995,3.35e-07,21;UBERON:0005795,6.75e-07,22;UBERON:0003975,6.75e-07,22 | |||
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| ||
|short_description=p11@TNNT3 | |short_description=p11@TNNT3 | ||
}} | }} |
Latest revision as of 04:51, 17 September 2015
Short description: | p11@TNNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TNNT3_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 145bp_to_ENST00000492075_5end |
EntrezGene: | TNNT3 |
HGNC: | 11950 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.53e-79 | 19 |
placental epithelial cell | 1.41e-46 | 3 |
amniotic epithelial cell | 6.41e-31 | 2 |
amnion mesenchymal stem cell | 1.44e-28 | 5 |
chorionic membrane mesenchymal stem cell | 1.76e-21 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.87e-108 | 14 |
membranous layer | 7.87e-108 | 14 |
extraembryonic structure | 1.11e-62 | 24 |
chorion | 1.15e-54 | 7 |
amnion | 1.80e-54 | 7 |
somatic layer of lateral plate mesoderm | 1.06e-47 | 8 |
placenta | 3.77e-35 | 4 |
allantois | 3.77e-35 | 4 |
organ component layer | 2.44e-22 | 66 |
egg chorion | 1.76e-21 | 3 |
uterus | 3.35e-07 | 21 |
embryonic uterus | 6.75e-07 | 22 |
internal female genitalia | 6.75e-07 | 22 |