FFCP PHASE1:Hg19::chr4:187187098..187187127,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2160 | |EntrezGene=2160 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3529 | |HGNC=3529 | ||
|TSSclassifier=strong | |||
|UniProt=E9PGP2,P03951 | |UniProt=E9PGP2,P03951 | ||
|association_with_transcript=0bp_to_ENST00000264692,ENST00000403665,NM_000128,uc003iyz.2,uc003iza.1_5end | |association_with_transcript=0bp_to_ENST00000264692,ENST00000403665,NM_000128,uc003iyz.2,uc003iza.1_5end | ||
|cluster_id=chr4:187187098..187187127,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_F11_5end | |description=CAGE_peak_2_at_F11_5end | ||
|id=chr4:187187098..187187127,+ | |id=chr4:187187098..187187127,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.69e-27!12;CL:0000417!2.69e-27!12;CL:0000668!2.69e-27!12;CL:0000414!2.69e-27!12;CL:0000412!2.69e-27!12;CL:0000182!2.69e-27!12 | |ontology_enrichment_celltype=CL:0000181!2.69e-27!12;CL:0000417!2.69e-27!12;CL:0000668!2.69e-27!12;CL:0000414!2.69e-27!12;CL:0000412!2.69e-27!12;CL:0000182!2.69e-27!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.89e-35;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.89e-35,12;CL:0000223,5.26e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.16e-37;11!UBERON:0009497;7.63e-32;13!UBERON:0003104;1.99e-17;31!UBERON:0006242;1.09e-12;1!UBERON:0001041;1.01e-09;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;7.35e-39;19!UBERON:0006925;7.35e-39;19!UBERON:0002423;6.04e-37;25!UBERON:0002365;1.12e-22;31!UBERON:0002330;1.12e-22;31!UBERON:0002368;5.50e-20;33!UBERON:0000949;1.51e-17;43!UBERON:0005172;8.08e-13;52!UBERON:0005173;8.08e-13;52!UBERON:0002108;2.19e-10;4!UBERON:0002417;3.38e-10;58!UBERON:0000916;3.38e-10;58!UBERON:0001007;2.50e-09;81!UBERON:0002530;1.09e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.35e-39,19;UBERON:0006925,7.35e-39,19;UBERON:0008836,7.35e-39,19;UBERON:0009497,6.04e-37,25;UBERON:0000015,6.04e-37,25;UBERON:0002423,6.04e-37,25;UBERON:0006235,6.04e-37,25;UBERON:0004161,6.04e-37,25;UBERON:0008835,1.81e-33,22;UBERON:0003894,1.81e-33,22;UBERON:0009854,5.52e-32,23;UBERON:0007499,2.28e-29,25;UBERON:0009856,3.27e-28,26;UBERON:0002365,1.52e-23,31;UBERON:0002330,1.52e-23,31;UBERON:0002368,9.13e-21,35;UBERON:0005172,1.82e-20,54;UBERON:0005173,1.82e-20,54;UBERON:0000949,3.73e-20,45;UBERON:0002417,2.67e-18,60;UBERON:0000916,2.67e-18,60;UBERON:0003929,1.38e-16,54;UBERON:0005177,1.31e-12,101;UBERON:0002530,5.50e-12,59;UBERON:0005911,1.47e-10,82;UBERON:0004921,1.59e-10,118;UBERON:0002108,2.14e-10,4;UBERON:0001007,5.72e-10,145;UBERON:0001555,5.72e-10,145;UBERON:0007026,5.72e-10,145;UBERON:0009569,3.25e-09,112;UBERON:0004119,6.95e-09,160;UBERON:0000925,6.95e-09,160;UBERON:0006595,6.95e-09,160;UBERON:0001041,7.62e-08,87;UBERON:0003914,4.56e-07,117;UBERON:0005256,9.90e-07,122 | |||
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|short_description=p2@F11 | |short_description=p2@F11 | ||
}} | }} |
Latest revision as of 04:51, 17 September 2015
Short description: | p2@F11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_F11_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000264692, ENST00000403665, NM_000128, uc003iyz.2, uc003iza.1_5end |
EntrezGene: | F11 |
HGNC: | 3529 |
UniProt: | E9PGP2P03951 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.89e-35 | 12 |
endodermal cell | 5.26e-07 | 58 |