FFCP PHASE1:Hg19::chr11:1946152..1946161,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:1946152..1946161,+ to FFCP PHASE1:Hg19::chr11:1946152..1946161,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7140 | |EntrezGene=7140 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11950 | |HGNC=11950 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_ENST00000492075_5end | |||
|cluster_id=chr11:1946152..1946161,+ | |||
|coexpression_cluster_id=C393 | |||
|description=CAGE_peak_12_at_TNNT3_5end | |||
|id=chr11:1946152..1946161,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.85e-17!3;CL:0002536!2.23e-11!2;CL:0002537!6.76e-11!5;CL:0000349!1.92e-08!3;CL:0002577!1.92e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;6.51e-51;19!CL:0002537;1.20e-28;5!CL:0002541;1.59e-21;3!CL:0002577;2.53e-21;3!CL:0000134;1.23e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.73e-51,19;CL:0002537,1.32e-28,5;CL:0002541,1.29e-21,3;CL:0002577,2.67e-21,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.79e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.34e-45!14;UBERON:0000158!1.34e-45!14;UBERON:0000478!3.90e-36!24;UBERON:0003124!4.27e-28!7;UBERON:0000305!1.53e-19!7;UBERON:0004923!4.87e-18!57;UBERON:0000476!1.85e-17!3;UBERON:0000920!1.85e-17!3;UBERON:0004871!4.50e-17!8;UBERON:0001987!5.00e-13!4;UBERON:0004340!5.00e-13!4;UBERON:0001255!1.18e-11!2;UBERON:0001556!1.18e-11!2;UBERON:0000344!5.62e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;9.31e-51;24!UBERON:0005631;1.09e-38;10!UBERON:0000158;1.09e-38;10!UBERON:0003124;1.59e-21;3!UBERON:0000920;1.59e-21;3!UBERON:0000305;1.12e-20;7!UBERON:0001987;2.96e-16;4!UBERON:0000341;8.09e-09;2!UBERON:0002331;5.85e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.44e-53,14;UBERON:0000158,2.44e-53,14;UBERON:0000478,9.31e-51,24;UBERON:0003124,2.57e-35,7;UBERON:0000920,1.29e-21,3;UBERON:0000305,1.20e-20,7;UBERON:0004871,3.72e-18,8;UBERON:0001987,3.07e-16,4;UBERON:0004340,3.07e-16,4;UBERON:0004923,4.91e-11,66;UBERON:0000341,8.09e-09,2;UBERON:0002331,5.94e-07,10;UBERON:0000358,5.94e-07,10;UBERON:0000307,5.94e-07,10;UBERON:0000091,5.94e-07,10;UBERON:0000087,5.94e-07,10;UBERON:0007010,5.94e-07,10;UBERON:0007806,5.94e-07,10;UBERON:0008780,5.94e-07,10;UBERON:0005728,5.94e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12189300012382,0,4.5358543999452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01363417949149,17.8178808499583,5.22173193568695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0.0897576444097721,0,5.42301971544263,0.549585560411174,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,1.9980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,3.64353812307926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,3.57107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,1.42838658878244,0,0,0,0,0,0,0,0.0673520530145875,0,0.99798106963804,0.407016343054873,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12189300012382,0,4.5358543999452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01363417949149,17.8178808499583,5.22173193568695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0.0897576444097721,0,5.42301971544263,0.549585560411174,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,1.9980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,3.64353812307926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,3.57107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,1.42838658878244,0,0,0,0,0,0,0,0.0673520530145875,0,0.99798106963804,0.407016343054873,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p12@TNNT3 | |||
}} | }} |
Latest revision as of 04:51, 17 September 2015
Short description: | p12@TNNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TNNT3_5end |
Coexpression cluster: | C393_amniotic_Placental_Amniotic_clear_Basophils_pharyngeal_tonsil |
Association with transcript: | 4bp_to_ENST00000492075_5end |
EntrezGene: | TNNT3 |
HGNC: | 11950 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.73e-51 | 19 |
amnion mesenchymal stem cell | 1.32e-28 | 5 |
chorionic membrane mesenchymal stem cell | 1.29e-21 | 3 |
placental epithelial cell | 2.67e-21 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.44e-53 | 14 |
membranous layer | 2.44e-53 | 14 |
extraembryonic structure | 9.31e-51 | 24 |
chorion | 2.57e-35 | 7 |
egg chorion | 1.29e-21 | 3 |
amnion | 1.20e-20 | 7 |
somatic layer of lateral plate mesoderm | 3.72e-18 | 8 |
placenta | 3.07e-16 | 4 |
allantois | 3.07e-16 | 4 |
organ component layer | 4.91e-11 | 66 |
throat | 8.09e-09 | 2 |
umbilical cord | 5.94e-07 | 10 |
blastocyst | 5.94e-07 | 10 |
blastula | 5.94e-07 | 10 |
bilaminar disc | 5.94e-07 | 10 |
inner cell mass | 5.94e-07 | 10 |
cleaving embryo | 5.94e-07 | 10 |
connecting stalk | 5.94e-07 | 10 |
inner cell mass derived epiblast | 5.94e-07 | 10 |
extraembryonic mesoderm | 5.94e-07 | 10 |