FFCP PHASE1:Hg19::chr7:150554973..150554993,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=80 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-27bp_to_ENST00000480582_5end | |||
|cluster_id=chr7:150554973..150554993,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_3_at_ABP1_5end | |||
|id=chr7:150554973..150554993,+ | |||
|ontology_enrichment_celltype=CL:0002541!2.89e-23!3;CL:0000453!4.89e-14!5;CL:0002178!4.82e-10!3;CL:0000313!1.37e-08!1;CL:0000990!5.21e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002541;4.73e-47;3!CL:0000453;3.04e-28;5!CL:0000313;2.43e-16;1!CL:0000990;5.16e-16;8!CL:0000451;3.21e-13;10!CL:0000159;7.79e-09;2!CL:0000349;5.61e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.73e-47,3;CL:0000453,3.04e-28,5;CL:0000313,3.07e-16,1;CL:0000990,5.16e-16,8;CL:0000451,3.21e-13,10;CL:0000159,8.74e-09,2;CL:0000349,5.61e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.53e-16;1 | |||
|ontology_enrichment_disease=DOID:2152!1.37e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;2.43e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,3.07e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!2.89e-23!3;UBERON:0000920!2.89e-23!3;UBERON:0003124!2.17e-17!7;UBERON:0005631!3.78e-13!14;UBERON:0000158!3.78e-13!14;UBERON:0005409!1.51e-11!35;UBERON:0000160!8.42e-09!27;UBERON:0004911!1.37e-08!1;UBERON:0001301!2.64e-08!1;UBERON:0000478!1.42e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.73e-47;3!UBERON:0000920;4.73e-47;3!UBERON:0002108;1.16e-27;4!UBERON:0004911;2.43e-16;1!UBERON:0005631;1.22e-14;10!UBERON:0000158;1.22e-14;10!UBERON:0000160;1.07e-13;17!UBERON:0005409;8.70e-11;22!UBERON:0000478;1.26e-10;24!UBERON:0004909;7.79e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.73e-47,3;UBERON:0003124,1.51e-35,7;UBERON:0002108,1.01e-27,4;UBERON:0005631,5.39e-18,14;UBERON:0000158,5.39e-18,14;UBERON:0004911,3.07e-16,1;UBERON:0000160,1.04e-13,17;UBERON:0000478,1.25e-10,24;UBERON:0005409,1.38e-09,25;UBERON:0004909,8.74e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.8890359516895,6.41183153813036,49.572234169733,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630445658393585,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.18413297125432,5.58032329316125,3.76200406788442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7497734750418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11855431797792,0.098150233615243,0,0,0,0,0,0.233939463462106,0,0,0,0,0,1.46630900405095,1.96703604453562,18.3423745580994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@ABP1 | |||
}} |
Latest revision as of 04:26, 17 September 2015
Short description: | p3@ABP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ABP1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -27bp_to_ENST00000480582_5end |
EntrezGene: | ABP1 |
HGNC: | 80 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.73e-47 | 3 |
Langerhans cell | 3.04e-28 | 5 |
serous secreting cell | 3.07e-16 | 1 |
conventional dendritic cell | 5.16e-16 | 8 |
dendritic cell | 3.21e-13 | 10 |
seromucus secreting cell | 8.74e-09 | 2 |
extraembryonic cell | 5.61e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.73e-47 | 3 |
chorion | 1.51e-35 | 7 |
small intestine | 1.01e-27 | 4 |
extraembryonic membrane | 5.39e-18 | 14 |
membranous layer | 5.39e-18 | 14 |
epithelium of female gonad | 3.07e-16 | 1 |
intestine | 1.04e-13 | 17 |
extraembryonic structure | 1.25e-10 | 24 |
gastrointestinal system | 1.38e-09 | 25 |
epithelium of gonad | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 3.07e-16 | 1 |