FFCP PHASE1:Hg19::chr7:150553711..150553733,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26 | |EntrezGene=26 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=80 | |HGNC=80 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=152bp_to_CU680774,JF432306_5end | |association_with_transcript=152bp_to_CU680774,JF432306_5end | ||
|cluster_id=chr7:150553711..150553733,+ | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_5_at_ABP1_5end | |description=CAGE_peak_5_at_ABP1_5end | ||
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|ontology_enrichment_celltype=CL:0002541!3.70e-20!3;CL:0000453!3.84e-12!5;CL:0002178!9.28e-09!3;CL:0000313!2.66e-07!1;CL:0000990!6.17e-07!8 | |ontology_enrichment_celltype=CL:0002541!3.70e-20!3;CL:0000453!3.84e-12!5;CL:0002178!9.28e-09!3;CL:0000313!2.66e-07!1;CL:0000990!6.17e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002541;3.46e-55;3!CL:0000453;5.36e-33;5!CL:0000990;1.10e-18;8!CL:0000349;1.17e-15;19!CL:0000451;2.04e-15;10 | |ontology_enrichment_celltype_v019=CL:0002541;3.46e-55;3!CL:0000453;5.36e-33;5!CL:0000990;1.10e-18;8!CL:0000349;1.17e-15;19!CL:0000451;2.04e-15;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.47e-55,3;CL:0000453,5.36e-33,5;CL:0000990,1.10e-18,8;CL:0000349,1.24e-15,19;CL:0000451,2.04e-15,10 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.28e-19;1 | |ontology_enrichment_development_v019=UBERON:0003124;4.28e-19;1 | ||
|ontology_enrichment_disease=DOID:3119!1.37e-10!14;DOID:2152!2.66e-07!1 | |ontology_enrichment_disease=DOID:3119!1.37e-10!14;DOID:2152!2.66e-07!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!3.70e-20!3;UBERON:0000920!3.70e-20!3;UBERON:0003124!5.43e-15!7;UBERON:0005409!3.69e-12!35;UBERON:0005631!2.69e-11!14;UBERON:0000158!2.69e-11!14;UBERON:0000160!7.21e-10!27;UBERON:0001301!1.83e-07!1;UBERON:0004911!2.66e-07!1 | |ontology_enrichment_uberon=UBERON:0000476!3.70e-20!3;UBERON:0000920!3.70e-20!3;UBERON:0003124!5.43e-15!7;UBERON:0005409!3.69e-12!35;UBERON:0005631!2.69e-11!14;UBERON:0000158!2.69e-11!14;UBERON:0000160!7.21e-10!27;UBERON:0001301!1.83e-07!1;UBERON:0004911!2.66e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.46e-55;3!UBERON:0000920;3.46e-55;3!UBERON:0005631;2.45e-29;10!UBERON:0000158;2.45e-29;10!UBERON:0000478;6.30e-19;24 | |ontology_enrichment_uberon_v019=UBERON:0003124;3.46e-55;3!UBERON:0000920;3.46e-55;3!UBERON:0005631;2.45e-29;10!UBERON:0000158;2.45e-29;10!UBERON:0000478;6.30e-19;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.47e-55,3;UBERON:0003124,1.09e-41,7;UBERON:0005631,3.00e-32,14;UBERON:0000158,3.00e-32,14;UBERON:0000478,6.54e-19,24;UBERON:0004923,6.42e-07,66 | |||
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|short_description=p5@ABP1 | |short_description=p5@ABP1 | ||
}} | }} |
Latest revision as of 04:22, 17 September 2015
Short description: | p5@ABP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ABP1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 152bp_to_CU680774, JF432306_5end |
EntrezGene: | ABP1 |
HGNC: | 80 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.47e-55 | 3 |
Langerhans cell | 5.36e-33 | 5 |
conventional dendritic cell | 1.10e-18 | 8 |
extraembryonic cell | 1.24e-15 | 19 |
dendritic cell | 2.04e-15 | 10 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.47e-55 | 3 |
chorion | 1.09e-41 | 7 |
extraembryonic membrane | 3.00e-32 | 14 |
membranous layer | 3.00e-32 | 14 |
extraembryonic structure | 6.54e-19 | 24 |
organ component layer | 6.42e-07 | 66 |