FFCP PHASE1:Hg19::chr7:150553643..150553665,+: Difference between revisions
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|id=chr7:150553643..150553665,+
|short_description=p4@ABP1
|description=CAGE_peak_4_at_ABP1_5end
|association_with_transcript=84bp_to_CU680774,JF432306_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26 | |EntrezGene=26 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=80 | |HGNC=80 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=84bp_to_CU680774,JF432306_5end | |||
|cluster_id=chr7:150553643..150553665,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_4_at_ABP1_5end | |||
|id=chr7:150553643..150553665,+ | |||
|ontology_enrichment_celltype=CL:0002541!5.79e-24!3;CL:0000453!1.63e-14!5;CL:0000313!1.05e-08!1;CL:0000990!2.80e-08!8;CL:0000451!7.50e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.30e-60;3!CL:0000453;3.45e-36;5!CL:0000990;1.79e-20;8!CL:0000349;3.84e-17;19!CL:0000451;6.90e-17;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.65e-60,3;CL:0000453,3.25e-36,5;CL:0000990,1.73e-20,8;CL:0000349,3.93e-17,19;CL:0000451,6.71e-17,10 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.53e-21;1 | |||
|ontology_enrichment_disease=DOID:2152!1.05e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!5.79e-24!3;UBERON:0000920!5.79e-24!3;UBERON:0003124!6.41e-18!7;UBERON:0005631!1.21e-13!14;UBERON:0000158!1.21e-13!14;UBERON:0000989!9.74e-09!1;UBERON:0008811!9.74e-09!1;UBERON:0006258!9.74e-09!1;UBERON:0005876!9.74e-09!1;UBERON:0004874!9.74e-09!1;UBERON:0004911!1.05e-08!1;UBERON:0001301!1.32e-08!1;UBERON:0000478!7.23e-08!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.30e-60;3!UBERON:0000920;3.30e-60;3!UBERON:0005631;4.15e-32;10!UBERON:0000158;4.15e-32;10!UBERON:0000478;9.18e-21;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.65e-60,3;UBERON:0003124,1.58e-45,7;UBERON:0005631,2.24e-35,14;UBERON:0000158,2.24e-35,14;UBERON:0000478,9.18e-21,24;UBERON:0004923,1.24e-07,66 | |||
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|short_description=p4@ABP1 | |||
}} | }} |
Latest revision as of 04:21, 17 September 2015
Short description: | p4@ABP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ABP1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 84bp_to_CU680774, JF432306_5end |
EntrezGene: | ABP1 |
HGNC: | 80 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.65e-60 | 3 |
Langerhans cell | 3.25e-36 | 5 |
conventional dendritic cell | 1.73e-20 | 8 |
extraembryonic cell | 3.93e-17 | 19 |
dendritic cell | 6.71e-17 | 10 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.65e-60 | 3 |
chorion | 1.58e-45 | 7 |
extraembryonic membrane | 2.24e-35 | 14 |
membranous layer | 2.24e-35 | 14 |
extraembryonic structure | 9.18e-21 | 24 |
organ component layer | 1.24e-07 | 66 |