FFCP PHASE1:Hg19::chr1:26147116..26147127,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=646471 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt=Q96DR3 | |||
|association_with_transcript=160bp_to_AK054768_5end | |||
|cluster_id=chr1:26147116..26147127,- | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_1_at_LOC646471_5end | |||
|id=chr1:26147116..26147127,- | |||
|ontology_enrichment_celltype=CL:0002087!3.76e-16!119;CL:0000738!1.55e-15!140;CL:0000838!4.48e-15!52;CL:0000542!1.00e-14!53;CL:0000051!1.00e-14!53;CL:0000623!2.20e-14!3;CL:0000825!2.20e-14!3;CL:0000842!8.40e-14!3;CL:0002031!2.14e-12!124;CL:0000624!9.46e-12!6;CL:0000037!1.76e-11!172;CL:0000566!1.76e-11!172;CL:0000791!4.34e-11!18;CL:0000789!4.34e-11!18;CL:0002420!4.34e-11!18;CL:0002419!4.34e-11!18;CL:0000790!4.34e-11!18;CL:0000988!1.64e-10!182;CL:0000224!1.84e-10!4;CL:0000084!7.28e-10!25;CL:0000827!7.28e-10!25;CL:0002032!5.51e-09!165;CL:0000837!5.51e-09!165;CL:0000080!4.21e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000623;8.78e-67;3!CL:0000625;9.49e-19;11!CL:0000791;9.76e-12;18!CL:0000789;9.76e-12;18!CL:0002419;9.76e-12;18!CL:0000542;3.61e-09;53!CL:0000084;1.25e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,9.82e-67,3;CL:0000825,9.82e-67,3;CL:0000625,9.20e-19,11;CL:0000838,2.30e-15,52;CL:0000542,4.48e-15,53;CL:0000051,4.48e-15,53;CL:0000791,9.59e-12,18;CL:0000789,9.59e-12,18;CL:0002420,9.59e-12,18;CL:0002419,9.59e-12,18;CL:0000790,9.59e-12,18;CL:0002087,3.29e-09,115;CL:0002031,8.06e-09,120;CL:0000084,1.24e-08,25;CL:0000827,1.24e-08,25;CL:0000738,9.19e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000790;9.76e-12;18!CL:0000051;3.61e-09;53!UBERON:0006215;1.40e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;5.13e-23;1!UBERON:0000026;5.13e-23;1!UBERON:0008784;5.13e-23;1!UBERON:0006058;5.13e-23;1!UBERON:0003663;5.13e-23;1!UBERON:0004256;5.13e-23;1!UBERON:0004708;5.13e-23;1!UBERON:0002101;5.13e-23;1!UBERON:0004709;5.13e-23;1!UBERON:0002529;5.13e-23;1!UBERON:0010538;5.13e-23;1!UBERON:0003661;5.13e-23;1!UBERON:0010890;5.13e-23;1!UBERON:0002471;5.13e-23;1!UBERON:0001383;5.13e-23;1!UBERON:0010758;5.13e-23;1!UBERON:0010707;5.13e-23;1!UBERON:0000978;5.13e-23;1!UBERON:0002103;5.13e-23;1!UBERON:0001665;5.13e-23;1!UBERON:0003823;5.13e-23;1!UBERON:0000154;5.13e-23;1!UBERON:0010709;5.13e-23;1!UBERON:0005090;3.24e-12;2!UBERON:0001630;3.24e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,5.13e-23,1;UBERON:0001389,5.13e-23,1;UBERON:0000026,5.13e-23,1;UBERON:0008784,5.13e-23,1;UBERON:0006058,5.13e-23,1;UBERON:0003663,5.13e-23,1;UBERON:0004256,5.13e-23,1;UBERON:0004708,5.13e-23,1;UBERON:0002101,5.13e-23,1;UBERON:0004709,5.13e-23,1;UBERON:0002529,5.13e-23,1;UBERON:0010538,5.13e-23,1;UBERON:0003661,5.13e-23,1;UBERON:0010890,5.13e-23,1;UBERON:0002471,5.13e-23,1;UBERON:0001383,5.13e-23,1;UBERON:0004357,5.13e-23,1;UBERON:0004347,5.13e-23,1;UBERON:0005420,5.13e-23,1;UBERON:0005732,5.13e-23,1;UBERON:0010758,5.13e-23,1;UBERON:0010707,5.13e-23,1;UBERON:0000978,5.13e-23,1;UBERON:0002103,5.13e-23,1;UBERON:0001665,5.13e-23,1;UBERON:0003823,5.13e-23,1;UBERON:0000154,5.13e-23,1;UBERON:0010709,5.13e-23,1;UBERON:0005733,5.13e-23,1;UBERON:0005730,5.13e-23,1;UBERON:0005090,3.24e-12,2;UBERON:0001630,3.24e-12,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.601633342410425,1.08505435357926,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0.786839080455332,0.393010762749165,0.822405995998037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0,0,2.21767417547206,3.7441627409691,2.75166367377318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56139988262505,4.74380664690938,3.7219480521127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0.144269212976445,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@LOC646471 | |||
}} |
Latest revision as of 03:54, 17 September 2015
Short description: | p1@LOC646471 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC646471_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 160bp_to_AK054768_5end |
EntrezGene: | LOC646471 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 9.82e-67 | 3 |
pro-NK cell | 9.82e-67 | 3 |
CD8-positive, alpha-beta T cell | 9.20e-19 | 11 |
lymphoid lineage restricted progenitor cell | 2.30e-15 | 52 |
lymphocyte | 4.48e-15 | 53 |
common lymphoid progenitor | 4.48e-15 | 53 |
mature alpha-beta T cell | 9.59e-12 | 18 |
alpha-beta T cell | 9.59e-12 | 18 |
immature T cell | 9.59e-12 | 18 |
mature T cell | 9.59e-12 | 18 |
immature alpha-beta T cell | 9.59e-12 | 18 |
nongranular leukocyte | 3.29e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.06e-09 | 120 |
T cell | 1.24e-08 | 25 |
pro-T cell | 1.24e-08 | 25 |
leukocyte | 9.19e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 5.13e-23 | 1 |
soleus muscle | 5.13e-23 | 1 |
appendage | 5.13e-23 | 1 |
lower limb segment | 5.13e-23 | 1 |
multi-limb segment region | 5.13e-23 | 1 |
hindlimb muscle | 5.13e-23 | 1 |
hindlimb zeugopod muscle | 5.13e-23 | 1 |
paired limb/fin | 5.13e-23 | 1 |
limb | 5.13e-23 | 1 |
pelvic appendage | 5.13e-23 | 1 |
limb segment | 5.13e-23 | 1 |
paired limb/fin segment | 5.13e-23 | 1 |
limb muscle | 5.13e-23 | 1 |
pelvic complex muscle | 5.13e-23 | 1 |
zeugopod | 5.13e-23 | 1 |
muscle of leg | 5.13e-23 | 1 |
paired limb/fin bud | 5.13e-23 | 1 |
limb bud | 5.13e-23 | 1 |
pelvic appendage bud | 5.13e-23 | 1 |
limb/fin field | 5.13e-23 | 1 |
subdivision of organism along appendicular axis | 5.13e-23 | 1 |
appendage girdle complex | 5.13e-23 | 1 |
leg | 5.13e-23 | 1 |
hindlimb | 5.13e-23 | 1 |
triceps surae | 5.13e-23 | 1 |
hindlimb zeugopod | 5.13e-23 | 1 |
posterior region of body | 5.13e-23 | 1 |
pelvic complex | 5.13e-23 | 1 |
limb field | 5.13e-23 | 1 |
hindlimb/pelvic fin field | 5.13e-23 | 1 |
muscle structure | 3.24e-12 | 2 |
muscle organ | 3.24e-12 | 2 |