FFCP PHASE1:Hg19::chr1:152386732..152386745,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=49860 | |EntrezGene=49860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1230 | |HGNC=1230 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBG3,B4DQ53 | |UniProt=Q9UBG3,B4DQ53 | ||
|association_with_transcript=0bp_to_ENST00000271835,ENST00000451038_5end | |association_with_transcript=0bp_to_ENST00000271835,ENST00000451038_5end | ||
|cluster_id=chr1:152386732..152386745,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_1_at_CRNN_5end | |description=CAGE_peak_1_at_CRNN_5end | ||
|id=chr1:152386732..152386745,- | |id=chr1:152386732..152386745,- | ||
|ontology_enrichment_celltype=CL:0002076!4.15e-16!43;CL:0002368!2.16e-15!13;CL:0000223!1.85e-10!59;CL:0002623!2.23e-09!3;CL:0002328!5.32e-09!3;CL:0002621!5.77e-09!3;CL:0002202!1.56e-07!9;CL:0002632!1.56e-07!9;CL:0002251!3.18e-07!21 | |ontology_enrichment_celltype=CL:0002076!4.15e-16!43;CL:0002368!2.16e-15!13;CL:0000223!1.85e-10!59;CL:0002623!2.23e-09!3;CL:0002328!5.32e-09!3;CL:0002621!5.77e-09!3;CL:0002202!1.56e-07!9;CL:0002632!1.56e-07!9;CL:0002251!3.18e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.79e-22;42!CL:0002368;3.74e-18;13!CL:0002623;1.73e-16;3!CL:0002328;8.01e-16;3!CL:0002621;9.11e-16;3!CL:0002251;3.45e-15;20!CL:0002202;5.38e-14;9!CL:0002632;5.38e-14;9!CL:0000575;5.10e-11;2!CL:0000622;4.32e-10;5!CL:0000154;1.75e-08;6!CL:0000307;8.62e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.40e-27,42;CL:0000223,7.66e-19,58;CL:0002368,4.45e-18,13;CL:0002623,1.69e-16,3;CL:0002328,8.88e-16,3;CL:0002621,1.04e-15,3;CL:0002251,3.41e-15,20;CL:0002202,6.27e-14,9;CL:0002632,6.27e-14,9;CL:0000575,5.23e-11,2;CL:0000622,4.25e-10,5;CL:0000154,1.73e-08,6;CL:0000068,9.72e-08,3;CL:0000069,9.72e-08,3;CL:0000307,9.72e-08,3;CL:0000377,9.72e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000223;4.46e-11;58!CL:0000377;8.62e-08;3!UBERON:0009143;5.58e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!2.62e-18!72;UBERON:0000065!3.59e-13!53;UBERON:0000166!9.02e-12!21;UBERON:0004119!6.49e-11!169;UBERON:0000925!6.49e-11!169;UBERON:0006595!6.49e-11!169;UBERON:0000153!1.28e-10!129;UBERON:0007811!1.28e-10!129;UBERON:0000165!4.96e-10!28;UBERON:0000930!4.96e-10!28;UBERON:0007023!3.09e-09!115;UBERON:0003408!4.26e-09!10;UBERON:0004815!5.32e-09!3;UBERON:0002031!5.32e-09!3;UBERON:0000161!5.43e-09!35;UBERON:0001949!5.77e-09!3;UBERON:0007196!6.83e-09!14;UBERON:0001558!6.83e-09!14;UBERON:0000033!8.44e-09!123;UBERON:0005178!9.06e-09!34;UBERON:0002224!9.06e-09!34;UBERON:0005181!1.93e-08!35;UBERON:0001007!2.22e-08!155;UBERON:0001555!2.22e-08!155;UBERON:0007026!2.22e-08!155;UBERON:0000072!3.89e-08!46;UBERON:0001444!4.05e-08!48;UBERON:0001044!5.92e-08!6;UBERON:0003293!5.92e-08!6;UBERON:0003294!5.92e-08!6;UBERON:0010047!5.92e-08!6;UBERON:0000167!5.92e-08!6;UBERON:0000475!2.36e-07!365;UBERON:0004807!3.26e-07!28;UBERON:0001893!4.22e-07!34;UBERON:0000078!4.88e-07!18;UBERON:0001041!7.85e-07!98;UBERON:0002185!7.92e-07!4;UBERON:0000481!8.06e-07!347;UBERON:0003127!9.33e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;1.59e-20;28!UBERON:0000161;1.99e-16;19!UBERON:0000166;1.99e-16;19!UBERON:0007196;6.79e-16;15!UBERON:0001558;6.79e-16;15!UBERON:0004815;8.01e-16;3!UBERON:0002031;8.01e-16;3!UBERON:0001949;9.11e-16;3!UBERON:0001044;2.28e-14;6!UBERON:0003293;2.28e-14;6!UBERON:0003294;2.28e-14;6!UBERON:0010047;2.28e-14;6!UBERON:0003408;2.28e-14;6!UBERON:0000167;2.28e-14;6!UBERON:0001041;3.53e-13;14!UBERON:0003126;4.64e-12;7!UBERON:0001005;4.64e-12;7!UBERON:0003127;1.80e-11;2!UBERON:0007811;2.24e-10;52!UBERON:0005178;5.47e-10;34!UBERON:0002224;5.47e-10;34!UBERON:0002185;1.06e-09;5!UBERON:0005181;1.14e-09;35!UBERON:0000153;1.23e-09;54!UBERON:0000033;2.31e-09;50!UBERON:0001444;9.79e-09;48!UBERON:0001555;1.29e-08;54!UBERON:0001004;2.15e-08;65!UBERON:0001723;2.32e-08;3!UBERON:0001033;2.32e-08;3!UBERON:0001043;3.81e-08;3!UBERON:0004807;9.68e-08;22!UBERON:0000485;4.70e-07;7!UBERON:0003929;4.96e-07;7!UBERON:0002372;6.23e-07;1!UBERON:0001961;6.23e-07;1!UBERON:0001744;6.23e-07;1!UBERON:0001042;6.23e-07;1!UBERON:0001735;6.23e-07;1!UBERON:0000486;6.74e-07;12!UBERON:0005795;7.35e-07;1!UBERON:0006834;8.67e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,3.50e-22,22;UBERON:0001004,6.08e-21,74;UBERON:0000165,9.35e-20,29;UBERON:0000930,9.35e-20,29;UBERON:0007196,7.45e-16,15;UBERON:0001558,7.45e-16,15;UBERON:0004815,8.88e-16,3;UBERON:0002031,8.88e-16,3;UBERON:0001949,1.04e-15,3;UBERON:0000161,1.43e-15,36;UBERON:0001444,3.15e-15,49;UBERON:0004119,1.37e-14,160;UBERON:0000925,1.37e-14,160;UBERON:0006595,1.37e-14,160;UBERON:0001044,2.24e-14,6;UBERON:0003293,2.24e-14,6;UBERON:0003294,2.24e-14,6;UBERON:0010047,2.24e-14,6;UBERON:0000167,2.24e-14,6;UBERON:0000153,1.57e-13,62;UBERON:0007811,1.57e-13,62;UBERON:0000033,5.48e-13,56;UBERON:0001007,2.45e-12,145;UBERON:0001555,2.45e-12,145;UBERON:0007026,2.45e-12,145;UBERON:0003126,4.91e-12,7;UBERON:0001005,4.91e-12,7;UBERON:0001041,6.17e-12,87;UBERON:0003127,1.67e-11,2;UBERON:0000065,2.22e-11,54;UBERON:0005178,8.66e-11,34;UBERON:0002224,8.66e-11,34;UBERON:0005181,1.95e-10,35;UBERON:0002185,1.13e-09,5;UBERON:0000072,2.64e-09,47;UBERON:0004921,5.35e-09,118;UBERON:0003408,1.16e-08,10;UBERON:0001723,2.32e-08,3;UBERON:0001033,2.32e-08,3;UBERON:0010056,2.32e-08,3;UBERON:0001043,3.95e-08,3;UBERON:0009143,3.95e-08,3;UBERON:0003102,2.38e-07,99;UBERON:0002372,6.23e-07,1;UBERON:0001961,6.23e-07,1;UBERON:0001744,6.23e-07,1;UBERON:0001735,6.23e-07,1;UBERON:0006834,8.67e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,11.0330546937471,4.2168828628955,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.47559303686716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54895377488563,6.19301990097322,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10531672999548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9484771619409,1.09098448236334,2.29443676311203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.100528972411631,1.29623823221941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850650583454319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.27439812593581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,1.15314040419064,2.04180339991335,0.809262246844399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,35.5260206033967,0,0,0,0,3.99087138183008,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,1.26675244876796,2.78947183551498,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.4184100427853,703.248412466201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.783939179315021,0,0,0,0,0,0,5342.34900621512,0,0,0.137041924646751,0,0.189932387867636,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0.806201669840715,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,5.59518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,17.3673912436253,0,0,0,0,0,0,0,0,0,0,0.197318320688547,0,0,0,0.157115589916002,0,0,0.863710364874486,0,0.214429632529969,0,0,0,0,4.55875561158681,19.2911879116163,36.6367620761469,23.6625047351153,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,2121.46488593286,0,0.0645889098360061,0.0620747142958579,12.3345048838675,0,0,1610.23306744593,1439.43326436469,2100.10436504785,414.339180553491,2.99394320891412,0,0,0,0,0,78.3567657212174,771.068257908324,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,11.0330546937471,4.2168828628955,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.47559303686716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54895377488563,6.19301990097322,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10531672999548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9484771619409,1.09098448236334,2.29443676311203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.100528972411631,1.29623823221941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850650583454319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.27439812593581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,1.15314040419064,2.04180339991335,0.809262246844399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,35.5260206033967,0,0,0,0,3.99087138183008,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,1.26675244876796,2.78947183551498,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.4184100427853,703.248412466201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.783939179315021,0,0,0,0,0,0,5342.34900621512,0,0,0.137041924646751,0,0.189932387867636,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0.806201669840715,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,5.59518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,17.3673912436253,0,0,0,0,0,0,0,0,0,0,0.197318320688547,0,0,0,0.157115589916002,0,0,0.863710364874486,0,0.214429632529969,0,0,0,0,4.55875561158681,19.2911879116163,36.6367620761469,23.6625047351153,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,2121.46488593286,0,0.0645889098360061,0.0620747142958579,12.3345048838675,0,0,1610.23306744593,1439.43326436469,2100.10436504785,414.339180553491,2.99394320891412,0,0,0,0,0,78.3567657212174,771.068257908324,0,0,0 | ||
|short_description=p1@CRNN | |short_description=p1@CRNN | ||
}} | }} |
Latest revision as of 03:31, 17 September 2015
Short description: | p1@CRNN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CRNN_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 0bp_to_ENST00000271835, ENST00000451038_5end |
EntrezGene: | CRNN |
HGNC: | 1230 |
UniProt: | Q9UBG3B4DQ53 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.40e-27 | 42 |
endodermal cell | 7.66e-19 | 58 |
respiratory epithelial cell | 4.45e-18 | 13 |
acinar cell of salivary gland | 1.69e-16 | 3 |
bronchial epithelial cell | 8.88e-16 | 3 |
gingival epithelial cell | 1.04e-15 | 3 |
epithelial cell of alimentary canal | 3.41e-15 | 20 |
epithelial cell of tracheobronchial tree | 6.27e-14 | 9 |
epithelial cell of lower respiratory tract | 6.27e-14 | 9 |
corneal epithelial cell | 5.23e-11 | 2 |
acinar cell | 4.25e-10 | 5 |
protein secreting cell | 1.73e-08 | 6 |
duct epithelial cell | 9.72e-08 | 3 |
branched duct epithelial cell | 9.72e-08 | 3 |
tracheal epithelial cell | 9.72e-08 | 3 |
tracheoblast | 9.72e-08 | 3 |