FFCP PHASE1:Hg19::chr3:18486809..18486824,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6304 | |EntrezGene=6304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10541 | |HGNC=10541 | ||
|TSSclassifier=strong | |||
|UniProt=C9JP21 | |UniProt=C9JP21 | ||
|association_with_transcript=-434bp_to_ENST00000440737_5end | |association_with_transcript=-434bp_to_ENST00000440737_5end | ||
|cluster_id=chr3:18486809..18486824,- | |||
|description=CAGE_peak_33_at_SATB1_5end | |description=CAGE_peak_33_at_SATB1_5end | ||
|id=chr3:18486809..18486824,- | |id=chr3:18486809..18486824,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!1.20e-16!20;UBERON:0002619!8.32e-15!22;UBERON:0000956!1.37e-12!25;UBERON:0000203!1.37e-12!25;UBERON:0001869!5.54e-12!32;UBERON:0001893!5.11e-11!34;UBERON:0002791!5.19e-10!33;UBERON:0002020!1.34e-09!34;UBERON:0003528!1.34e-09!34;UBERON:0002780!1.44e-09!41;UBERON:0001890!1.44e-09!41;UBERON:0006240!1.44e-09!41;UBERON:0003080!3.14e-09!42;UBERON:0000200!9.16e-08!6;UBERON:0007023!2.67e-07!115;UBERON:0001049!3.86e-07!57;UBERON:0005068!3.86e-07!57;UBERON:0006241!3.86e-07!57;UBERON:0007135!3.86e-07!57 | |ontology_enrichment_uberon=UBERON:0001950!1.20e-16!20;UBERON:0002619!8.32e-15!22;UBERON:0000956!1.37e-12!25;UBERON:0000203!1.37e-12!25;UBERON:0001869!5.54e-12!32;UBERON:0001893!5.11e-11!34;UBERON:0002791!5.19e-10!33;UBERON:0002020!1.34e-09!34;UBERON:0003528!1.34e-09!34;UBERON:0002780!1.44e-09!41;UBERON:0001890!1.44e-09!41;UBERON:0006240!1.44e-09!41;UBERON:0003080!3.14e-09!42;UBERON:0000200!9.16e-08!6;UBERON:0007023!2.67e-07!115;UBERON:0001049!3.86e-07!57;UBERON:0005068!3.86e-07!57;UBERON:0006241!3.86e-07!57;UBERON:0007135!3.86e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.86e-79;2!UBERON:0005058;2.86e-79;2!UBERON:0009113;2.86e-79;2!UBERON:0004177;1.57e-32;5!UBERON:0005057;1.57e-32;5!UBERON:0000077;6.92e-07;27!UBERON:0002405;6.92e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.71e-40,4;UBERON:0005058,2.71e-40,4;UBERON:0009113,2.71e-40,4;UBERON:0003295,2.71e-40,4;UBERON:0005562,2.71e-40,4;UBERON:0003351,2.72e-27,6;UBERON:0004177,1.44e-23,7;UBERON:0005057,1.44e-23,7;UBERON:0000974,7.51e-17,10;UBERON:0003408,7.51e-17,10;UBERON:0001042,7.51e-17,10;UBERON:0009145,7.51e-17,10;UBERON:0006562,2.02e-15,11;UBERON:0009722,2.02e-15,11;UBERON:0007690,2.02e-15,11;UBERON:0008814,7.76e-10,18;UBERON:0001557,2.26e-09,19 | |||
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| ||
|short_description=p33@SATB1 | |short_description=p33@SATB1 | ||
}} | }} |
Latest revision as of 03:25, 17 September 2015
Short description: | p33@SATB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_SATB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -434bp_to_ENST00000440737_5end |
EntrezGene: | SATB1 |
HGNC: | 10541 |
UniProt: | C9JP21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.71e-40 | 4 |
hemolymphoid system gland | 2.71e-40 | 4 |
thymic region | 2.71e-40 | 4 |
pharyngeal gland | 2.71e-40 | 4 |
thymus primordium | 2.71e-40 | 4 |
pharyngeal epithelium | 2.72e-27 | 6 |
hemopoietic organ | 1.44e-23 | 7 |
immune organ | 1.44e-23 | 7 |
neck | 7.51e-17 | 10 |
gland of gut | 7.51e-17 | 10 |
chordate pharynx | 7.51e-17 | 10 |
pharyngeal region of foregut | 7.51e-17 | 10 |
pharynx | 2.02e-15 | 11 |
entire pharyngeal arch endoderm | 2.02e-15 | 11 |
early pharyngeal endoderm | 2.02e-15 | 11 |
pharyngeal arch system | 7.76e-10 | 18 |
upper respiratory tract | 2.26e-09 | 19 |