FFCP PHASE1:Hg19::chr13:32313732..32313747,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122042 | |EntrezGene=122042 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17318 | |HGNC=17318 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WXD0,Q3KU23 | |UniProt=Q8WXD0,Q3KU23 | ||
|association_with_transcript=53bp_to_ENST00000298386,NM_001166058,NM_130806,uc001utt.2,uc010aba.2_5end | |association_with_transcript=53bp_to_ENST00000298386,NM_001166058,NM_130806,uc001utt.2,uc010aba.2_5end | ||
|cluster_id=chr13:32313732..32313747,+ | |||
|coexpression_cluster_id=C3364 | |coexpression_cluster_id=C3364 | ||
|description=CAGE_peak_1_at_RXFP2_5end | |description=CAGE_peak_1_at_RXFP2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002092;7.69e-17;10!CL:0002540;4.66e-13;6!CL:0000054;3.13e-10;2!CL:0000137;3.13e-10;2!CL:0000092;3.13e-10;2 | |ontology_enrichment_celltype_v019=CL:0002092;7.69e-17;10!CL:0002540;4.66e-13;6!CL:0000054;3.13e-10;2!CL:0000137;3.13e-10;2!CL:0000092;3.13e-10;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002092,7.69e-17,10;CL:0002540,5.11e-13,6;CL:0000054,2.72e-10,2;CL:0000137,2.72e-10,2;CL:0000092,2.72e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0005795;6.54e-17;10!UBERON:0007297;1.72e-10;2 | |ontology_enrichment_development_v019=UBERON:0005795;6.54e-17;10!UBERON:0007297;1.72e-10;2 | ||
|ontology_enrichment_disease=DOID:0060072!1.15e-14!4;DOID:0060084!2.51e-09!3;DOID:127!2.51e-09!3;DOID:0060085!1.54e-07!1;DOID:3165!1.54e-07!1;DOID:0060121!1.54e-07!1;DOID:2438!1.54e-07!1;DOID:4418!1.54e-07!1;DOID:5662!3.85e-07!1 | |ontology_enrichment_disease=DOID:0060072!1.15e-14!4;DOID:0060084!2.51e-09!3;DOID:127!2.51e-09!3;DOID:0060085!1.54e-07!1;DOID:3165!1.54e-07!1;DOID:0060121!1.54e-07!1;DOID:2438!1.54e-07!1;DOID:4418!1.54e-07!1;DOID:5662!3.85e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:0060072;6.16e-41;4!DOID:0060084;4.31e-25;3!DOID:127;4.31e-25;3!DOID:0060085;4.28e-19;1!DOID:3165;4.28e-19;1!DOID:0060121;4.28e-19;1!DOID:2438;4.28e-19;1!DOID:4418;4.28e-19;1!DOID:200;3.13e-10;2!DOID:4305;3.13e-10;2 | |ontology_enrichment_disease_v019=DOID:0060072;6.16e-41;4!DOID:0060084;4.31e-25;3!DOID:127;4.31e-25;3!DOID:0060085;4.28e-19;1!DOID:3165;4.28e-19;1!DOID:0060121;4.28e-19;1!DOID:2438;4.28e-19;1!DOID:4418;4.28e-19;1!DOID:200;3.13e-10;2!DOID:4305;3.13e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:0060072,5.02e-41,4;DOID:0060084,4.31e-25,3;DOID:127,4.31e-25,3;DOID:0060085,3.25e-19,1;DOID:3165,3.25e-19,1;DOID:0060121,3.25e-19,1;DOID:2438,3.25e-19,1;DOID:4418,3.25e-19,1;DOID:200,2.72e-10,2;DOID:4305,2.72e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0000369!1.34e-13!4;UBERON:0002435!1.34e-13!4;UBERON:0000204!1.34e-13!4;UBERON:0010082!1.34e-13!4;UBERON:0000349!5.70e-11!5;UBERON:0002420!1.41e-10!9;UBERON:0007245!1.41e-10!9;UBERON:0010009!1.41e-10!9;UBERON:0010011!1.41e-10!9;UBERON:0000454!1.41e-10!9;UBERON:0001869!3.79e-10!32;UBERON:0002780!8.01e-10!41;UBERON:0001890!8.01e-10!41;UBERON:0006240!8.01e-10!41;UBERON:0002791!8.14e-10!33;UBERON:0003080!1.46e-09!42;UBERON:0002020!1.68e-09!34;UBERON:0003528!1.68e-09!34;UBERON:0001893!1.68e-09!34;UBERON:0005383!8.36e-09!3;UBERON:0005382!8.36e-09!3;UBERON:0009663!5.54e-08!7;UBERON:0001282!1.06e-07!1;UBERON:0009842!1.06e-07!1;UBERON:0003704!1.06e-07!1;UBERON:0001171!1.06e-07!1;UBERON:0001172!1.06e-07!1;UBERON:0001301!1.12e-07!1;UBERON:0001874!2.09e-07!1;UBERON:0006834!2.52e-07!1;UBERON:0007023!3.86e-07!115;UBERON:0001882!6.97e-07!1;UBERON:0005403!6.97e-07!1 | |ontology_enrichment_uberon=UBERON:0000369!1.34e-13!4;UBERON:0002435!1.34e-13!4;UBERON:0000204!1.34e-13!4;UBERON:0010082!1.34e-13!4;UBERON:0000349!5.70e-11!5;UBERON:0002420!1.41e-10!9;UBERON:0007245!1.41e-10!9;UBERON:0010009!1.41e-10!9;UBERON:0010011!1.41e-10!9;UBERON:0000454!1.41e-10!9;UBERON:0001869!3.79e-10!32;UBERON:0002780!8.01e-10!41;UBERON:0001890!8.01e-10!41;UBERON:0006240!8.01e-10!41;UBERON:0002791!8.14e-10!33;UBERON:0003080!1.46e-09!42;UBERON:0002020!1.68e-09!34;UBERON:0003528!1.68e-09!34;UBERON:0001893!1.68e-09!34;UBERON:0005383!8.36e-09!3;UBERON:0005382!8.36e-09!3;UBERON:0009663!5.54e-08!7;UBERON:0001282!1.06e-07!1;UBERON:0009842!1.06e-07!1;UBERON:0003704!1.06e-07!1;UBERON:0001171!1.06e-07!1;UBERON:0001172!1.06e-07!1;UBERON:0001301!1.12e-07!1;UBERON:0001874!2.09e-07!1;UBERON:0006834!2.52e-07!1;UBERON:0007023!3.86e-07!115;UBERON:0001882!6.97e-07!1;UBERON:0005403!6.97e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.08e-19;1!UBERON:0009842;1.08e-19;1!UBERON:0003704;1.08e-19;1!UBERON:0001171;1.08e-19;1!UBERON:0001172;1.08e-19;1!UBERON:0001301;1.30e-19;1!UBERON:0005795;2.71e-19;1!UBERON:0002371;3.77e-14;12!UBERON:0001474;1.21e-09;18!UBERON:0004175;2.00e-08;21!UBERON:0000058;2.72e-08;10!UBERON:0003135;1.64e-07;11!UBERON:0001280;1.93e-07;3!UBERON:0004647;1.93e-07;3!UBERON:0006947;2.05e-07;3!UBERON:0004054;2.05e-07;3!UBERON:0004765;7.56e-07;26 | |ontology_enrichment_uberon_v019=UBERON:0001282;1.08e-19;1!UBERON:0009842;1.08e-19;1!UBERON:0003704;1.08e-19;1!UBERON:0001171;1.08e-19;1!UBERON:0001172;1.08e-19;1!UBERON:0001301;1.30e-19;1!UBERON:0005795;2.71e-19;1!UBERON:0002371;3.77e-14;12!UBERON:0001474;1.21e-09;18!UBERON:0004175;2.00e-08;21!UBERON:0000058;2.72e-08;10!UBERON:0003135;1.64e-07;11!UBERON:0001280;1.93e-07;3!UBERON:0004647;1.93e-07;3!UBERON:0006947;2.05e-07;3!UBERON:0004054;2.05e-07;3!UBERON:0004765;7.56e-07;26 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.08e-19,1;UBERON:0009842,1.08e-19,1;UBERON:0003704,1.08e-19,1;UBERON:0001171,1.08e-19,1;UBERON:0001172,1.08e-19,1;UBERON:0001301,1.30e-19,1;UBERON:0005795,5.01e-08,22;UBERON:0003135,1.67e-07,11;UBERON:0001280,1.93e-07,3;UBERON:0004647,1.93e-07,3;UBERON:0005171,1.93e-07,3;UBERON:0006947,2.05e-07,3;UBERON:0004054,2.05e-07,3;UBERON:0004175,3.64e-07,25 | |||
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|short_description=p1@RXFP2 | |short_description=p1@RXFP2 | ||
}} | }} |
Latest revision as of 03:24, 17 September 2015
Short description: | p1@RXFP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RXFP2_5end |
Coexpression cluster: | C3364_mesenchymal_leiomyoma_cholangiocellular_epididymis_hairy_putamen_uterus |
Association with transcript: | 53bp_to_ENST00000298386, NM_001166058, NM_130806, uc001utt.2, uc010aba.2_5end |
EntrezGene: | RXFP2 |
HGNC: | 17318 |
UniProt: | Q8WXD0Q3KU23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 7.69e-17 | 10 |
mesenchymal stem cell of the bone marrow | 5.11e-13 | 6 |
bone matrix secreting cell | 2.72e-10 | 2 |
osteocyte | 2.72e-10 | 2 |
osteoclast | 2.72e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.08e-19 | 1 |
acinus | 1.08e-19 | 1 |
intrahepatic bile duct | 1.08e-19 | 1 |
portal lobule | 1.08e-19 | 1 |
hepatic acinus | 1.08e-19 | 1 |
epididymis | 1.30e-19 | 1 |
embryonic uterus | 5.01e-08 | 22 |
male reproductive organ | 1.67e-07 | 11 |
liver parenchyma | 1.93e-07 | 3 |
liver lobule | 1.93e-07 | 3 |
hepatic duct | 1.93e-07 | 3 |
male genital duct | 2.05e-07 | 3 |
internal male genitalia | 2.05e-07 | 3 |
internal genitalia | 3.64e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
benign neoplasm | 5.02e-41 | 4 |
cell type benign neoplasm | 4.31e-25 | 3 |
leiomyoma | 4.31e-25 | 3 |
organ system benign neoplasm | 3.25e-19 | 1 |
skin benign neoplasm | 3.25e-19 | 1 |
integumentary system benign neoplasm | 3.25e-19 | 1 |
dermis tumor | 3.25e-19 | 1 |
cutaneous fibrous histiocytoma | 3.25e-19 | 1 |
giant cell tumor | 2.72e-10 | 2 |
bone giant cell tumor | 2.72e-10 | 2 |