FFCP PHASE1:Hg19::chr3:18480192..18480198,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6304 | |EntrezGene=6304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10541 | |HGNC=10541 | ||
|TSSclassifier=strong | |||
|UniProt=C9JLL5 | |UniProt=C9JLL5 | ||
|association_with_transcript=-8bp_to_ENST00000414509_5end | |association_with_transcript=-8bp_to_ENST00000414509_5end | ||
|cluster_id=chr3:18480192..18480198,- | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_22_at_SATB1_5end | |description=CAGE_peak_22_at_SATB1_5end | ||
|id=chr3:18480192..18480198,- | |id=chr3:18480192..18480198,- | ||
|ontology_enrichment_celltype=CL:0000791!1.44e-23!18;CL:0000789!1.44e-23!18;CL:0002420!1.44e-23!18;CL:0002419!1.44e-23!18;CL:0000790!1.44e-23!18;CL:0000084!1.35e-22!25;CL:0000827!1.35e-22!25;CL:0000624!2.52e-14!6;CL:0000838!3.76e-14!52;CL:0000542!8.35e-14!53;CL:0000051!8.35e-14!53;CL:0000625!3.90e-13!11;CL:0000623!7.66e-11!3;CL:0000825!7.66e-11!3;CL:0002087!1.08e-08!119;CL:0000815!7.51e-08!2;CL:0000792!7.51e-08!2;CL:0002677!7.51e-08!2 | |ontology_enrichment_celltype=CL:0000791!1.44e-23!18;CL:0000789!1.44e-23!18;CL:0002420!1.44e-23!18;CL:0002419!1.44e-23!18;CL:0000790!1.44e-23!18;CL:0000084!1.35e-22!25;CL:0000827!1.35e-22!25;CL:0000624!2.52e-14!6;CL:0000838!3.76e-14!52;CL:0000542!8.35e-14!53;CL:0000051!8.35e-14!53;CL:0000625!3.90e-13!11;CL:0000623!7.66e-11!3;CL:0000825!7.66e-11!3;CL:0002087!1.08e-08!119;CL:0000815!7.51e-08!2;CL:0000792!7.51e-08!2;CL:0002677!7.51e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000226;8.86e-07;3!CL:0000623;8.86e-07;3!CL:0000842;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,9.12e-07,3;CL:0000825,9.12e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!2.73e-12!34;UBERON:0002619!5.92e-12!22;UBERON:0001869!3.01e-11!32;UBERON:0001950!8.05e-11!20;UBERON:0002791!9.02e-11!33;UBERON:0001872!1.09e-10!5;UBERON:0000956!2.40e-10!25;UBERON:0000203!2.40e-10!25;UBERON:0002780!9.09e-10!41;UBERON:0001890!9.09e-10!41;UBERON:0006240!9.09e-10!41;UBERON:0003080!1.78e-09!42;UBERON:0002020!9.87e-09!34;UBERON:0003528!9.87e-09!34 | |ontology_enrichment_uberon=UBERON:0001893!2.73e-12!34;UBERON:0002619!5.92e-12!22;UBERON:0001869!3.01e-11!32;UBERON:0001950!8.05e-11!20;UBERON:0002791!9.02e-11!33;UBERON:0001872!1.09e-10!5;UBERON:0000956!2.40e-10!25;UBERON:0000203!2.40e-10!25;UBERON:0002780!9.09e-10!41;UBERON:0001890!9.09e-10!41;UBERON:0006240!9.09e-10!41;UBERON:0003080!1.78e-09!42;UBERON:0002020!9.87e-09!34;UBERON:0003528!9.87e-09!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.11e-34;2!UBERON:0005058;1.11e-34;2!UBERON:0009113;1.11e-34;2!UBERON:0004177;1.61e-14;5!UBERON:0005057;1.61e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.79e-18,4;UBERON:0005058,6.79e-18,4;UBERON:0009113,6.79e-18,4;UBERON:0003295,6.79e-18,4;UBERON:0005562,6.79e-18,4;UBERON:0003351,2.91e-12,6;UBERON:0004177,1.21e-10,7;UBERON:0005057,1.21e-10,7;UBERON:0000974,1.02e-07,10;UBERON:0003408,1.02e-07,10;UBERON:0001042,1.02e-07,10;UBERON:0009145,1.02e-07,10;UBERON:0006562,4.30e-07,11;UBERON:0009722,4.30e-07,11;UBERON:0007690,4.30e-07,11 | |||
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| ||
|short_description=p22@SATB1 | |short_description=p22@SATB1 | ||
}} | }} |
Latest revision as of 03:13, 17 September 2015
Short description: | p22@SATB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_SATB1_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -8bp_to_ENST00000414509_5end |
EntrezGene: | SATB1 |
HGNC: | 10541 |
UniProt: | C9JLL5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 9.12e-07 | 3 |
pro-NK cell | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 6.79e-18 | 4 |
hemolymphoid system gland | 6.79e-18 | 4 |
thymic region | 6.79e-18 | 4 |
pharyngeal gland | 6.79e-18 | 4 |
thymus primordium | 6.79e-18 | 4 |
pharyngeal epithelium | 2.91e-12 | 6 |
hemopoietic organ | 1.21e-10 | 7 |
immune organ | 1.21e-10 | 7 |
neck | 1.02e-07 | 10 |
gland of gut | 1.02e-07 | 10 |
chordate pharynx | 1.02e-07 | 10 |
pharyngeal region of foregut | 1.02e-07 | 10 |
pharynx | 4.30e-07 | 11 |
entire pharyngeal arch endoderm | 4.30e-07 | 11 |
early pharyngeal endoderm | 4.30e-07 | 11 |