FFCP PHASE1:Hg19::chr6:20403727..20403769,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:20403727..20403769,+ to FFCP PHASE1:Hg19::chr6:20403727..20403769,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1871 | |EntrezGene=1871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3115 | |HGNC=3115 | ||
|TSSclassifier=strong | |||
|UniProt=Q68DT0 | |UniProt=Q68DT0 | ||
|association_with_transcript=-264bp_to_ENST00000535432,NM_001243076_5end | |||
|cluster_id=chr6:20403727..20403769,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_E2F3_5end | |||
|id=chr6:20403727..20403769,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.40e-19!45;CL:0002057!2.20e-18!42;CL:0002194!5.87e-15!63;CL:0000576!5.87e-15!63;CL:0000040!5.87e-15!63;CL:0000559!5.87e-15!63;CL:0000763!8.11e-15!112;CL:0000049!8.11e-15!112;CL:0000766!9.81e-15!76;CL:0002009!7.94e-14!65;CL:0000839!8.32e-14!70;CL:0000557!4.21e-13!71;CL:0000063!4.91e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.83e-18;33!CL:0002057;1.83e-18;33!CL:0000473;2.52e-14;39!CL:0000234;2.52e-14;39!CL:0000576;4.28e-10;48!CL:0000766;1.80e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.62e-19,42;CL:0002057,6.62e-19,42;CL:0000473,6.74e-18,48;CL:0000234,6.74e-18,48;CL:0000763,7.28e-14,108;CL:0000049,7.28e-14,108;CL:0002194,3.93e-13,59;CL:0000576,3.93e-13,59;CL:0000040,3.93e-13,59;CL:0000559,3.93e-13,59;CL:0000766,5.88e-13,72;CL:0002009,3.03e-12,61;CL:0000839,6.31e-12,66;CL:0000557,1.93e-11,67 | |||
|ontology_enrichment_development_v019=CL:0002057;5.96e-15;42 | |||
|ontology_enrichment_disease=DOID:162!9.28e-14!235;DOID:14566!1.80e-13!239;DOID:0050687!1.85e-11!143;DOID:305!6.09e-10!106;DOID:0050686!5.21e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.05e-13,235;DOID:14566,5.48e-13,239;DOID:0050687,3.15e-11,143;DOID:305,2.39e-09,106;DOID:0050686,7.47e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.72e-13!112;UBERON:0002390!1.22e-12!102;UBERON:0003061!1.22e-12!102;UBERON:0001474!1.26e-12!86;UBERON:0002371!2.85e-11!80;UBERON:0004765!7.17e-11!101;UBERON:0001434!7.17e-11!101;UBERON:0002405!2.90e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.54e-11,108;UBERON:0002390,2.82e-11,98;UBERON:0003061,2.82e-11,98;UBERON:0001474,3.28e-11,82;UBERON:0002371,7.65e-10,76;UBERON:0004765,6.07e-09,90;UBERON:0002405,1.00e-08,93;UBERON:0001434,2.73e-08,100 | |||
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| ||
|short_description=p4@E2F3 | |||
}} | }} |
Latest revision as of 03:05, 17 September 2015
Short description: | p4@E2F3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_E2F3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -264bp_to_ENST00000535432, NM_001243076_5end |
EntrezGene: | E2F3 |
HGNC: | 3115 |
UniProt: | Q68DT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.62e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.62e-19 | 42 |
defensive cell | 6.74e-18 | 48 |
phagocyte | 6.74e-18 | 48 |
myeloid cell | 7.28e-14 | 108 |
common myeloid progenitor | 7.28e-14 | 108 |
monopoietic cell | 3.93e-13 | 59 |
monocyte | 3.93e-13 | 59 |
monoblast | 3.93e-13 | 59 |
promonocyte | 3.93e-13 | 59 |
myeloid leukocyte | 5.88e-13 | 72 |
macrophage dendritic cell progenitor | 3.03e-12 | 61 |
myeloid lineage restricted progenitor cell | 6.31e-12 | 66 |
granulocyte monocyte progenitor cell | 1.93e-11 | 67 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.54e-11 | 108 |
hematopoietic system | 2.82e-11 | 98 |
blood island | 2.82e-11 | 98 |
bone element | 3.28e-11 | 82 |
bone marrow | 7.65e-10 | 76 |
skeletal element | 6.07e-09 | 90 |
immune system | 1.00e-08 | 93 |
skeletal system | 2.73e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.05e-13 | 235 |
disease of cellular proliferation | 5.48e-13 | 239 |
cell type cancer | 3.15e-11 | 143 |
carcinoma | 2.39e-09 | 106 |
organ system cancer | 7.47e-07 | 137 |