FFCP PHASE1:Hg19::chr3:18462463..18462475,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6304 | |EntrezGene=6304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10541 | |HGNC=10541 | ||
|TSSclassifier=strong | |||
|UniProt=C9IZC5 | |UniProt=C9IZC5 | ||
|association_with_transcript=404bp_to_ENST00000452260_5end | |association_with_transcript=404bp_to_ENST00000452260_5end | ||
|cluster_id=chr3:18462463..18462475,- | |||
|coexpression_cluster_id=C132 | |||
|description=CAGE_peak_45_at_SATB1_5end | |description=CAGE_peak_45_at_SATB1_5end | ||
|id=chr3:18462463..18462475,- | |id=chr3:18462463..18462475,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;8.45e-09;31!DOID:1240;6.81e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.54e-09,31;DOID:1240,2.85e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002619!2.43e-20!22;UBERON:0001950!7.28e-19!20;UBERON:0001869!1.83e-18!32;UBERON:0000956!1.08e-17!25;UBERON:0000203!1.08e-17!25;UBERON:0001893!3.16e-17!34;UBERON:0002791!3.43e-15!33;UBERON:0002020!1.12e-14!34;UBERON:0003528!1.12e-14!34;UBERON:0002780!7.84e-14!41;UBERON:0001890!7.84e-14!41;UBERON:0006240!7.84e-14!41;UBERON:0003080!1.94e-13!42;UBERON:0002771!9.32e-12!3;UBERON:0000200!3.55e-10!6;UBERON:0007023!4.16e-10!115;UBERON:0001049!3.53e-09!57;UBERON:0005068!3.53e-09!57;UBERON:0006241!3.53e-09!57;UBERON:0007135!3.53e-09!57;UBERON:0002616!8.95e-09!59;UBERON:0003056!2.13e-08!61;UBERON:0000955!4.24e-08!69;UBERON:0006238!4.24e-08!69;UBERON:0001871!1.53e-07!7;UBERON:0001017!1.97e-07!82;UBERON:0002021!3.31e-07!5;UBERON:0005743!6.05e-07!86 | |ontology_enrichment_uberon=UBERON:0002619!2.43e-20!22;UBERON:0001950!7.28e-19!20;UBERON:0001869!1.83e-18!32;UBERON:0000956!1.08e-17!25;UBERON:0000203!1.08e-17!25;UBERON:0001893!3.16e-17!34;UBERON:0002791!3.43e-15!33;UBERON:0002020!1.12e-14!34;UBERON:0003528!1.12e-14!34;UBERON:0002780!7.84e-14!41;UBERON:0001890!7.84e-14!41;UBERON:0006240!7.84e-14!41;UBERON:0003080!1.94e-13!42;UBERON:0002771!9.32e-12!3;UBERON:0000200!3.55e-10!6;UBERON:0007023!4.16e-10!115;UBERON:0001049!3.53e-09!57;UBERON:0005068!3.53e-09!57;UBERON:0006241!3.53e-09!57;UBERON:0007135!3.53e-09!57;UBERON:0002616!8.95e-09!59;UBERON:0003056!2.13e-08!61;UBERON:0000955!4.24e-08!69;UBERON:0006238!4.24e-08!69;UBERON:0001871!1.53e-07!7;UBERON:0001017!1.97e-07!82;UBERON:0002021!3.31e-07!5;UBERON:0005743!6.05e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.51e-57;2!UBERON:0005058;5.51e-57;2!UBERON:0009113;5.51e-57;2!UBERON:0004177;1.52e-23;5!UBERON:0005057;1.52e-23;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.16e-29,4;UBERON:0005058,3.16e-29,4;UBERON:0009113,3.16e-29,4;UBERON:0003295,3.16e-29,4;UBERON:0005562,3.16e-29,4;UBERON:0003351,7.13e-20,6;UBERON:0004177,3.42e-17,7;UBERON:0005057,3.42e-17,7;UBERON:0000974,2.37e-12,10;UBERON:0003408,2.37e-12,10;UBERON:0001042,2.37e-12,10;UBERON:0009145,2.37e-12,10;UBERON:0006562,2.55e-11,11;UBERON:0009722,2.55e-11,11;UBERON:0007690,2.55e-11,11;UBERON:0002405,6.96e-08,93;UBERON:0002390,1.70e-07,98;UBERON:0003061,1.70e-07,98;UBERON:0008814,2.77e-07,18;UBERON:0001557,6.01e-07,19;UBERON:0002193,7.91e-07,108 | |||
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| ||
|short_description=p45@SATB1 | |short_description=p45@SATB1 | ||
}} | }} |
Latest revision as of 02:57, 17 September 2015
Short description: | p45@SATB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_45_at_SATB1_5end |
Coexpression cluster: | C132_acute_small_Dendritic_Macrophage_CD14_Neutrophils_Monocytederived |
Association with transcript: | 404bp_to_ENST00000452260_5end |
EntrezGene: | SATB1 |
HGNC: | 10541 |
UniProt: | C9IZC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.16e-29 | 4 |
hemolymphoid system gland | 3.16e-29 | 4 |
thymic region | 3.16e-29 | 4 |
pharyngeal gland | 3.16e-29 | 4 |
thymus primordium | 3.16e-29 | 4 |
pharyngeal epithelium | 7.13e-20 | 6 |
hemopoietic organ | 3.42e-17 | 7 |
immune organ | 3.42e-17 | 7 |
neck | 2.37e-12 | 10 |
gland of gut | 2.37e-12 | 10 |
chordate pharynx | 2.37e-12 | 10 |
pharyngeal region of foregut | 2.37e-12 | 10 |
pharynx | 2.55e-11 | 11 |
entire pharyngeal arch endoderm | 2.55e-11 | 11 |
early pharyngeal endoderm | 2.55e-11 | 11 |
immune system | 6.96e-08 | 93 |
hematopoietic system | 1.70e-07 | 98 |
blood island | 1.70e-07 | 98 |
pharyngeal arch system | 2.77e-07 | 18 |
upper respiratory tract | 6.01e-07 | 19 |
hemolymphoid system | 7.91e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.54e-09 | 31 |
leukemia | 2.85e-07 | 39 |