FFCP PHASE1:Hg19::chr11:18291457..18291488,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:18291457..18291488,+
|short_description=p3@SAA1
|description=CAGE_peak_3_at_SAA1_5end
|association_with_transcript=196bp_to_X51439_5end
|EntrezGene=6288
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6288 | |EntrezGene=6288 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10513 | |HGNC=10513 | ||
|TSSclassifier=strong | |||
|UniProt=P02735 | |UniProt=P02735 | ||
|association_with_transcript=196bp_to_X51439_5end | |||
|cluster_id=chr11:18291457..18291488,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_SAA1_5end | |||
|id=chr11:18291457..18291488,+ | |||
|ontology_enrichment_celltype=CL:0000136!3.39e-16!15;CL:0000223!8.22e-12!59;CL:0002076!1.18e-10!43;CL:0002615!4.95e-09!3;CL:0002621!8.97e-09!3;CL:0002251!5.30e-08!21;CL:0002623!6.09e-08!3;CL:0000325!4.85e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.16e-38;13!CL:0002615;8.06e-25;3!CL:0002621;6.01e-24;3!CL:0002617;4.87e-17;2!CL:0000182;3.17e-11;12!CL:0002616;1.26e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.93e-33,15;CL:0002615,8.75e-25,3;CL:0002621,5.56e-24,3;CL:0002617,3.38e-17,2;CL:0000182,3.62e-11,12;CL:0000223,8.10e-10,58;CL:0002616,1.21e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.69e-09;1!CL:0000223;7.38e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!8.97e-09!3;UBERON:0009569!3.18e-08!113;UBERON:0000466!7.36e-08!126;UBERON:0002417!7.38e-08!61;UBERON:0000916!7.38e-08!61;UBERON:0002365!9.86e-08!31;UBERON:0002330!9.86e-08!31;UBERON:0003688!2.09e-07!6;UBERON:0002358!2.09e-07!6;UBERON:0003684!2.09e-07!6;UBERON:0001178!2.09e-07!6;UBERON:0004119!6.20e-07!169;UBERON:0000925!6.20e-07!169;UBERON:0006595!6.20e-07!169;UBERON:0009497!9.77e-07!25;UBERON:0000015!9.77e-07!25;UBERON:0002423!9.77e-07!25;UBERON:0006235!9.77e-07!25;UBERON:0004161!9.77e-07!25 | |||
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| ||
|short_description=p3@SAA1 | |||
}} | }} |
Latest revision as of 02:20, 17 September 2015
Short description: | p3@SAA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SAA1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 196bp_to_X51439_5end |
EntrezGene: | SAA1 |
HGNC: | 10513 |
UniProt: | P02735 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.93e-33 | 15 |
adipocyte of omentum tissue | 8.75e-25 | 3 |
gingival epithelial cell | 5.56e-24 | 3 |
adipocyte of breast | 3.38e-17 | 2 |
hepatocyte | 3.62e-11 | 12 |
endodermal cell | 8.10e-10 | 58 |
perirenal adipocyte cell | 1.21e-09 | 1 |