FFCP PHASE1:Hg19::chr11:18287664..18287680,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6288 | |EntrezGene=6288 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10513 | |HGNC=10513 | ||
|TSSclassifier=strong | |||
|UniProt=P02735 | |UniProt=P02735 | ||
|association_with_transcript=-40bp_to_ENST00000356524_5end | |association_with_transcript=-40bp_to_ENST00000356524_5end | ||
|cluster_id=chr11:18287664..18287680,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_SAA1_5end | |description=CAGE_peak_6_at_SAA1_5end | ||
|id=chr11:18287664..18287680,+ | |id=chr11:18287664..18287680,+ | ||
|ontology_enrichment_celltype=CL:0000136!1.29e-19!15;CL:0002617!1.88e-17!2;CL:0002616!6.31e-10!1;CL:0002561!8.91e-10!1;CL:0000313!1.91e-09!1;CL:1001319!2.26e-09!1;CL:1000600!2.26e-09!1;CL:0002327!3.16e-09!4;CL:0000325!2.92e-07!39;CL:0000181!4.50e-07!12;CL:0000417!4.50e-07!12;CL:0000668!4.50e-07!12;CL:0000414!4.50e-07!12;CL:0000412!4.50e-07!12;CL:0000182!4.50e-07!12 | |ontology_enrichment_celltype=CL:0000136!1.29e-19!15;CL:0002617!1.88e-17!2;CL:0002616!6.31e-10!1;CL:0002561!8.91e-10!1;CL:0000313!1.91e-09!1;CL:1001319!2.26e-09!1;CL:1000600!2.26e-09!1;CL:0002327!3.16e-09!4;CL:0000325!2.92e-07!39;CL:0000181!4.50e-07!12;CL:0000417!4.50e-07!12;CL:0000668!4.50e-07!12;CL:0000414!4.50e-07!12;CL:0000412!4.50e-07!12;CL:0000182!4.50e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.22e-30;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.22e-30,12;CL:0000223,6.02e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000223;6.55e-07;58 | |||
|ontology_enrichment_disease=DOID:2152!1.91e-09!1 | |ontology_enrichment_disease=DOID:2152!1.91e-09!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!1.10e-12!31;UBERON:0002330!1.10e-12!31;UBERON:0002107!3.39e-11!19;UBERON:0006925!3.39e-11!19;UBERON:0008836!3.39e-11!19;UBERON:0006122!5.31e-10!1;UBERON:0005933!8.91e-10!1;UBERON:0005942!8.91e-10!1;UBERON:0005932!8.91e-10!1;UBERON:0008835!1.21e-09!22;UBERON:0003894!1.21e-09!22;UBERON:0004911!1.91e-09!1;UBERON:0004645!2.26e-09!1;UBERON:0001256!2.26e-09!1;UBERON:0001259!2.26e-09!1;UBERON:0002363!2.67e-09!1;UBERON:0007647!2.67e-09!1;UBERON:0010115!2.67e-09!1;UBERON:0001911!3.16e-09!4;UBERON:0005333!3.16e-09!4;UBERON:0008425!3.16e-09!4;UBERON:0005311!3.16e-09!4;UBERON:0009854!3.24e-09!23;UBERON:0009569!1.17e-08!113;UBERON:0007499!1.84e-08!25;UBERON:0009497!1.84e-08!25;UBERON:0000015!1.84e-08!25;UBERON:0002423!1.84e-08!25;UBERON:0006235!1.84e-08!25;UBERON:0004161!1.84e-08!25;UBERON:0005057!3.96e-08!26;UBERON:0009856!3.96e-08!26;UBERON:0000310!4.32e-08!10;UBERON:0001443!2.14e-07!11 | |ontology_enrichment_uberon=UBERON:0002365!1.10e-12!31;UBERON:0002330!1.10e-12!31;UBERON:0002107!3.39e-11!19;UBERON:0006925!3.39e-11!19;UBERON:0008836!3.39e-11!19;UBERON:0006122!5.31e-10!1;UBERON:0005933!8.91e-10!1;UBERON:0005942!8.91e-10!1;UBERON:0005932!8.91e-10!1;UBERON:0008835!1.21e-09!22;UBERON:0003894!1.21e-09!22;UBERON:0004911!1.91e-09!1;UBERON:0004645!2.26e-09!1;UBERON:0001256!2.26e-09!1;UBERON:0001259!2.26e-09!1;UBERON:0002363!2.67e-09!1;UBERON:0007647!2.67e-09!1;UBERON:0010115!2.67e-09!1;UBERON:0001911!3.16e-09!4;UBERON:0005333!3.16e-09!4;UBERON:0008425!3.16e-09!4;UBERON:0005311!3.16e-09!4;UBERON:0009854!3.24e-09!23;UBERON:0009569!1.17e-08!113;UBERON:0007499!1.84e-08!25;UBERON:0009497!1.84e-08!25;UBERON:0000015!1.84e-08!25;UBERON:0002423!1.84e-08!25;UBERON:0006235!1.84e-08!25;UBERON:0004161!1.84e-08!25;UBERON:0005057!3.96e-08!26;UBERON:0009856!3.96e-08!26;UBERON:0000310!4.32e-08!10;UBERON:0001443!2.14e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.04e-34;19!UBERON:0006925;7.04e-34;19!UBERON:0002423;5.75e-26;25!UBERON:0002365;8.80e-22;31!UBERON:0002330;8.80e-22;31!UBERON:0002368;1.63e-17;33!UBERON:0000949;1.13e-14;43!UBERON:0005172;8.84e-11;52!UBERON:0005173;8.84e-11;52!UBERON:0002530;4.28e-08;57!UBERON:0001007;6.25e-08;81!UBERON:0002417;2.01e-07;58!UBERON:0000916;2.01e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.04e-34,19;UBERON:0006925,7.04e-34,19;UBERON:0008836,7.04e-34,19;UBERON:0008835,2.19e-29,22;UBERON:0003894,2.19e-29,22;UBERON:0009854,3.80e-28,23;UBERON:0007499,5.75e-26,25;UBERON:0009497,5.75e-26,25;UBERON:0000015,5.75e-26,25;UBERON:0002423,5.75e-26,25;UBERON:0006235,5.75e-26,25;UBERON:0004161,5.75e-26,25;UBERON:0009856,5.31e-25,26;UBERON:0002365,4.17e-21,31;UBERON:0002330,4.17e-21,31;UBERON:0002368,8.68e-19,35;UBERON:0000949,8.74e-15,45;UBERON:0003929,1.93e-12,54;UBERON:0005172,1.93e-12,54;UBERON:0005173,1.93e-12,54;UBERON:0002530,1.91e-11,59;UBERON:0002417,2.88e-11,60;UBERON:0000916,2.88e-11,60;UBERON:0009569,1.80e-09,112;UBERON:0005911,2.05e-08,82;UBERON:0001041,5.76e-08,87;UBERON:0005177,6.11e-07,101 | |||
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|short_description=p6@SAA1 | |short_description=p6@SAA1 | ||
}} | }} |
Latest revision as of 02:15, 17 September 2015
Short description: | p6@SAA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SAA1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -40bp_to_ENST00000356524_5end |
EntrezGene: | SAA1 |
HGNC: | 10513 |
UniProt: | P02735 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.22e-30 | 12 |
endodermal cell | 6.02e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 7.04e-34 | 19 |
digestive gland | 7.04e-34 | 19 |
liver bud | 7.04e-34 | 19 |
hepatic diverticulum | 2.19e-29 | 22 |
liver primordium | 2.19e-29 | 22 |
digestive tract diverticulum | 3.80e-28 | 23 |
epithelial sac | 5.75e-26 | 25 |
epithelium of foregut-midgut junction | 5.75e-26 | 25 |
anatomical boundary | 5.75e-26 | 25 |
hepatobiliary system | 5.75e-26 | 25 |
foregut-midgut junction | 5.75e-26 | 25 |
septum transversum | 5.75e-26 | 25 |
sac | 5.31e-25 | 26 |
exocrine gland | 4.17e-21 | 31 |
exocrine system | 4.17e-21 | 31 |
endocrine gland | 8.68e-19 | 35 |
endocrine system | 8.74e-15 | 45 |
gut epithelium | 1.93e-12 | 54 |
abdomen element | 1.93e-12 | 54 |
abdominal segment element | 1.93e-12 | 54 |
gland | 1.91e-11 | 59 |
abdominal segment of trunk | 2.88e-11 | 60 |
abdomen | 2.88e-11 | 60 |
subdivision of trunk | 1.80e-09 | 112 |
endo-epithelium | 2.05e-08 | 82 |
foregut | 5.76e-08 | 87 |
trunk region element | 6.11e-07 | 101 |