FFCP PHASE1:Hg19::chr10:129691195..129691212,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:129691195..129691212,-
|short_description=p1@CLRN3
|description=CAGE_peak_1_at_CLRN3_5end
|association_with_transcript=0bp_to_ENST00000368671,NM_152311,uc...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=119467 | |EntrezGene=119467 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20795 | |HGNC=20795 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NCR9 | |UniProt=Q8NCR9 | ||
|association_with_transcript=0bp_to_ENST00000368671,NM_152311,uc001lka.1_5end | |||
|cluster_id=chr10:129691195..129691212,- | |||
|coexpression_cluster_id=C579 | |||
|description=CAGE_peak_1_at_CLRN3_5end | |||
|id=chr10:129691195..129691212,- | |||
|ontology_enrichment_celltype=CL:0002178!4.43e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.93e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.88e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;7.62e-10;31!UBERON:0006242;2.69e-08;1!UBERON:0000358;5.07e-08;1 | |||
|ontology_enrichment_disease=DOID:3493!9.11e-11!2;DOID:3119!8.95e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.77e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.77e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!6.72e-19!35;UBERON:0000160!9.07e-15!27;UBERON:0004921!1.34e-10!129;UBERON:0004185!1.34e-10!129;UBERON:0000059!3.49e-10!11;UBERON:0001007!4.54e-09!155;UBERON:0001555!4.54e-09!155;UBERON:0007026!4.54e-09!155;UBERON:0001155!2.92e-08!9;UBERON:0004119!6.35e-08!169;UBERON:0000925!6.35e-08!169;UBERON:0006595!6.35e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.16e-23;17!UBERON:0005409;3.32e-23;22!UBERON:0002108;1.36e-13;4!UBERON:0004921;2.85e-13;33!UBERON:0000059;3.67e-10;11!UBERON:0002423;1.65e-09;25!UBERON:0002107;5.52e-09;19!UBERON:0006925;5.52e-09;19!UBERON:0001301;6.46e-08;1!UBERON:0001155;2.12e-07;9!UBERON:0001007;4.36e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.10e-23,17;UBERON:0005409,2.18e-20,25;UBERON:0002108,1.36e-13,4;UBERON:0004921,3.40e-10,118;UBERON:0000059,3.50e-10,11;UBERON:0009497,1.66e-09,25;UBERON:0000015,1.66e-09,25;UBERON:0002423,1.66e-09,25;UBERON:0006235,1.66e-09,25;UBERON:0004161,1.66e-09,25;UBERON:0001007,4.99e-09,145;UBERON:0001555,4.99e-09,145;UBERON:0007026,4.99e-09,145;UBERON:0002107,5.47e-09,19;UBERON:0006925,5.47e-09,19;UBERON:0008836,5.47e-09,19;UBERON:0005172,6.30e-09,54;UBERON:0005173,6.30e-09,54;UBERON:0001301,6.24e-08,1;UBERON:0004119,6.69e-08,160;UBERON:0000925,6.69e-08,160;UBERON:0006595,6.69e-08,160;UBERON:0002417,6.76e-08,60;UBERON:0000916,6.76e-08,60;UBERON:0008835,9.87e-08,22;UBERON:0003894,9.87e-08,22;UBERON:0001155,2.05e-07,9;UBERON:0009854,2.19e-07,23;UBERON:0003929,4.84e-07,54;UBERON:0007499,8.92e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.492603536699674,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40545596294053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.8861076608028,2.94848165003288,8.27105869353966,0,6.51838724278502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.44936295511323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.13194867534758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05279459102193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.29377767385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,1.99052386215701,12.2956014659641,7.94339188413713,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,14.5188859258397,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0,0,0,0,0,0,8.1112138000954,0,0.576361668616424,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13395422361945,0,0,0,0,0,0,0,0,0,0,13.9486101919581,2.62272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,9.08623848804111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88571542958957,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.3540936860504,21.701390646844,0,0,1.1598144313382,0,0,0,0,0,0,0,25.8533429661615,24.4786707764432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,11.6385904913388,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0.502055437748735,0,0,0,0,13.473780315988,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.492603536699674,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40545596294053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.8861076608028,2.94848165003288,8.27105869353966,0,6.51838724278502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.44936295511323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.13194867534758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05279459102193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.29377767385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,1.99052386215701,12.2956014659641,7.94339188413713,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,14.5188859258397,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0,0,0,0,0,0,8.1112138000954,0,0.576361668616424,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13395422361945,0,0,0,0,0,0,0,0,0,0,13.9486101919581,2.62272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,9.08623848804111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88571542958957,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.3540936860504,21.701390646844,0,0,1.1598144313382,0,0,0,0,0,0,0,25.8533429661615,24.4786707764432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,11.6385904913388,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0.502055437748735,0,0,0,0,13.473780315988,2.34640942403454,0,0,0,0,0 | ||
|short_description=p1@CLRN3 | |||
}} | }} |
Latest revision as of 01:20, 17 September 2015
Short description: | p1@CLRN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLRN3_5end |
Coexpression cluster: | C579_small_argyrophil_colon_duodenum_signet_temporal_Intestinal |
Association with transcript: | 0bp_to_ENST00000368671, NM_152311, uc001lka.1_5end |
EntrezGene: | CLRN3 |
HGNC: | 20795 |
UniProt: | Q8NCR9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.88e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.10e-23 | 17 |
gastrointestinal system | 2.18e-20 | 25 |
small intestine | 1.36e-13 | 4 |
subdivision of digestive tract | 3.40e-10 | 118 |
large intestine | 3.50e-10 | 11 |
epithelium of foregut-midgut junction | 1.66e-09 | 25 |
anatomical boundary | 1.66e-09 | 25 |
hepatobiliary system | 1.66e-09 | 25 |
foregut-midgut junction | 1.66e-09 | 25 |
septum transversum | 1.66e-09 | 25 |
digestive system | 4.99e-09 | 145 |
digestive tract | 4.99e-09 | 145 |
primitive gut | 4.99e-09 | 145 |
liver | 5.47e-09 | 19 |
digestive gland | 5.47e-09 | 19 |
liver bud | 5.47e-09 | 19 |
abdomen element | 6.30e-09 | 54 |
abdominal segment element | 6.30e-09 | 54 |
epididymis | 6.24e-08 | 1 |
endoderm-derived structure | 6.69e-08 | 160 |
endoderm | 6.69e-08 | 160 |
presumptive endoderm | 6.69e-08 | 160 |
abdominal segment of trunk | 6.76e-08 | 60 |
abdomen | 6.76e-08 | 60 |
hepatic diverticulum | 9.87e-08 | 22 |
liver primordium | 9.87e-08 | 22 |
colon | 2.05e-07 | 9 |
digestive tract diverticulum | 2.19e-07 | 23 |
gut epithelium | 4.84e-07 | 54 |
epithelial sac | 8.92e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.77e-15 | 2 |